RNA–Protein interactions for RNA: ENST00000554397.5

LGMN-208, Transcript of legumain, humanhuman

TSL 4

Gene LGMN, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-208ENST00000554397 VN1R3Q9BXE9 311 aa17.45■□□□□ 0.38
LGMN-208ENST00000554397 EPHX3Q9H6B9 360 aa17.45■□□□□ 0.38
LGMN-208ENST00000554397 TOPORSQ9NS56 1045 aaPredicted RBP17.45■□□□□ 0.38
LGMN-208ENST00000554397 ARHGAP28Q9P2N2 729 aa17.45■□□□□ 0.38
LGMN-208ENST00000554397 CCDC39Q9UFE4 941 aa17.45■□□□□ 0.38
LGMN-208ENST00000554397 TNFSF13BQ9Y275 285 aa17.45■□□□□ 0.38
LGMN-208ENST00000554397 CLIC4Q9Y696 253 aa17.45■□□□□ 0.38
LGMN-208ENST00000554397 CASTOR2A6NHX0 329 aa17.44■□□□□ 0.38
LGMN-208ENST00000554397 TBCAO75347 108 aaKnown RBP17.44■□□□□ 0.38
LGMN-208ENST00000554397 FAM13AO94988 1023 aa17.44■□□□□ 0.38
LGMN-208ENST00000554397 EDN1P05305 212 aa17.44■□□□□ 0.38
LGMN-208ENST00000554397 ADH1AP07327 375 aa17.44■□□□□ 0.38
LGMN-208ENST00000554397 HARSP12081 509 aaKnown RBP17.44■□□□□ 0.38
LGMN-208ENST00000554397 PLCG1P19174 1290 aa17.44■□□□□ 0.38
LGMN-208ENST00000554397 MARCKSP29966 332 aaPredicted RBP17.44■□□□□ 0.38
LGMN-208ENST00000554397 RESTQ13127 1097 aa17.44■□□□□ 0.38
LGMN-208ENST00000554397 KCNC3Q14003 757 aa17.44■□□□□ 0.38
LGMN-208ENST00000554397 HSP90AA2PQ14568 343 aaPredicted RBP17.44■□□□□ 0.38
LGMN-208ENST00000554397 KARSQ15046 597 aaKnown RBP17.44■□□□□ 0.38
LGMN-208ENST00000554397 FUT10Q6P4F1 479 aa17.44■□□□□ 0.38
LGMN-208ENST00000554397 ELMSAN1Q6PJG2 1045 aa17.44■□□□□ 0.38
LGMN-208ENST00000554397 ZBTB33Q86T24 672 aa17.44■□□□□ 0.38
LGMN-208ENST00000554397 GSTCDQ8NEC7 633 aa17.44■□□□□ 0.38
LGMN-208ENST00000554397 BICD1Q96G01 975 aa17.44■□□□□ 0.38
LGMN-208ENST00000554397 ACO2Q99798 780 aaKnown RBP17.44■□□□□ 0.38
LGMN-208ENST00000554397 PHF7Q9BWX1 381 aaPredicted RBP17.44■□□□□ 0.38
LGMN-208ENST00000554397 ZHX3Q9H4I2 956 aa17.44■□□□□ 0.38
LGMN-208ENST00000554397 ZSCAN16Q9H4T2 348 aaPredicted RBP17.44■□□□□ 0.38
LGMN-208ENST00000554397 ANKFY1Q9P2R3 1169 aa17.44■□□□□ 0.38
LGMN-208ENST00000554397 ADAM28Q9UKQ2 775 aa17.44■□□□□ 0.38
LGMN-208ENST00000554397 NPHP3-ACAD11A0A0J9YXS1 232 aa17.43■□□□□ 0.38
LGMN-208ENST00000554397 DCXO43602 365 aa17.43■□□□□ 0.38
LGMN-208ENST00000554397 EPCAMP16422 314 aa17.43■□□□□ 0.38
LGMN-208ENST00000554397 OSTNP61366 133 aa17.43■□□□□ 0.38
LGMN-208ENST00000554397 GRIN1Q05586 938 aa17.43■□□□□ 0.38
LGMN-208ENST00000554397 ITIH3Q06033 890 aa17.43■□□□□ 0.38
LGMN-208ENST00000554397 MAPK7Q13164 816 aa17.43■□□□□ 0.38
LGMN-208ENST00000554397 RARS2Q5T160 578 aaKnown RBP17.43■□□□□ 0.38
LGMN-208ENST00000554397 FAM173BQ6P4H8 233 aa17.43■□□□□ 0.38
LGMN-208ENST00000554397 SYCE2Q6PIF2 218 aa17.43■□□□□ 0.38
LGMN-208ENST00000554397 HASPINQ8TF76 798 aa17.43■□□□□ 0.38
LGMN-208ENST00000554397 SPIRE2Q8WWL2 714 aa17.43■□□□□ 0.38
LGMN-208ENST00000554397 RABGGTAQ92696 567 aa17.43■□□□□ 0.38
LGMN-208ENST00000554397 SNX21Q969T3 373 aa17.43■□□□□ 0.38
LGMN-208ENST00000554397 NECTIN4Q96NY8 510 aa17.43■□□□□ 0.38
LGMN-208ENST00000554397 KLHL5Q96PQ7 755 aa17.43■□□□□ 0.38
LGMN-208ENST00000554397 TARS2Q9BW92 718 aaKnown RBP17.43■□□□□ 0.38
LGMN-208ENST00000554397 TSHZ2Q9NRE2 1034 aa17.43■□□□□ 0.38
LGMN-208ENST00000554397 ODF2LQ9ULJ1 636 aa17.43■□□□□ 0.38
LGMN-208ENST00000554397 MTMR6Q9Y217 621 aa17.43■□□□□ 0.38
LGMN-208ENST00000554397 SF3B1O75533 1304 aaKnown RBP eCLIP17.43■□□□□ 0.381e-7■■■■■ 172.3
LGMN-208ENST00000554397 TRIP11Q15643 1979 aa17.42■□□□□ 0.38
LGMN-208ENST00000554397 C19orf67A6NJJ6 358 aa17.42■□□□□ 0.38
LGMN-208ENST00000554397 PI4K2BG5E9Z4 385 aa17.42■□□□□ 0.38
LGMN-208ENST00000554397 CNPP09543 421 aaKnown RBP17.42■□□□□ 0.38
LGMN-208ENST00000554397 MCM6Q14566 821 aa17.42■□□□□ 0.38
LGMN-208ENST00000554397 USP41Q3LFD5 358 aa17.42■□□□□ 0.38
LGMN-208ENST00000554397 GLRA4Q5JXX5 417 aa17.42■□□□□ 0.38
LGMN-208ENST00000554397 TMEM31Q5JXX7 168 aa17.42■□□□□ 0.38
LGMN-208ENST00000554397 MPZL3Q6UWV2 235 aa17.42■□□□□ 0.38
LGMN-208ENST00000554397 MYCT1Q8N699 235 aa17.42■□□□□ 0.38
LGMN-208ENST00000554397 LARP4BQ92615 738 aaKnown RBP17.42■□□□□ 0.38
LGMN-208ENST00000554397 RAD54LQ92698 747 aa17.42■□□□□ 0.38
LGMN-208ENST00000554397 KHSRPQ92945 711 aaKnown RBP eCLIP17.42■□□□□ 0.38
LGMN-208ENST00000554397 FBXL18Q96ME1 805 aa17.42■□□□□ 0.38
LGMN-208ENST00000554397 RIPOR3Q96MK2 946 aa17.42■□□□□ 0.38
LGMN-208ENST00000554397 CDT1Q9H211 546 aa17.42■□□□□ 0.38
LGMN-208ENST00000554397 ADAM7Q9H2U9 754 aa17.42■□□□□ 0.38
LGMN-208ENST00000554397 SFXN1Q9H9B4 322 aa17.42■□□□□ 0.38
LGMN-208ENST00000554397 CACNG4Q9UBN1 327 aa17.42■□□□□ 0.38
LGMN-208ENST00000554397 DPP7Q9UHL4 492 aa17.42■□□□□ 0.38
LGMN-208ENST00000554397 CITO14578 2027 aa17.42■□□□□ 0.38
LGMN-208ENST00000554397 F8W810 466 aa17.41■□□□□ 0.38
LGMN-208ENST00000554397 K7ENM7 598 aa17.41■□□□□ 0.38
LGMN-208ENST00000554397 PTGESO14684 152 aa17.41■□□□□ 0.38
LGMN-208ENST00000554397 MCF2P10911 925 aa17.41■□□□□ 0.38
LGMN-208ENST00000554397 SP100P23497 879 aaPredicted RBP17.41■□□□□ 0.38
LGMN-208ENST00000554397 GRM5P41594 1212 aa17.41■□□□□ 0.38
LGMN-208ENST00000554397 MTHFRP42898 656 aa17.41■□□□□ 0.38
LGMN-208ENST00000554397 CREMQ03060 361 aa17.41■□□□□ 0.38
LGMN-208ENST00000554397 NOLC1Q14978 699 aaKnown RBP eCLIP17.41■□□□□ 0.38
LGMN-208ENST00000554397 SPECC1Q5M775 1068 aa17.41■□□□□ 0.38
LGMN-208ENST00000554397 TAS1R1Q7RTX1 841 aa17.41■□□□□ 0.38
LGMN-208ENST00000554397 TMEM161BQ8NDZ6 487 aa17.41■□□□□ 0.38
LGMN-208ENST00000554397 RIN2Q8WYP3 895 aaPredicted RBP17.41■□□□□ 0.38
LGMN-208ENST00000554397 SUSD6Q92537 303 aa17.41■□□□□ 0.38
LGMN-208ENST00000554397 ACAP3Q96P50 834 aa17.41■□□□□ 0.38
LGMN-208ENST00000554397 REEP2Q9BRK0 252 aa17.41■□□□□ 0.38
LGMN-208ENST00000554397 NTPCRQ9BSD7 190 aaKnown RBP17.41■□□□□ 0.38
LGMN-208ENST00000554397 CCSER1Q9C0I3 900 aa17.41■□□□□ 0.38
LGMN-208ENST00000554397 S1PR5Q9H228 398 aa17.41■□□□□ 0.38
LGMN-208ENST00000554397 PARVGQ9HBI0 331 aa17.41■□□□□ 0.38
LGMN-208ENST00000554397 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.41■□□□□ 0.38
LGMN-208ENST00000554397 NR2E1Q9Y466 385 aa17.41■□□□□ 0.38
LGMN-208ENST00000554397 FAM86C2PA6NEL3 165 aa17.4■□□□□ 0.38
LGMN-208ENST00000554397 TOM1L1O75674 476 aa17.4■□□□□ 0.38
LGMN-208ENST00000554397 GLUD1P00367 558 aa17.4■□□□□ 0.38
LGMN-208ENST00000554397 MAPTP10636 758 aaKnown RBP17.4■□□□□ 0.38
LGMN-208ENST00000554397 CLCN4P51793 760 aa17.4■□□□□ 0.38
LGMN-208ENST00000554397 DSG1Q02413 1049 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms