RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 GJB4Q9NTQ9 266 aa11□□□□□ -0.65
ACTN1-208ENST00000553370 WRAP73Q9P2S5 460 aaPredicted RBP11□□□□□ -0.65
ACTN1-208ENST00000553370 PCDHA12Q9UN75 941 aa11□□□□□ -0.65
ACTN1-208ENST00000553370 HES2Q9Y543 173 aa11□□□□□ -0.65
ACTN1-208ENST00000553370 CACNA1IQ9P0X4 2223 aa10.99□□□□□ -0.65
ACTN1-208ENST00000553370 CCDC195A0A1B0GUA6 201 aa10.99□□□□□ -0.65
ACTN1-208ENST00000553370 FAM205CA6NFA0 338 aa10.99□□□□□ -0.65
ACTN1-208ENST00000553370 DTNBO60941 627 aa10.99□□□□□ -0.65
ACTN1-208ENST00000553370 LIG1P18858 919 aa10.99□□□□□ -0.65
ACTN1-208ENST00000553370 ATP2B1P20020 1258 aa10.99□□□□□ -0.65
ACTN1-208ENST00000553370 HOXA11P31270 313 aaPredicted RBP10.99□□□□□ -0.65
ACTN1-208ENST00000553370 TXKP42681 527 aa10.99□□□□□ -0.65
ACTN1-208ENST00000553370 PTENP60484 403 aa10.99□□□□□ -0.65
ACTN1-208ENST00000553370 NR5A1Q13285 461 aa10.99□□□□□ -0.65
ACTN1-208ENST00000553370 GNL2Q13823 731 aaKnown RBP10.99□□□□□ -0.65
ACTN1-208ENST00000553370 CAPSQ13938 189 aa10.99□□□□□ -0.65
ACTN1-208ENST00000553370 SAFBQ15424 915 aaKnown RBP eCLIP10.99□□□□□ -0.65
ACTN1-208ENST00000553370 UBXN11Q5T124 520 aa10.99□□□□□ -0.65
ACTN1-208ENST00000553370 SLC27A1Q6PCB7 646 aa10.99□□□□□ -0.65
ACTN1-208ENST00000553370 PALB2Q86YC2 1186 aa10.99□□□□□ -0.65
ACTN1-208ENST00000553370 SIX5Q8N196 739 aa10.99□□□□□ -0.65
ACTN1-208ENST00000553370 TMEM105Q8N8V8 129 aa10.99□□□□□ -0.65
ACTN1-208ENST00000553370 SMG8Q8ND04 991 aaKnown RBP10.99□□□□□ -0.65
ACTN1-208ENST00000553370 NXF3Q9H4D5 531 aaKnown RBP10.99□□□□□ -0.65
ACTN1-208ENST00000553370 TTC12Q9H892 705 aaPredicted RBP10.99□□□□□ -0.65
ACTN1-208ENST00000553370 IGSF9Q9P2J2 1179 aa10.99□□□□□ -0.65
ACTN1-208ENST00000553370 TPCN1Q9ULQ1 816 aa10.99□□□□□ -0.65
ACTN1-208ENST00000553370 CLUHO75153 1309 aa10.99□□□□□ -0.65
ACTN1-208ENST00000553370 ZBTB39O15060 712 aa10.98□□□□□ -0.65
ACTN1-208ENST00000553370 TEX28O15482 410 aa10.98□□□□□ -0.65
ACTN1-208ENST00000553370 TADA2AO75478 443 aa10.98□□□□□ -0.65
ACTN1-208ENST00000553370 CFHP08603 1231 aa10.98□□□□□ -0.65
ACTN1-208ENST00000553370 SPATA31D3P0C874 917 aa10.98□□□□□ -0.65
ACTN1-208ENST00000553370 AKAP5P24588 427 aa10.98□□□□□ -0.65
ACTN1-208ENST00000553370 CLCN5P51795 746 aa10.98□□□□□ -0.65
ACTN1-208ENST00000553370 AFF1P51825 1210 aaKnown RBP10.98□□□□□ -0.65
ACTN1-208ENST00000553370 MBTD1Q05BQ5 628 aa10.98□□□□□ -0.65
ACTN1-208ENST00000553370 GRIK3Q13003 919 aa10.98□□□□□ -0.65
ACTN1-208ENST00000553370 USP41Q3LFD5 358 aa10.98□□□□□ -0.65
ACTN1-208ENST00000553370 LIN9Q5TKA1 542 aa10.98□□□□□ -0.65
ACTN1-208ENST00000553370 SPATA31D4Q6ZUB0 917 aa10.98□□□□□ -0.65
ACTN1-208ENST00000553370 GET4Q7L5D6 327 aaPredicted RBP10.98□□□□□ -0.65
ACTN1-208ENST00000553370 MAEAQ7L5Y9 396 aa10.98□□□□□ -0.65
ACTN1-208ENST00000553370 COLGALT2Q8IYK4 626 aa10.98□□□□□ -0.65
ACTN1-208ENST00000553370 NECAB1Q8N987 351 aa10.98□□□□□ -0.65
ACTN1-208ENST00000553370 ERMNQ8TAM6 284 aa10.98□□□□□ -0.65
ACTN1-208ENST00000553370 KCNG4Q8TDN1 519 aa10.98□□□□□ -0.65
ACTN1-208ENST00000553370 ASAP3Q8TDY4 903 aa10.98□□□□□ -0.65
ACTN1-208ENST00000553370 RIN2Q8WYP3 895 aaPredicted RBP10.98□□□□□ -0.65
ACTN1-208ENST00000553370 RTP3Q9BQQ7 232 aa10.98□□□□□ -0.65
ACTN1-208ENST00000553370 ADPGKQ9BRR6 497 aa10.98□□□□□ -0.65
ACTN1-208ENST00000553370 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.98□□□□□ -0.65
ACTN1-208ENST00000553370 ANKEF1Q9NU02 776 aa10.98□□□□□ -0.65
ACTN1-208ENST00000553370 MARCH5Q9NX47 278 aa10.98□□□□□ -0.65
ACTN1-208ENST00000553370 KLK14Q9P0G3 267 aa10.98□□□□□ -0.65
ACTN1-208ENST00000553370 DUSP12Q9UNI6 340 aa10.98□□□□□ -0.65
ACTN1-208ENST00000553370 GIT1Q9Y2X7 761 aa10.98□□□□□ -0.65
ACTN1-208ENST00000553370 SF3B1O75533 1304 aaKnown RBP eCLIP10.98□□□□□ -0.656e-6■■■■■ 103.2
ACTN1-208ENST00000553370 PDCD11Q14690 1871 aaKnown RBP10.98□□□□□ -0.65
ACTN1-208ENST00000553370 ZNF292O60281 2723 aa10.97□□□□□ -0.65
ACTN1-208ENST00000553370 RFPL2O75678 378 aa10.97□□□□□ -0.65
ACTN1-208ENST00000553370 ARF4P18085 180 aaPredicted RBP10.97□□□□□ -0.65
ACTN1-208ENST00000553370 PRSS12P56730 875 aa10.97□□□□□ -0.65
ACTN1-208ENST00000553370 FUT10Q6P4F1 479 aa10.97□□□□□ -0.65
ACTN1-208ENST00000553370 FRMD5Q7Z6J6 570 aa10.97□□□□□ -0.65
ACTN1-208ENST00000553370 CDR2LQ86X02 465 aaPredicted RBP10.97□□□□□ -0.65
ACTN1-208ENST00000553370 DIS3L2Q8IYB7 885 aaKnown RBP10.97□□□□□ -0.65
ACTN1-208ENST00000553370 MCPH1Q8NEM0 835 aa10.97□□□□□ -0.65
ACTN1-208ENST00000553370 CMASQ8NFW8 434 aaPredicted RBP10.97□□□□□ -0.65
ACTN1-208ENST00000553370 PIGOQ8TEQ8 1089 aa10.97□□□□□ -0.65
ACTN1-208ENST00000553370 NKD2Q969F2 451 aaPredicted RBP10.97□□□□□ -0.65
ACTN1-208ENST00000553370 POM121Q96HA1 1249 aa10.97□□□□□ -0.65
ACTN1-208ENST00000553370 B3GALT6Q96L58 329 aa10.97□□□□□ -0.65
ACTN1-208ENST00000553370 KCNK12Q9HB15 430 aa10.97□□□□□ -0.65
ACTN1-208ENST00000553370 XPNPEP1Q9NQW7 623 aa10.97□□□□□ -0.65
ACTN1-208ENST00000553370 PRMT7Q9NVM4 692 aaPredicted RBP10.97□□□□□ -0.65
ACTN1-208ENST00000553370 ADAM28Q9UKQ2 775 aa10.97□□□□□ -0.65
ACTN1-208ENST00000553370 CA14Q9ULX7 337 aa10.97□□□□□ -0.65
ACTN1-208ENST00000553370 FANCMQ8IYD8 2048 aa10.97□□□□□ -0.65
ACTN1-208ENST00000553370 ARHGEF35A5YM69 484 aa10.96□□□□□ -0.65
ACTN1-208ENST00000553370 POTEMA6NI47 508 aa10.96□□□□□ -0.65
ACTN1-208ENST00000553370 N4BP3O15049 544 aa10.96□□□□□ -0.65
ACTN1-208ENST00000553370 B4GALT5O43286 388 aa10.96□□□□□ -0.65
ACTN1-208ENST00000553370 EIF5BO60841 1220 aaKnown RBP10.96□□□□□ -0.65
ACTN1-208ENST00000553370 SLITRK3O94933 977 aa10.96□□□□□ -0.65
ACTN1-208ENST00000553370 PDIA4P13667 645 aaKnown RBP10.96□□□□□ -0.65
ACTN1-208ENST00000553370 RPL17P18621 184 aaKnown RBP10.96□□□□□ -0.65
ACTN1-208ENST00000553370 ANAPC15P60006 121 aa10.96□□□□□ -0.65
ACTN1-208ENST00000553370 DSG1Q02413 1049 aa10.96□□□□□ -0.65
ACTN1-208ENST00000553370 SPIRE1Q08AE8 756 aa10.96□□□□□ -0.65
ACTN1-208ENST00000553370 PRPF4BQ13523 1007 aaKnown RBP10.96□□□□□ -0.65
ACTN1-208ENST00000553370 HSP90AA2PQ14568 343 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-208ENST00000553370 EARS2Q5JPH6 523 aaKnown RBP10.96□□□□□ -0.65
ACTN1-208ENST00000553370 CYP26C1Q6V0L0 522 aa10.96□□□□□ -0.65
ACTN1-208ENST00000553370 TAS1R1Q7RTX1 841 aa10.96□□□□□ -0.65
ACTN1-208ENST00000553370 APBB1IPQ7Z5R6 666 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-208ENST00000553370 CEP57Q86XR8 500 aa10.96□□□□□ -0.65
ACTN1-208ENST00000553370 DEPTORQ8TB45 409 aa10.96□□□□□ -0.65
ACTN1-208ENST00000553370 HASPINQ8TF76 798 aa10.96□□□□□ -0.65
ACTN1-208ENST00000553370 RABGGTAQ92696 567 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms