RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 STK10O94804 968 aaKnown RBP4.79□□□□□ -1.64
SRP54-207ENST00000555535 SEC24DO94855 1032 aaPredicted RBP4.79□□□□□ -1.64
SRP54-207ENST00000555535 PTX3P26022 381 aaPredicted RBP4.79□□□□□ -1.64
SRP54-207ENST00000555535 SSBP2P81877 361 aaPredicted RBP4.79□□□□□ -1.64
SRP54-207ENST00000555535 EIF2B5Q13144 721 aaKnown RBP4.79□□□□□ -1.64
SRP54-207ENST00000555535 LMBR1LQ6UX01 489 aa4.79□□□□□ -1.64
SRP54-207ENST00000555535 UNQ6494/PRO21346Q6UXR6 183 aa4.79□□□□□ -1.64
SRP54-207ENST00000555535 OR56A1Q8NGH5 318 aa4.79□□□□□ -1.64
SRP54-207ENST00000555535 CABP5Q9NP86 173 aa4.79□□□□□ -1.64
SRP54-207ENST00000555535 PCDH8O95206 1070 aa4.78□□□□□ -1.64
SRP54-207ENST00000555535 TKTP29401 623 aaKnown RBP4.78□□□□□ -1.64
SRP54-207ENST00000555535 FOXG1P55316 489 aaPredicted RBP4.78□□□□□ -1.64
SRP54-207ENST00000555535 TUBA4AP68366 448 aa4.78□□□□□ -1.64
SRP54-207ENST00000555535 MTX3Q5HYI7 312 aa4.78□□□□□ -1.64
SRP54-207ENST00000555535 CKAP2LQ8IYA6 745 aa4.78□□□□□ -1.64
SRP54-207ENST00000555535 RNF169Q8NCN4 708 aa4.78□□□□□ -1.64
SRP54-207ENST00000555535 MRPL4Q9BYD3 311 aaKnown RBP4.78□□□□□ -1.64
SRP54-207ENST00000555535 POFUT1Q9H488 388 aa4.78□□□□□ -1.64
SRP54-207ENST00000555535 KLHL11Q9NVR0 708 aa4.78□□□□□ -1.64
SRP54-207ENST00000555535 ZNF580Q9UK33 172 aa4.78□□□□□ -1.64
SRP54-207ENST00000555535 ST20-MTHFSA0A0A6YYL1 179 aa4.77□□□□□ -1.65
SRP54-207ENST00000555535 PTPDC1A2A3K4 754 aa4.77□□□□□ -1.65
SRP54-207ENST00000555535 DRGXA6NNA5 263 aa4.77□□□□□ -1.65
SRP54-207ENST00000555535 M0R2C6 588 aa4.77□□□□□ -1.65
SRP54-207ENST00000555535 PJA2O43164 708 aa4.77□□□□□ -1.65
SRP54-207ENST00000555535 GASTP01350 101 aa4.77□□□□□ -1.65
SRP54-207ENST00000555535 RUSC1-AS1Q66K80 236 aa4.77□□□□□ -1.65
SRP54-207ENST00000555535 ANKS6Q68DC2 871 aa4.77□□□□□ -1.65
SRP54-207ENST00000555535 MSL3Q8N5Y2 521 aaKnown RBP4.77□□□□□ -1.65
SRP54-207ENST00000555535 DDB2Q92466 427 aa4.77□□□□□ -1.65
SRP54-207ENST00000555535 DPF1Q92782 380 aa4.77□□□□□ -1.65
SRP54-207ENST00000555535 RGMAQ96B86 450 aa4.77□□□□□ -1.65
SRP54-207ENST00000555535 NEU1Q99519 415 aa4.77□□□□□ -1.65
SRP54-207ENST00000555535 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.77□□□□□ -1.65
SRP54-207ENST00000555535 KCTD5Q9NXV2 234 aa4.77□□□□□ -1.65
SRP54-207ENST00000555535 KDM2BQ8NHM5 1336 aa4.76□□□□□ -1.65
SRP54-207ENST00000555535 A0A1W2PR48 441 aa4.76□□□□□ -1.65
SRP54-207ENST00000555535 MANSC4A6NHS7 340 aaPredicted RBP4.76□□□□□ -1.65
SRP54-207ENST00000555535 H3BNC9 293 aa4.76□□□□□ -1.65
SRP54-207ENST00000555535 CHN2P52757 468 aa4.76□□□□□ -1.65
SRP54-207ENST00000555535 MEF2AQ02078 507 aaPredicted RBP4.76□□□□□ -1.65
SRP54-207ENST00000555535 SLC10A2Q12908 348 aaPredicted RBP4.76□□□□□ -1.65
SRP54-207ENST00000555535 LLGL1Q15334 1064 aa4.76□□□□□ -1.65
SRP54-207ENST00000555535 B3GNTL1Q67FW5 361 aaPredicted RBP4.76□□□□□ -1.65
SRP54-207ENST00000555535 RPL36ALQ969Q0 106 aaKnown RBP4.76□□□□□ -1.65
SRP54-207ENST00000555535 FERMT2Q96AC1 680 aa4.76□□□□□ -1.65
SRP54-207ENST00000555535 RNF31Q96EP0 1072 aa4.76□□□□□ -1.65
SRP54-207ENST00000555535 RNPEPQ9H4A4 650 aa4.76□□□□□ -1.65
SRP54-207ENST00000555535 CPNE5Q9HCH3 593 aa4.76□□□□□ -1.65
SRP54-207ENST00000555535 IL17RBQ9NRM6 502 aa4.76□□□□□ -1.65
SRP54-207ENST00000555535 ZNF521Q96K83 1311 aa4.75□□□□□ -1.65
SRP54-207ENST00000555535 FAM221BA6H8Z2 402 aa4.75□□□□□ -1.65
SRP54-207ENST00000555535 PEX1O43933 1283 aa4.75□□□□□ -1.65
SRP54-207ENST00000555535 ELANEP08246 267 aa4.75□□□□□ -1.65
SRP54-207ENST00000555535 ITPKBP27987 946 aa4.75□□□□□ -1.65
SRP54-207ENST00000555535 CXADRP78310 365 aa4.75□□□□□ -1.65
SRP54-207ENST00000555535 RASA3Q14644 834 aa4.75□□□□□ -1.65
SRP54-207ENST00000555535 NAALADL2Q58DX5 795 aa4.75□□□□□ -1.65
SRP54-207ENST00000555535 C19orf54Q5BKX5 351 aa4.75□□□□□ -1.65
SRP54-207ENST00000555535 FCRLBQ6BAA4 426 aa4.75□□□□□ -1.65
SRP54-207ENST00000555535 ZCCHC8Q6NZY4 707 aaKnown RBP4.75□□□□□ -1.65
SRP54-207ENST00000555535 GLB1L2Q8IW92 636 aa4.75□□□□□ -1.65
SRP54-207ENST00000555535 LNX2Q8N448 690 aa4.75□□□□□ -1.65
SRP54-207ENST00000555535 PTCD3Q96EY7 689 aaKnown RBP4.75□□□□□ -1.65
SRP54-207ENST00000555535 ZNF48Q96MX3 618 aaPredicted RBP4.75□□□□□ -1.65
SRP54-207ENST00000555535 SEMA4CQ9C0C4 833 aa4.75□□□□□ -1.65
SRP54-207ENST00000555535 SAMD15Q9P1V8 674 aa4.75□□□□□ -1.65
SRP54-207ENST00000555535 KCNE5Q9UJ90 142 aa4.75□□□□□ -1.65
SRP54-207ENST00000555535 CCDC9Q9Y3X0 531 aaKnown RBP4.75□□□□□ -1.65
SRP54-207ENST00000555535 SPO11Q9Y5K1 396 aa4.75□□□□□ -1.65
SRP54-207ENST00000555535 ZMYM3Q14202 1370 aa4.75□□□□□ -1.65
SRP54-207ENST00000555535 LTA4HP09960 611 aaKnown RBP4.74□□□□□ -1.65
SRP54-207ENST00000555535 SERINC3Q13530 473 aa4.74□□□□□ -1.65
SRP54-207ENST00000555535 ATXN7L2Q5T6C5 722 aaPredicted RBP4.74□□□□□ -1.65
SRP54-207ENST00000555535 TSHZ3Q63HK5 1081 aa4.74□□□□□ -1.65
SRP54-207ENST00000555535 ESRP1Q6NXG1 681 aaKnown RBP4.74□□□□□ -1.65
SRP54-207ENST00000555535 COLGALT2Q8IYK4 626 aa4.74□□□□□ -1.65
SRP54-207ENST00000555535 VGLL2Q8N8G2 317 aa4.74□□□□□ -1.65
SRP54-207ENST00000555535 GAB3Q8WWW8 586 aa4.74□□□□□ -1.65
SRP54-207ENST00000555535 ELF4Q99607 663 aaPredicted RBP4.74□□□□□ -1.65
SRP54-207ENST00000555535 WWOXQ9NZC7 414 aa4.74□□□□□ -1.65
SRP54-207ENST00000555535 SIRPGQ9P1W8 387 aa4.74□□□□□ -1.65
SRP54-207ENST00000555535 TBC1D30Q9Y2I9 924 aa4.74□□□□□ -1.65
SRP54-207ENST00000555535 WNT6Q9Y6F9 365 aa4.74□□□□□ -1.65
SRP54-207ENST00000555535 A0A1B0GTW7 788 aa4.73□□□□□ -1.65
SRP54-207ENST00000555535 TP73O15350 636 aa4.73□□□□□ -1.65
SRP54-207ENST00000555535 INSIG1O15503 277 aa4.73□□□□□ -1.65
SRP54-207ENST00000555535 MOSPD3O75425 235 aa4.73□□□□□ -1.65
SRP54-207ENST00000555535 FLT3LGP49771 235 aa4.73□□□□□ -1.65
SRP54-207ENST00000555535 RAPGEF1Q13905 1077 aa4.73□□□□□ -1.65
SRP54-207ENST00000555535 UBE3CQ15386 1083 aa4.73□□□□□ -1.65
SRP54-207ENST00000555535 SLC9A4Q6AI14 798 aa4.73□□□□□ -1.65
SRP54-207ENST00000555535 ESPNLQ6ZVH7 1005 aa4.73□□□□□ -1.65
SRP54-207ENST00000555535 FGD2Q7Z6J4 655 aa4.73□□□□□ -1.65
SRP54-207ENST00000555535 FUBP3Q96I24 572 aaKnown RBP eCLIP4.73□□□□□ -1.65
SRP54-207ENST00000555535 FDXACB1Q9BRP7 624 aaPredicted RBP4.73□□□□□ -1.65
SRP54-207ENST00000555535 VPS33BQ9H267 617 aa4.73□□□□□ -1.65
SRP54-207ENST00000555535 NRIP3Q9NQ35 241 aa4.73□□□□□ -1.65
SRP54-207ENST00000555535 ITGA10O75578 1167 aa4.72□□□□□ -1.65
SRP54-207ENST00000555535 GLRX3O76003 335 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms