RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 TBC1D5Q92609 795 aa6.42□□□□□ -1.38
SMARCC2-213ENST00000552627 SHISA4Q96DD7 197 aa6.42□□□□□ -1.38
SMARCC2-213ENST00000552627 DDX11Q96FC9 970 aa6.42□□□□□ -1.38
SMARCC2-213ENST00000552627 DHRS1Q96LJ7 313 aa6.42□□□□□ -1.38
SMARCC2-213ENST00000552627 DEFB118Q96PH6 123 aa6.42□□□□□ -1.38
SMARCC2-213ENST00000552627 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.42□□□□□ -1.38
SMARCC2-213ENST00000552627 ADAMTS10Q9H324 1103 aa6.42□□□□□ -1.38
SMARCC2-213ENST00000552627 TMEM59LQ9UK28 342 aa6.42□□□□□ -1.38
SMARCC2-213ENST00000552627 PPT2Q9UMR5 302 aa6.42□□□□□ -1.38
SMARCC2-213ENST00000552627 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.42□□□□□ -1.38
SMARCC2-213ENST00000552627 WDR19Q8NEZ3 1342 aa6.42□□□□□ -1.38
SMARCC2-213ENST00000552627 ZBTB5O15062 677 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 ZBTB43O43298 467 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 HSP90AA1P07900 732 aaKnown RBP6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 HMGB1P09429 215 aaKnown RBP6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 PTGS1P23219 599 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 PSMA5P28066 241 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 CNGA1P29973 690 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 COPB2P35606 906 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 HK2P52789 917 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 STK3Q13188 491 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 BAATQ14032 418 aaPredicted RBP6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 TOB2Q14106 344 aaPredicted RBP6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 TKFCQ3LXA3 575 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 MAP3K21Q5TCX8 1036 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 FYB2Q5VWT5 728 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 MFSD14CQ5VZR4 134 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 OLFML2BQ68BL8 750 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 RNF207Q6ZRF8 634 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 TMTC3Q6ZXV5 915 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 RUFY3Q7L099 469 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 ABRAQ8N0Z2 381 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 FAM133AQ8N9E0 248 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 FANCBQ8NB91 859 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 SYTL5Q8TDW5 730 aaPredicted RBP6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 GPRASP2Q96D09 838 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 MTMR8Q96EF0 704 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 KIRREL1Q96J84 757 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 SLC6A18Q96N87 628 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 TM9SF2Q99805 663 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 TINF2Q9BSI4 451 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 MTA3Q9BTC8 594 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 RIOX1Q9H6W3 641 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 NCOA5Q9HCD5 579 aaKnown RBP6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 PDRG1Q9NUG6 133 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 CYP39A1Q9NYL5 469 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 COL20A1Q9P218 1284 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 FBXO40Q9UH90 709 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 CYP46A1Q9Y6A2 500 aa6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 KIAA0100Q14667 2235 aaKnown RBP6.41□□□□□ -1.38
SMARCC2-213ENST00000552627 FAM86C2PA6NEL3 165 aa6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 ADCY6O43306 1168 aa6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 EPB41L2O43491 1005 aaKnown RBP6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 SNAI1O95863 264 aaPredicted RBP6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 CALM1P0DP23 149 aa6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 CALM2P0DP24 149 aa6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 CALM3P0DP25 149 aa6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 CYBAP13498 195 aa6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 RAC2P15153 192 aa6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 HOXA13P31271 388 aaPredicted RBP6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 KIF5BP33176 963 aa6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 METAP2P50579 478 aaKnown RBP eCLIP6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 RPS6P62753 249 aaKnown RBP6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 CCT2P78371 535 aaKnown RBP6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 TMEM63BQ5T3F8 832 aa6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 OGFOD2Q6N063 350 aa6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 SYNE3Q6ZMZ3 975 aa6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 EEPD1Q7L9B9 569 aa6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 TMC3Q7Z5M5 1100 aa6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 TMTC2Q8N394 836 aa6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 TAB3Q8N5C8 712 aaPredicted RBP6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 RBBP8NLQ8NC74 664 aaPredicted RBP6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 DAGLBQ8NCG7 672 aa6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 DIS3LQ8TF46 1054 aaKnown RBP6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 U2AF1L4Q8WU68 220 aaKnown RBP6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 RRP36Q96EU6 259 aaKnown RBP6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 SPZ1Q9BXG8 430 aa6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 AMNQ9BXJ7 453 aa6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 KRTAP9-2Q9BYQ4 174 aa6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 MKRN2Q9H000 416 aaKnown RBP6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 SLC5A4Q9NY91 659 aa6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 ZHX1Q9UKY1 873 aaPredicted RBP6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 EFR3BQ9Y2G0 817 aa6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 PCDHA1Q9Y5I3 950 aa6.4□□□□□ -1.38
SMARCC2-213ENST00000552627 PFASO15067 1338 aa6.4□□□□□ -1.39
SMARCC2-213ENST00000552627 ABCB11O95342 1321 aa6.4□□□□□ -1.39
SMARCC2-213ENST00000552627 RPTORQ8N122 1335 aa6.4□□□□□ -1.39
SMARCC2-213ENST00000552627 BRCA2P51587 3418 aa6.4□□□□□ -1.39
SMARCC2-213ENST00000552627 ALPK3Q96L96 1907 aa6.39□□□□□ -1.39
SMARCC2-213ENST00000552627 LARGE1O95461 756 aa6.39□□□□□ -1.39
SMARCC2-213ENST00000552627 SGPL1O95470 568 aa6.39□□□□□ -1.39
SMARCC2-213ENST00000552627 CFBP00751 764 aa6.39□□□□□ -1.39
SMARCC2-213ENST00000552627 TFRCP02786 760 aaKnown RBP6.39□□□□□ -1.39
SMARCC2-213ENST00000552627 TPM2P07951 284 aa6.39□□□□□ -1.39
SMARCC2-213ENST00000552627 GJB1P08034 283 aa6.39□□□□□ -1.39
SMARCC2-213ENST00000552627 ACRP10323 421 aa6.39□□□□□ -1.39
SMARCC2-213ENST00000552627 PDIA3P30101 505 aaKnown RBP6.39□□□□□ -1.39
SMARCC2-213ENST00000552627 GJA8P48165 433 aa6.39□□□□□ -1.39
SMARCC2-213ENST00000552627 ALDH5A1P51649 535 aaPredicted RBP6.39□□□□□ -1.39
SMARCC2-213ENST00000552627 AK2P54819 239 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms