RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 WWC2Q6AWC2 1192 aa7.37□□□□□ -1.23
CLPX-202ENST00000558103 IGDCC3Q8IVU1 814 aa7.37□□□□□ -1.23
CLPX-202ENST00000558103 TEX2Q8IWB9 1127 aa7.37□□□□□ -1.23
CLPX-202ENST00000558103 SMCR8Q8TEV9 937 aaPredicted RBP7.37□□□□□ -1.23
CLPX-202ENST00000558103 MKL1Q969V6 931 aa7.37□□□□□ -1.23
CLPX-202ENST00000558103 SIGLEC10Q96LC7 697 aa7.37□□□□□ -1.23
CLPX-202ENST00000558103 OSBPL5Q9H0X9 879 aaPredicted RBP7.37□□□□□ -1.23
CLPX-202ENST00000558103 RXFP1Q9HBX9 757 aa7.37□□□□□ -1.23
CLPX-202ENST00000558103 HMG20BQ9P0W2 317 aa7.37□□□□□ -1.23
CLPX-202ENST00000558103 HDAC5Q9UQL6 1122 aa7.37□□□□□ -1.23
CLPX-202ENST00000558103 A0A0G2JMZ2 1700 aa7.37□□□□□ -1.23
CLPX-202ENST00000558103 A0A1W2PPC1 479 aa7.36□□□□□ -1.23
CLPX-202ENST00000558103 MAP4K4O95819 1239 aaPredicted RBP7.36□□□□□ -1.23
CLPX-202ENST00000558103 CAPN2P17655 700 aa7.36□□□□□ -1.23
CLPX-202ENST00000558103 RARSP54136 660 aaKnown RBP7.36□□□□□ -1.23
CLPX-202ENST00000558103 ZNF200P98182 395 aaPredicted RBP7.36□□□□□ -1.23
CLPX-202ENST00000558103 LSAMPQ13449 338 aa7.36□□□□□ -1.23
CLPX-202ENST00000558103 RRP1BQ14684 758 aaKnown RBP7.36□□□□□ -1.23
CLPX-202ENST00000558103 SLC9A5Q14940 896 aa7.36□□□□□ -1.23
CLPX-202ENST00000558103 C1QL4Q86Z23 238 aa7.36□□□□□ -1.23
CLPX-202ENST00000558103 ANKRD13CQ8N6S4 541 aa7.36□□□□□ -1.23
CLPX-202ENST00000558103 SPATA5Q8NB90 893 aa7.36□□□□□ -1.23
CLPX-202ENST00000558103 ARHGAP45Q92619 1136 aa7.36□□□□□ -1.23
CLPX-202ENST00000558103 TRMT2BQ96GJ1 504 aaKnown RBP7.36□□□□□ -1.23
CLPX-202ENST00000558103 DEFB118Q96PH6 123 aa7.36□□□□□ -1.23
CLPX-202ENST00000558103 PFDN2Q9UHV9 154 aa7.36□□□□□ -1.23
CLPX-202ENST00000558103 KCTD3Q9Y597 815 aa7.36□□□□□ -1.23
CLPX-202ENST00000558103 PCDHA2Q9Y5H9 948 aa7.36□□□□□ -1.23
CLPX-202ENST00000558103 IRAK3Q9Y616 596 aa7.36□□□□□ -1.23
CLPX-202ENST00000558103 X6R8D5 127 aa7.36□□□□□ -1.23
CLPX-202ENST00000558103 RLFQ13129 1914 aa7.36□□□□□ -1.23
CLPX-202ENST00000558103 LTBP2Q14767 1821 aa7.36□□□□□ -1.23
CLPX-202ENST00000558103 ZNF236Q9UL36 1845 aa7.36□□□□□ -1.23
CLPX-202ENST00000558103 MYH7P12883 1935 aa7.35□□□□□ -1.23
CLPX-202ENST00000558103 FAM221BA6H8Z2 402 aa7.35□□□□□ -1.23
CLPX-202ENST00000558103 GNAI3P08754 354 aa7.35□□□□□ -1.23
CLPX-202ENST00000558103 MCAMP43121 646 aa7.35□□□□□ -1.23
CLPX-202ENST00000558103 GCLCP48506 637 aaPredicted RBP7.35□□□□□ -1.23
CLPX-202ENST00000558103 NCKAP1LP55160 1127 aa7.35□□□□□ -1.23
CLPX-202ENST00000558103 SPP2Q13103 211 aa7.35□□□□□ -1.23
CLPX-202ENST00000558103 TARBP2Q15633 366 aaKnown RBP7.35□□□□□ -1.23
CLPX-202ENST00000558103 ZNF385BQ569K4 471 aa7.35□□□□□ -1.23
CLPX-202ENST00000558103 YOD1Q5VVQ6 348 aaPredicted RBP7.35□□□□□ -1.23
CLPX-202ENST00000558103 RSPO2Q6UXX9 243 aaPredicted RBP7.35□□□□□ -1.23
CLPX-202ENST00000558103 RIOX2Q8IUF8 465 aa7.35□□□□□ -1.23
CLPX-202ENST00000558103 LRRC56Q8IYG6 542 aaPredicted RBP7.35□□□□□ -1.23
CLPX-202ENST00000558103 Q8N1Y9 231 aa7.35□□□□□ -1.23
CLPX-202ENST00000558103 ZSCAN18Q8TBC5 510 aaPredicted RBP7.35□□□□□ -1.23
CLPX-202ENST00000558103 COA7Q96BR5 231 aa7.35□□□□□ -1.23
CLPX-202ENST00000558103 TSPAN17Q96FV3 270 aa7.35□□□□□ -1.23
CLPX-202ENST00000558103 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.35□□□□□ -1.23
CLPX-202ENST00000558103 DNAJC18Q9H819 358 aa7.35□□□□□ -1.23
CLPX-202ENST00000558103 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.35□□□□□ -1.23
CLPX-202ENST00000558103 GPR27Q9NS67 375 aa7.35□□□□□ -1.23
CLPX-202ENST00000558103 HERC5Q9UII4 1024 aaKnown RBP7.35□□□□□ -1.23
CLPX-202ENST00000558103 NR2E3Q9Y5X4 410 aa7.35□□□□□ -1.23
CLPX-202ENST00000558103 VCANP13611 3396 aa7.35□□□□□ -1.23
CLPX-202ENST00000558103 PRUNE2Q8WUY3 3088 aa7.34□□□□□ -1.23
CLPX-202ENST00000558103 PNMA6EA0A0J9YXQ4 647 aa7.34□□□□□ -1.23
CLPX-202ENST00000558103 BUB1BO60566 1050 aaPredicted RBP7.34□□□□□ -1.23
CLPX-202ENST00000558103 HMGCRP04035 888 aa7.34□□□□□ -1.23
CLPX-202ENST00000558103 LDHCP07864 332 aa7.34□□□□□ -1.23
CLPX-202ENST00000558103 TRIM27P14373 513 aa7.34□□□□□ -1.23
CLPX-202ENST00000558103 FPR2P25090 351 aa7.34□□□□□ -1.23
CLPX-202ENST00000558103 HMGCS2P54868 508 aa7.34□□□□□ -1.23
CLPX-202ENST00000558103 GSTO1P78417 241 aa7.34□□□□□ -1.23
CLPX-202ENST00000558103 SSRP1Q08945 709 aaKnown RBP7.34□□□□□ -1.23
CLPX-202ENST00000558103 SSPNQ14714 243 aa7.34□□□□□ -1.23
CLPX-202ENST00000558103 MROH9Q5TGP6 573 aa7.34□□□□□ -1.23
CLPX-202ENST00000558103 USP53Q70EK8 1073 aa7.34□□□□□ -1.23
CLPX-202ENST00000558103 SCUBE1Q8IWY4 988 aa7.34□□□□□ -1.23
CLPX-202ENST00000558103 TMEFF1Q8IYR6 380 aa7.34□□□□□ -1.23
CLPX-202ENST00000558103 PANK1Q8TE04 598 aa7.34□□□□□ -1.23
CLPX-202ENST00000558103 DIS3LQ8TF46 1054 aaKnown RBP7.34□□□□□ -1.23
CLPX-202ENST00000558103 DCAF4Q8WV16 495 aa7.34□□□□□ -1.23
CLPX-202ENST00000558103 TMEM169Q96HH4 297 aa7.34□□□□□ -1.23
CLPX-202ENST00000558103 PAWRQ96IZ0 340 aaKnown RBP7.34□□□□□ -1.23
CLPX-202ENST00000558103 NEUROD6Q96NK8 337 aa7.34□□□□□ -1.23
CLPX-202ENST00000558103 DEPDC7Q96QD5 511 aa7.34□□□□□ -1.23
CLPX-202ENST00000558103 DNAJC2Q99543 621 aaKnown RBP7.34□□□□□ -1.23
CLPX-202ENST00000558103 MORF4L1Q9UBU8 362 aa7.34□□□□□ -1.23
CLPX-202ENST00000558103 GJD2Q9UKL4 321 aa7.34□□□□□ -1.23
CLPX-202ENST00000558103 TNNQ9UQP3 1299 aa7.34□□□□□ -1.23
CLPX-202ENST00000558103 SIT1Q9Y3P8 196 aa7.34□□□□□ -1.23
CLPX-202ENST00000558103 COL11A1P12107 1806 aaPredicted RBP7.34□□□□□ -1.24
CLPX-202ENST00000558103 FLT1P17948 1338 aa7.33□□□□□ -1.24
CLPX-202ENST00000558103 ZNFX1Q9P2E3 1918 aaKnown RBP7.33□□□□□ -1.24
CLPX-202ENST00000558103 PLXNA1Q9UIW2 1896 aa7.33□□□□□ -1.24
CLPX-202ENST00000558103 H7BY64 318 aa7.33□□□□□ -1.24
CLPX-202ENST00000558103 NUAK1O60285 661 aa7.33□□□□□ -1.24
CLPX-202ENST00000558103 TFRCP02786 760 aaKnown RBP7.33□□□□□ -1.24
CLPX-202ENST00000558103 NCAM1P13591 858 aa7.33□□□□□ -1.24
CLPX-202ENST00000558103 PFKLP17858 780 aa7.33□□□□□ -1.24
CLPX-202ENST00000558103 IGFBP6P24592 240 aaPredicted RBP7.33□□□□□ -1.24
CLPX-202ENST00000558103 HOXA7P31268 230 aaPredicted RBP7.33□□□□□ -1.24
CLPX-202ENST00000558103 BACE1P56817 501 aa7.33□□□□□ -1.24
CLPX-202ENST00000558103 IFRD2Q12894 506 aaPredicted RBP7.33□□□□□ -1.24
CLPX-202ENST00000558103 PABPC4Q13310 644 aaKnown RBP eCLIP7.33□□□□□ -1.24
CLPX-202ENST00000558103 NTRK3Q16288 839 aa7.33□□□□□ -1.24
CLPX-202ENST00000558103 KRTAP19-4Q3LI73 84 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms