RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 TBX3O15119 743 aa8.59□□□□□ -1.03
ABCD4-220ENST00000553998 LAMTOR5O43504 91 aa8.59□□□□□ -1.03
ABCD4-220ENST00000553998 ZMYND10O75800 440 aa8.59□□□□□ -1.03
ABCD4-220ENST00000553998 POMCP01189 267 aa8.59□□□□□ -1.03
ABCD4-220ENST00000553998 POU2F2P09086 479 aa8.59□□□□□ -1.03
ABCD4-220ENST00000553998 RPS9P46781 194 aaKnown RBP8.59□□□□□ -1.03
ABCD4-220ENST00000553998 FZD5Q13467 585 aa8.59□□□□□ -1.03
ABCD4-220ENST00000553998 SLC44A4Q53GD3 710 aa8.59□□□□□ -1.03
ABCD4-220ENST00000553998 RILPL1Q5EBL4 403 aa8.59□□□□□ -1.03
ABCD4-220ENST00000553998 EARS2Q5JPH6 523 aaKnown RBP8.59□□□□□ -1.03
ABCD4-220ENST00000553998 SRGAP1Q7Z6B7 1085 aa8.59□□□□□ -1.03
ABCD4-220ENST00000553998 RHPN2Q8IUC4 686 aa8.59□□□□□ -1.03
ABCD4-220ENST00000553998 SMG8Q8ND04 991 aaKnown RBP8.59□□□□□ -1.03
ABCD4-220ENST00000553998 ATRIPQ8WXE1 791 aa8.59□□□□□ -1.03
ABCD4-220ENST00000553998 SECISBP2LQ93073 1101 aaKnown RBP8.59□□□□□ -1.03
ABCD4-220ENST00000553998 NELL2Q99435 816 aa8.59□□□□□ -1.03
ABCD4-220ENST00000553998 JPH2Q9BR39 696 aaPredicted RBP8.59□□□□□ -1.03
ABCD4-220ENST00000553998 FAM126AQ9BYI3 521 aaPredicted RBP8.59□□□□□ -1.03
ABCD4-220ENST00000553998 UNC45AQ9H3U1 944 aa8.59□□□□□ -1.03
ABCD4-220ENST00000553998 NCDNQ9UBB6 729 aa8.59□□□□□ -1.03
ABCD4-220ENST00000553998 DDX25Q9UHL0 483 aaKnown RBP8.59□□□□□ -1.03
ABCD4-220ENST00000553998 CDH7Q9ULB5 785 aa8.59□□□□□ -1.03
ABCD4-220ENST00000553998 MTF2Q9Y483 593 aaPredicted RBP8.59□□□□□ -1.03
ABCD4-220ENST00000553998 RBM19Q9Y4C8 960 aaKnown RBP8.59□□□□□ -1.03
ABCD4-220ENST00000553998 PPME1Q9Y570 386 aa8.59□□□□□ -1.03
ABCD4-220ENST00000553998 FAM170BA6NMN3 283 aa8.58□□□□□ -1.04
ABCD4-220ENST00000553998 C2CD2LO14523 706 aa8.58□□□□□ -1.04
ABCD4-220ENST00000553998 CCNT1O60563 726 aaKnown RBP8.58□□□□□ -1.04
ABCD4-220ENST00000553998 GAS7O60861 476 aa8.58□□□□□ -1.04
ABCD4-220ENST00000553998 TDP2O95551 362 aa8.58□□□□□ -1.04
ABCD4-220ENST00000553998 HNRNPA1P09651 372 aaKnown RBP eCLIP8.58□□□□□ -1.04
ABCD4-220ENST00000553998 FSHRP23945 695 aa8.58□□□□□ -1.04
ABCD4-220ENST00000553998 PFKPQ01813 784 aa8.58□□□□□ -1.04
ABCD4-220ENST00000553998 CSTF1Q05048 431 aaKnown RBP8.58□□□□□ -1.04
ABCD4-220ENST00000553998 SNW1Q13573 536 aaKnown RBP8.58□□□□□ -1.04
ABCD4-220ENST00000553998 PCBP1Q15365 356 aaKnown RBP eCLIP8.58□□□□□ -1.04
ABCD4-220ENST00000553998 MLF2Q15773 248 aaPredicted RBP8.58□□□□□ -1.04
ABCD4-220ENST00000553998 ST3GAL2Q16842 350 aa8.58□□□□□ -1.04
ABCD4-220ENST00000553998 USP41Q3LFD5 358 aa8.58□□□□□ -1.04
ABCD4-220ENST00000553998 MTERF2Q49AM1 385 aa8.58□□□□□ -1.04
ABCD4-220ENST00000553998 PARM1Q6UWI2 310 aa8.58□□□□□ -1.04
ABCD4-220ENST00000553998 ANO5Q75V66 913 aa8.58□□□□□ -1.04
ABCD4-220ENST00000553998 KSR1Q8IVT5 923 aa8.58□□□□□ -1.04
ABCD4-220ENST00000553998 EXOC8Q8IYI6 725 aa8.58□□□□□ -1.04
ABCD4-220ENST00000553998 FAM20AQ96MK3 541 aa8.58□□□□□ -1.04
ABCD4-220ENST00000553998 TEKT3Q9BXF9 490 aa8.58□□□□□ -1.04
ABCD4-220ENST00000553998 MINDY3Q9H8M7 445 aa8.58□□□□□ -1.04
ABCD4-220ENST00000553998 PIDD1Q9HB75 910 aa8.58□□□□□ -1.04
ABCD4-220ENST00000553998 KCNMB3Q9NPA1 279 aa8.58□□□□□ -1.04
ABCD4-220ENST00000553998 LTB4R2Q9NPC1 389 aa8.58□□□□□ -1.04
ABCD4-220ENST00000553998 PRMT8Q9NR22 394 aaPredicted RBP8.58□□□□□ -1.04
ABCD4-220ENST00000553998 SPATA6Q9NWH7 488 aaPredicted RBP8.58□□□□□ -1.04
ABCD4-220ENST00000553998 MIOSQ9NXC5 875 aa8.58□□□□□ -1.04
