RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 CORINQ9Y5Q5 1042 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 FLT1P17948 1338 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 PCDH11XQ9BZA7 1347 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 PCDH11YQ9BZA8 1340 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 TAF1P21675 1872 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 SLIT2O94813 1529 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 CICQ96RK0 1608 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 A0A1W2PQJ5 194 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 SPDYE3A6NKU9 549 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 H0YGN5 161 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 CHUKO15111 745 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 TLR2O60603 784 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 HTR3BO95264 441 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 ECEL1O95672 775 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 BPNT1O95861 308 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 PRLRP16471 622 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 KLRC1P26715 233 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 TNFRSF8P28908 595 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 ECHS1P30084 290 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 CDC25CP30307 473 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 ELF1P32519 619 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 RDXP35241 583 aaKnown RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 HSD17B3P37058 310 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 TECP42680 631 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 RCAN1P53805 252 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 ITIH3Q06033 890 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 BYSLQ13895 437 aaKnown RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 LRRC14Q15048 493 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 ASTE1Q2TB18 679 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 ACCSLQ4AC99 568 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 CFAP221Q4G0U5 840 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 PREPLQ4J6C6 727 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 BRDTQ58F21 947 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 FOXB2Q5VYV0 432 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 MAP1SQ66K74 1059 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 ARL6IP4Q66PJ3 421 aaKnown RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 HGSNATQ68CP4 663 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 CYB5D1Q6P9G0 228 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 HEATR3Q7Z4Q2 680 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 RNF180Q86T96 592 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 CABP7Q86V35 215 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 FUKQ8N0W3 1084 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 GIMAP7Q8NHV1 300 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 MDM1Q8TC05 714 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 TMEM40Q8WWA1 233 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 NINJ1Q92982 152 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 GJA10Q969M2 543 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 TBC1D31Q96DN5 1066 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 DHTKD1Q96HY7 919 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 NOX5Q96PH1 765 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 DNAJB12Q9NXW2 375 aaKnown RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 GABBR1Q9UBS5 961 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 ANAPC4Q9UJX5 808 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 ODF2LQ9ULJ1 636 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 PRR12Q9ULL5 1215 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 TPX2Q9ULW0 747 aaKnown RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 NFS1Q9Y697 457 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 COL1A1P02452 1464 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 C1orf167Q5SNV9 1468 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 DUOX1Q9NRD9 1551 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 ADAMTSL3P82987 1691 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 MROH5Q6ZUA9 1318 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 ATXN2Q99700 1313 aaKnown RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 MYH7BA7E2Y1 1941 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 A0A087X0T9 212 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 GOLGA6L7A0A1B0GV03 622 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 CCDC189A1A4V9 331 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 GRID2IPA4D2P6 1211 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 GMNCA6NCL1 334 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 MYMKA6NI61 221 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 KCNK3O14649 394 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 CYTH3O43739 400 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 CCNT1O60563 726 aaKnown RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 NOL4O94818 638 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 LCA5LO95447 670 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 FAM228BP0C875 321 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 GOLGA8HP0CJ92 632 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 ITGA4P13612 1032 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 LMNB1P20700 586 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 HNRNPH3P31942 346 aaKnown RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 CTNNA1P35221 906 aaKnown RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 TRAPPC10P48553 1259 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 CDK17Q00537 523 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 ZNF844Q08AG5 666 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 NEDD9Q14511 834 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 INPP5AQ14642 412 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 LETM2Q2VYF4 491 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 ODF2Q5BJF6 829 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 ANKRD20A8PQ5CZ79 823 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 UBAP2Q5T6F2 1119 aaKnown RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 SUSD4Q5VX71 490 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 OVOS1Q6IE37 1185 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 RCSD1Q6JBY9 416 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 PDXDC1Q6P996 788 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 UNC5AQ6ZN44 842 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 CCDC121Q6ZUS5 278 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 MICALCLQ6ZW33 695 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 CACNA2D4Q7Z3S7 1137 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 YTHDF3Q7Z739 585 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms