RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 SLC1A1P43005 524 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 KRT17Q04695 432 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 PPP3CAQ08209 521 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.41■□□□□ 0.38
SHMT2-231ENST00000557433 NOP9Q86U38 636 aaKnown RBP17.41■□□□□ 0.38
SHMT2-231ENST00000557433 CCDC25Q86WR0 208 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 ZNF653Q96CK0 615 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 KLHL29Q96CT2 875 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 TRAIPQ9BWF2 469 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 PRR12Q9ULL5 1215 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 AGAP1Q9UPQ3 857 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 PTPN22Q9Y2R2 807 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 ADGRA3Q8IWK6 1321 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 RBBP6Q7Z6E9 1792 aaKnown RBP17.41■□□□□ 0.38
SHMT2-231ENST00000557433 ANKRD63C9JTQ0 380 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 CHMP2AO43633 222 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 ATP5HO75947 161 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 VIL1P09327 827 aaKnown RBP17.41■□□□□ 0.38
SHMT2-231ENST00000557433 CDR2Q01850 454 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 CENPCQ03188 943 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 STRN3Q13033 797 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 NR1H3Q13133 447 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 NUGGCQ68CJ6 796 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 ZFPM1Q8IX07 1006 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 LXNQ9BS40 222 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 ZNF577Q9BSK1 485 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 MTFR1LQ9H019 292 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 AAASQ9NRG9 546 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 FGFR1OP2Q9NVK5 253 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 NKIRAS1Q9NYS0 192 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 KLHL14Q9P2G3 628 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 ASIC3Q9UHC3 531 aa17.41■□□□□ 0.38
SHMT2-231ENST00000557433 CDH16O75309 829 aa17.4■□□□□ 0.38
SHMT2-231ENST00000557433 SGPL1O95470 568 aa17.4■□□□□ 0.38
SHMT2-231ENST00000557433 SNAP25P60880 206 aa17.4■□□□□ 0.38
SHMT2-231ENST00000557433 LACTBP83111 547 aaPredicted RBP17.4■□□□□ 0.38
SHMT2-231ENST00000557433 FMO1Q01740 532 aa17.4■□□□□ 0.38
SHMT2-231ENST00000557433 ENPEPQ07075 957 aa17.4■□□□□ 0.38
SHMT2-231ENST00000557433 STAT4Q14765 748 aa17.4■□□□□ 0.38
SHMT2-231ENST00000557433 LONRF1Q17RB8 773 aa17.4■□□□□ 0.38
SHMT2-231ENST00000557433 ACAD10Q6JQN1 1059 aa17.4■□□□□ 0.38
SHMT2-231ENST00000557433 DAW1Q8N136 415 aa17.4■□□□□ 0.38
SHMT2-231ENST00000557433 UHMK1Q8TAS1 419 aaKnown RBP17.4■□□□□ 0.38
SHMT2-231ENST00000557433 TRIM11Q96F44 468 aa17.4■□□□□ 0.38
SHMT2-231ENST00000557433 RAB3IPQ96QF0 476 aaPredicted RBP17.4■□□□□ 0.38
SHMT2-231ENST00000557433 UNC45AQ9H3U1 944 aa17.4■□□□□ 0.38
SHMT2-231ENST00000557433 AVENQ9NQS1 362 aaPredicted RBP17.4■□□□□ 0.38
SHMT2-231ENST00000557433 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.4■□□□□ 0.38
SHMT2-231ENST00000557433 MRPL11Q9Y3B7 192 aaKnown RBP17.4■□□□□ 0.38
SHMT2-231ENST00000557433 COL2A1P02458 1487 aaPredicted RBP17.4■□□□□ 0.38
SHMT2-231ENST00000557433 TCRBV7S2A1N4TA0A589 114 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 DDTLA6NHG4 134 aaPredicted RBP17.39■□□□□ 0.37
SHMT2-231ENST00000557433 G3V3G9 751 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 ANP32DO95626 131 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 MYBL1P10243 752 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 CCNB1P14635 433 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 GCLMP48507 274 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 STAT2P52630 851 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 DLG4P78352 724 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 PTP4A2Q12974 167 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 RBM26Q5T8P6 1007 aaKnown RBP17.39■□□□□ 0.37
SHMT2-231ENST00000557433 DCAF8Q5TAQ9 597 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 PADI6Q6TGC4 694 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 ASRGL1Q7L266 308 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 PODNQ7Z5L7 613 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 RDH13Q8NBN7 331 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 TBC1D31Q96DN5 1066 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 HSPBP1Q9NZL4 362 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 COQ4Q9Y3A0 265 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 CD2APQ9Y5K6 639 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 ATRNL1Q5VV63 1379 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 IGF2BP3O00425 579 aaKnown RBP eCLIP17.39■□□□□ 0.37
SHMT2-231ENST00000557433 TP73O15350 636 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 ABHD2P08910 425 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 PLS3P13797 630 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 BRAFP15056 766 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 ATF2P15336 505 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 STX2P32856 288 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 ALDH5A1P51649 535 aaPredicted RBP17.39■□□□□ 0.37
SHMT2-231ENST00000557433 CCNG1P51959 295 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 ATP11AP98196 1134 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 CCDC38Q502W7 563 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 C1orf220Q5T0J3 134 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 ZNF746Q6NUN9 644 aaPredicted RBP17.39■□□□□ 0.37
SHMT2-231ENST00000557433 ENOSF1Q7L5Y1 443 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 USP37Q86T82 979 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 ANKRD35Q8N283 1001 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 ATL2Q8NHH9 583 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 FBF1Q8TES7 1133 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 NSMCE1Q8WV22 266 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 STAMBPL1Q96FJ0 436 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 TMEM117Q9H0C3 514 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 UBN1Q9NPG3 1134 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 FAM198AQ9UFP1 575 aa17.39■□□□□ 0.37
SHMT2-231ENST00000557433 ZBTB39O15060 712 aa17.38■□□□□ 0.37
SHMT2-231ENST00000557433 THAP12O43422 761 aa17.38■□□□□ 0.37
SHMT2-231ENST00000557433 ACSL3O95573 720 aa17.38■□□□□ 0.37
SHMT2-231ENST00000557433 CYP11B1P15538 503 aa17.38■□□□□ 0.37
SHMT2-231ENST00000557433 IVDP26440 423 aa17.38■□□□□ 0.37
SHMT2-231ENST00000557433 GTF2H1P32780 548 aa17.38■□□□□ 0.37
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