ABCD4-220ENST00000553998 SMG5Q9UPR3 1016 aaKnown RBP8.58□□□□□ -1.04
ABCD4-220ENST00000553998 CHD8Q9HCK8 2581 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 DCDC2BA2VCK2 349 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 TMEM150BA6NC51 233 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 FAM205CA6NFA0 338 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 ARL5CA6NH57 179 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 SHISA7A6NL88 538 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 SLC30A4O14863 429 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 ASAP2O43150 1006 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 NEMFO60524 1076 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 LRP3O75074 770 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 BMP15O95972 392 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 SPATA31D3P0C874 917 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 ZSCAN22P10073 491 aaPredicted RBP8.57□□□□□ -1.04
ABCD4-220ENST00000553998 TDGF1P13385 188 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 ITGA4P13612 1032 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 AXLP30530 894 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 HOXA9P31269 272 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 OR1G1P47890 313 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 NUCB2P80303 420 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 CREMQ03060 361 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 RESTQ13127 1097 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 TTC38Q5R3I4 469 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 ZBTB41Q5SVQ8 909 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 LRCH2Q5VUJ6 765 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 SPATA31D4Q6ZUB0 917 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 MTSS1LQ765P7 747 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 GET4Q7L5D6 327 aaPredicted RBP8.57□□□□□ -1.04
ABCD4-220ENST00000553998 MIER3Q7Z3K6 550 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 PALB2Q86YC2 1186 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 SLFN12Q8IYM2 578 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 ZNF687Q8N1G0 1237 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 SPRYD3Q8NCJ5 442 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 GSTCDQ8NEC7 633 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 ETNPPLQ8TBG4 499 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 PRPF31Q8WWY3 499 aaKnown RBP8.57□□□□□ -1.04
ABCD4-220ENST00000553998 FGF13Q92913 245 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 CCDC51Q96ER9 411 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 COLEC11Q9BWP8 271 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 GPR62Q9BZJ7 368 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 RNF39Q9H2S5 420 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 DHX33Q9H6R0 707 aaKnown RBP8.57□□□□□ -1.04
ABCD4-220ENST00000553998 PARD6AQ9NPB6 346 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 SEPT9Q9UHD8 586 aaPredicted RBP8.57□□□□□ -1.04
ABCD4-220ENST00000553998 FBXW11Q9UKB1 542 aa8.57□□□□□ -1.04
ABCD4-220ENST00000553998 CDV3Q9UKY7 258 aaKnown RBP8.57□□□□□ -1.04
ABCD4-220ENST00000553998 PRG3Q9Y2Y8 225 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms