RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 HMMRO75330 724 aa6.54□□□□□ -1.36
ATXN3-245ENST00000556958 PARP1P09874 1014 aaKnown RBP6.54□□□□□ -1.36
ATXN3-245ENST00000556958 CHRNB1P11230 501 aa6.54□□□□□ -1.36
ATXN3-245ENST00000556958 PCP11498 1178 aaKnown RBP6.54□□□□□ -1.36
ATXN3-245ENST00000556958 EIF4BP23588 611 aaKnown RBP6.54□□□□□ -1.36
ATXN3-245ENST00000556958 GLUD2P49448 558 aa6.54□□□□□ -1.36
ATXN3-245ENST00000556958 MLLT6P55198 1093 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-245ENST00000556958 CREMQ03060 361 aa6.54□□□□□ -1.36
ATXN3-245ENST00000556958 ZNF423Q2M1K9 1284 aa6.54□□□□□ -1.36
ATXN3-245ENST00000556958 UAP1L1Q3KQV9 507 aa6.54□□□□□ -1.36
ATXN3-245ENST00000556958 PCNX4Q63HM2 1172 aa6.54□□□□□ -1.36
ATXN3-245ENST00000556958 ZNF385CQ66K41 422 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-245ENST00000556958 GPR65Q8IYL9 337 aa6.54□□□□□ -1.36
ATXN3-245ENST00000556958 TRMT2AQ8IZ69 625 aaKnown RBP6.54□□□□□ -1.36
ATXN3-245ENST00000556958 CHCHD4Q8N4Q1 142 aa6.54□□□□□ -1.36
ATXN3-245ENST00000556958 PNMA1Q8ND90 353 aa6.54□□□□□ -1.36
ATXN3-245ENST00000556958 URGCPQ8TCY9 931 aa6.54□□□□□ -1.36
ATXN3-245ENST00000556958 LRRN4Q8WUT4 740 aa6.54□□□□□ -1.36
ATXN3-245ENST00000556958 BCL7CQ8WUZ0 217 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-245ENST00000556958 MSANTD3Q96H12 275 aa6.54□□□□□ -1.36
ATXN3-245ENST00000556958 TMEM175Q9BSA9 504 aa6.54□□□□□ -1.36
ATXN3-245ENST00000556958 TRMT61BQ9BVS5 477 aaKnown RBP6.54□□□□□ -1.36
ATXN3-245ENST00000556958 KAT14Q9H8E8 782 aa6.54□□□□□ -1.36
ATXN3-245ENST00000556958 TRPV5Q9NQA5 729 aa6.54□□□□□ -1.36
ATXN3-245ENST00000556958 CHST12Q9NRB3 414 aa6.54□□□□□ -1.36
ATXN3-245ENST00000556958 TBC1D13Q9NVG8 400 aa6.54□□□□□ -1.36
ATXN3-245ENST00000556958 GDE1Q9NZC3 331 aa6.54□□□□□ -1.36
ATXN3-245ENST00000556958 ATG2AQ2TAZ0 1938 aa6.54□□□□□ -1.36
ATXN3-245ENST00000556958 GREB1LQ9C091 1923 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-245ENST00000556958 ATP9AO75110 1047 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 GPR32O75388 356 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 C1QL1O75973 258 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 KCNA2P16389 499 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 TMOD1P28289 359 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 NT5C2P49902 561 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 CREB5Q02930 508 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 HNRNPDQ14103 355 aaKnown RBP6.53□□□□□ -1.36
ATXN3-245ENST00000556958 ZNF484Q5JVG2 852 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 LIN9Q5TKA1 542 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 ZKSCAN2Q63HK3 967 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 TCEAL6Q6IPX3 200 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 LILRA6Q6PI73 481 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 ZNF280BQ86YH2 543 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 SYNPOQ8N3V7 929 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 TCEAL3Q969E4 200 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 ELSPBP1Q96BH3 223 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 PGBD4Q96DM1 585 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 HERC2P3Q9BVR0 1158 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 TRAIPQ9BWF2 469 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 APOL6Q9BWW8 343 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 VN1R3Q9BXE9 311 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 PRM3Q9NNZ6 103 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 ECHDC1Q9NTX5 307 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 FNIP2Q9P278 1114 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 POLIQ9UNA4 740 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 INPP5FQ9Y2H2 1132 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 RAXQ9Y2V3 346 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 PIAS3Q9Y6X2 628 aa6.53□□□□□ -1.36
ATXN3-245ENST00000556958 LOC400499M0QZD8 3231 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 LNP1A1A4G5 178 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 BCLAF3A2AJT9 711 aaKnown RBP6.52□□□□□ -1.37
ATXN3-245ENST00000556958 CDX4O14627 284 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-245ENST00000556958 NRP1O14786 923 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 OFD1O75665 1012 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 VTNP04004 478 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 CCNE1P24864 410 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 HOXA9P31269 272 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 PHKA2P46019 1235 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 NLRP11P59045 1033 aaKnown RBP6.52□□□□□ -1.37
ATXN3-245ENST00000556958 NTHL1P78549 312 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 DSG1Q02413 1049 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 LMAN2Q12907 356 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 MTMR1Q13613 665 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 GAS6Q14393 721 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 PLK5Q496M5 336 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 PPM1LQ5SGD2 360 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 AXDND1Q5T1B0 1012 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-245ENST00000556958 PDXDC1Q6P996 788 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 AGMOQ6ZNB7 445 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 MFSD6Q6ZSS7 791 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 IQCA1Q86XH1 822 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 ITPRIPQ8IWB1 547 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 FTSJ3Q8IY81 847 aaKnown RBP6.52□□□□□ -1.37
ATXN3-245ENST00000556958 ZNF843Q8N446 348 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 METTL13Q8N6R0 699 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 SMARCC2Q8TAQ2 1214 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 ITFG1Q8TB96 612 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 FAM200AQ8TCP9 573 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 ESR2Q92731 530 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 CUL5Q93034 780 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 GPATCH3Q96I76 525 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 MAP7D2Q96T17 732 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 PPP1R16BQ96T49 567 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 PCYT2Q99447 389 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 C8orf33Q9H7E9 229 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-245ENST00000556958 ZFP14Q9HCL3 533 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 JPH1Q9HDC5 661 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-245ENST00000556958 SLC9A2Q9UBY0 812 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 DNAJB4Q9UDY4 337 aa6.52□□□□□ -1.37
ATXN3-245ENST00000556958 MRPS23Q9Y3D9 190 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms