RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 ECM1Q16610 540 aa16.68■□□□□ 0.26
SDR39U1-205ENST00000553546 USP41Q3LFD5 358 aa16.68■□□□□ 0.26
SDR39U1-205ENST00000553546 KIAA0319Q5VV43 1072 aa16.68■□□□□ 0.26
SDR39U1-205ENST00000553546 FUT10Q6P4F1 479 aa16.68■□□□□ 0.26
SDR39U1-205ENST00000553546 CYP26C1Q6V0L0 522 aa16.68■□□□□ 0.26
SDR39U1-205ENST00000553546 DTHD1Q6ZMT9 781 aa16.68■□□□□ 0.26
SDR39U1-205ENST00000553546 CCDC149Q6ZUS6 474 aa16.68■□□□□ 0.26
SDR39U1-205ENST00000553546 UBALD2Q8IYN6 164 aa16.68■□□□□ 0.26
SDR39U1-205ENST00000553546 ZDHHC14Q8IZN3 488 aa16.68■□□□□ 0.26
SDR39U1-205ENST00000553546 FBXL6Q8N531 539 aa16.68■□□□□ 0.26
SDR39U1-205ENST00000553546 CMASQ8NFW8 434 aaPredicted RBP16.68■□□□□ 0.26
SDR39U1-205ENST00000553546 ACSF2Q96CM8 615 aaPredicted RBP16.68■□□□□ 0.26
SDR39U1-205ENST00000553546 PRRX2Q99811 253 aa16.68■□□□□ 0.26
SDR39U1-205ENST00000553546 RXFP1Q9HBX9 757 aa16.68■□□□□ 0.26
SDR39U1-205ENST00000553546 CHST7Q9NS84 486 aa16.68■□□□□ 0.26
SDR39U1-205ENST00000553546 KLK14Q9P0G3 267 aa16.68■□□□□ 0.26
SDR39U1-205ENST00000553546 DNM3Q9UQ16 869 aa16.68■□□□□ 0.26
SDR39U1-205ENST00000553546 DCHS1Q96JQ0 3298 aa16.68■□□□□ 0.26
SDR39U1-205ENST00000553546 SF3B1O75533 1304 aaKnown RBP eCLIP16.68■□□□□ 0.26
SDR39U1-205ENST00000553546 CACNA1AO00555 2505 aa16.67■□□□□ 0.26
SDR39U1-205ENST00000553546 TEX28O15482 410 aa16.67■□□□□ 0.26
SDR39U1-205ENST00000553546 GFRA3O60609 400 aa16.67■□□□□ 0.26
SDR39U1-205ENST00000553546 THP07101 528 aa16.67■□□□□ 0.26
SDR39U1-205ENST00000553546 LIG1P18858 919 aa16.67■□□□□ 0.26
SDR39U1-205ENST00000553546 MCM2P49736 904 aa16.67■□□□□ 0.26
SDR39U1-205ENST00000553546 HSP90AA2PQ14568 343 aaPredicted RBP16.67■□□□□ 0.26
SDR39U1-205ENST00000553546 MCTP1Q6DN14 999 aa16.67■□□□□ 0.26
SDR39U1-205ENST00000553546 OTOP3Q7RTS5 596 aa16.67■□□□□ 0.26
SDR39U1-205ENST00000553546 TAS1R1Q7RTX1 841 aa16.67■□□□□ 0.26
SDR39U1-205ENST00000553546 KCTD17Q8N5Z5 321 aa16.67■□□□□ 0.26
SDR39U1-205ENST00000553546 KREMEN2Q8NCW0 462 aa16.67■□□□□ 0.26
SDR39U1-205ENST00000553546 HDAC7Q8WUI4 952 aa16.67■□□□□ 0.26
SDR39U1-205ENST00000553546 RHOBTB2Q9BYZ6 727 aa16.67■□□□□ 0.26
SDR39U1-205ENST00000553546 MAN1C1Q9NR34 630 aa16.67■□□□□ 0.26
SDR39U1-205ENST00000553546 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.67■□□□□ 0.26
SDR39U1-205ENST00000553546 SNTG2Q9NY99 539 aa16.67■□□□□ 0.26
SDR39U1-205ENST00000553546 CACNA1HO95180 2353 aa16.67■□□□□ 0.26
SDR39U1-205ENST00000553546 SPTBN4Q9H254 2564 aa16.66■□□□□ 0.26
SDR39U1-205ENST00000553546 TADA2AO75478 443 aa16.66■□□□□ 0.26
SDR39U1-205ENST00000553546 RECQL4O94761 1208 aa16.66■□□□□ 0.26
SDR39U1-205ENST00000553546 DMP1Q13316 513 aaPredicted RBP16.66■□□□□ 0.26
SDR39U1-205ENST00000553546 KANK3Q6NY19 840 aa16.66■□□□□ 0.26
SDR39U1-205ENST00000553546 ASIC4Q96FT7 647 aa16.66■□□□□ 0.26
SDR39U1-205ENST00000553546 TMX3Q96JJ7 454 aa16.66■□□□□ 0.26
SDR39U1-205ENST00000553546 DRC1Q96MC2 740 aa16.66■□□□□ 0.26
SDR39U1-205ENST00000553546 TIPINQ9BVW5 301 aa16.66■□□□□ 0.26
SDR39U1-205ENST00000553546 GPR62Q9BZJ7 368 aa16.66■□□□□ 0.26
SDR39U1-205ENST00000553546 PLEKHA4Q9H4M7 779 aa16.66■□□□□ 0.26
SDR39U1-205ENST00000553546 C17orf75Q9HAS0 396 aa16.66■□□□□ 0.26
SDR39U1-205ENST00000553546 FNIP2Q9P278 1114 aa16.66■□□□□ 0.26
SDR39U1-205ENST00000553546 C2orf16Q68DN1 1984 aa16.66■□□□□ 0.26
SDR39U1-205ENST00000553546 TTLL13PA6NNM8 815 aa16.65■□□□□ 0.26
SDR39U1-205ENST00000553546 F8W810 466 aa16.65■□□□□ 0.26
SDR39U1-205ENST00000553546 H3BQV1 296 aa16.65■□□□□ 0.26
SDR39U1-205ENST00000553546 K7ERI5 159 aa16.65■□□□□ 0.26
SDR39U1-205ENST00000553546 PTGESO14684 152 aa16.65■□□□□ 0.26
SDR39U1-205ENST00000553546 ELAVL2Q12926 359 aaKnown RBP16.65■□□□□ 0.26
SDR39U1-205ENST00000553546 ATF7IP2Q5U623 682 aa16.65■□□□□ 0.26
SDR39U1-205ENST00000553546 KIFC3Q9BVG8 833 aa16.65■□□□□ 0.26
SDR39U1-205ENST00000553546 TNFSF13BQ9Y275 285 aa16.65■□□□□ 0.26
SDR39U1-205ENST00000553546 ZFHX2Q9C0A1 2572 aaPredicted RBP16.65■□□□□ 0.26
SDR39U1-205ENST00000553546 MYO10Q9HD67 2058 aa16.65■□□□□ 0.26
SDR39U1-205ENST00000553546 CASTOR2A6NHX0 329 aa16.64■□□□□ 0.25
SDR39U1-205ENST00000553546 CCDC169A6NNP5 214 aa16.64■□□□□ 0.25
SDR39U1-205ENST00000553546 E9PMD0 336 aa16.64■□□□□ 0.25
SDR39U1-205ENST00000553546 GJB2P29033 226 aa16.64■□□□□ 0.25
SDR39U1-205ENST00000553546 ATP2C1P98194 919 aaPredicted RBP16.64■□□□□ 0.25
SDR39U1-205ENST00000553546 EEF1DP3Q658K8 133 aa16.64■□□□□ 0.25
SDR39U1-205ENST00000553546 PDXDC1Q6P996 788 aa16.64■□□□□ 0.25
SDR39U1-205ENST00000553546 RIN2Q8WYP3 895 aaPredicted RBP16.64■□□□□ 0.25
SDR39U1-205ENST00000553546 STAMQ92783 540 aa16.64■□□□□ 0.25
SDR39U1-205ENST00000553546 NT5C3AQ9H0P0 336 aa16.64■□□□□ 0.25
SDR39U1-205ENST00000553546 TMEM134Q9H6X4 195 aa16.64■□□□□ 0.25
SDR39U1-205ENST00000553546 KCNG1Q9UIX4 513 aa16.64■□□□□ 0.25
SDR39U1-205ENST00000553546 RBM19Q9Y4C8 960 aaKnown RBP16.64■□□□□ 0.25
SDR39U1-205ENST00000553546 MTCL1Q9Y4B5 1905 aaKnown RBP16.64■□□□□ 0.25
SDR39U1-205ENST00000553546 CCDC195A0A1B0GUA6 201 aa16.63■□□□□ 0.25
SDR39U1-205ENST00000553546 PP2D1A8MPX8 630 aa16.63■□□□□ 0.25
SDR39U1-205ENST00000553546 HIP1RO75146 1068 aa16.63■□□□□ 0.25
SDR39U1-205ENST00000553546 EDN1P05305 212 aa16.63■□□□□ 0.25
SDR39U1-205ENST00000553546 NPTX2P47972 431 aa16.63■□□□□ 0.25
SDR39U1-205ENST00000553546 PEX3P56589 373 aa16.63■□□□□ 0.25
SDR39U1-205ENST00000553546 NT5DC1Q5TFE4 455 aa16.63■□□□□ 0.25
SDR39U1-205ENST00000553546 ARL6IP4Q66PJ3 421 aaKnown RBP16.63■□□□□ 0.25
SDR39U1-205ENST00000553546 B3GALT6Q96L58 329 aa16.63■□□□□ 0.25
SDR39U1-205ENST00000553546 TTPALQ9BTX7 342 aa16.63■□□□□ 0.25
SDR39U1-205ENST00000553546 MRPL4Q9BYD3 311 aaKnown RBP16.63■□□□□ 0.25
SDR39U1-205ENST00000553546 KMT5AQ9NQR1 393 aa16.63■□□□□ 0.25
SDR39U1-205ENST00000553546 TOPORSQ9NS56 1045 aaPredicted RBP16.63■□□□□ 0.25
SDR39U1-205ENST00000553546 ZDHHC7Q9NXF8 308 aa16.63■□□□□ 0.25
SDR39U1-205ENST00000553546 LIMD1Q9UGP4 676 aa16.63■□□□□ 0.25
SDR39U1-205ENST00000553546 GDAQ9Y2T3 454 aa16.63■□□□□ 0.25
SDR39U1-205ENST00000553546 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.63■□□□□ 0.25
SDR39U1-205ENST00000553546 TGM5O43548 720 aa16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 KIF4AO95239 1232 aa16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 PAPLNO95428 1278 aa16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 BRD1O95696 1058 aa16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 GUCY2CP25092 1073 aa16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 YARSP54577 528 aaKnown RBP16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 VCPP55072 806 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms