RNA–Protein interactions for RNA: ENST00000552555.1

DDX23-215, Transcript of DEAD-box helicase 23, human

TSL 4

Gene DDX23, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX23-215	ENST00000552555	LNX1	Q8TBB1	728 aa	Predicted RBP	11.13	□□□□□ -0.63
DDX23-215	ENST00000552555	ZBTB45	Q96K62	511 aa	Predicted RBP	11.13	□□□□□ -0.63
DDX23-215	ENST00000552555	CALR3	Q96L12	384 aa	Known RBP	11.13	□□□□□ -0.63
DDX23-215	ENST00000552555	NT5C1B	Q96P26	610 aa		11.13	□□□□□ -0.63
DDX23-215	ENST00000552555	NOX5	Q96PH1	765 aa		11.13	□□□□□ -0.63
DDX23-215	ENST00000552555	POP1	Q99575	1024 aa	Known RBP	11.13	□□□□□ -0.63
DDX23-215	ENST00000552555	TUT1	Q9H6E5	874 aa	Known RBP	11.13	□□□□□ -0.63
DDX23-215	ENST00000552555	SUGCT	Q9HAC7	445 aa		11.13	□□□□□ -0.63
DDX23-215	ENST00000552555	IFT122	Q9HBG6	1241 aa		11.13	□□□□□ -0.63
DDX23-215	ENST00000552555	ZFYVE28	Q9HCC9	887 aa		11.13	□□□□□ -0.63
DDX23-215	ENST00000552555	PRMT7	Q9NVM4	692 aa	Predicted RBP	11.13	□□□□□ -0.63
DDX23-215	ENST00000552555	CPSF3	Q9UKF6	684 aa	Known RBP	11.13	□□□□□ -0.63
DDX23-215	ENST00000552555	CAPN6	Q9Y6Q1	641 aa		11.13	□□□□□ -0.63
DDX23-215	ENST00000552555	MYH9	P35579	1960 aa	Known RBP	11.13	□□□□□ -0.63
DDX23-215	ENST00000552555	PLXNA1	Q9UIW2	1896 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	RRN3P2	A6NIE6	340 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	TTLL13P	A6NNM8	815 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	ADCY6	O43306	1168 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	LRRN2	O75325	713 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	F2	P00734	622 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	ATP1A1	P05023	1023 aa	Known RBP	11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	H2AFZ	P0C0S5	128 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	RGS2	P41220	211 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	WNT7B	P56706	349 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	NKX3-2	P78367	333 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	CDC42EP1	Q00587	391 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	TNFAIP2	Q03169	654 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	AMHR2	Q16671	573 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	KIAA0753	Q2KHM9	967 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	MARCH8	Q5T0T0	291 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	MTHFD1L	Q6UB35	978 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	MPZL3	Q6UWV2	235 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	H2AFV	Q71UI9	128 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	WDR49	Q8IV35	697 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	MNS1	Q8NEH6	495 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	OR6J1	Q8NGC5	347 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	UBE2Q2	Q8WVN8	375 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	TRAPPC12	Q8WVT3	735 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	TSC1	Q92574	1164 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	ALS2CR12	Q96Q35	445 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	FNBP1	Q96RU3	617 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	AGPAT1	Q99943	283 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	TOPORS	Q9NS56	1045 aa	Predicted RBP	11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	RBAK	Q9NYW8	714 aa	Predicted RBP	11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	FLRT1	Q9NZU1	646 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	TSKS	Q9UJT2	592 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	NOCT	Q9UK39	431 aa	Known RBP	11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	SNX12	Q9UMY4	172 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	CNTN6	Q9UQ52	1028 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	SAR1B	Q9Y6B6	198 aa		11.12	□□□□□ -0.63
DDX23-215	ENST00000552555	NCAN	O14594	1321 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	MACROD2	A1Z1Q3	448 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	MBLAC1	A4D2B0	266 aa	Predicted RBP	11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	HAS3	O00219	553 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	CA12	O43570	354 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	B4GALT4	O60513	344 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	MOCS3	O95396	460 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	VNN1	O95497	513 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	TMEM253	P0C7T8	217 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	PNMA6A	P0CW24	399 aa	Predicted RBP	11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	SRGAP2C	P0DJJ0	459 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	GZMA	P12544	262 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	TMOD1	P28289	359 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	PHKA2	P46019	1235 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	ACOT2	P49753	483 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	CLCN3	P51790	818 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	HADHB	P55084	474 aa	Known RBP	11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	ADAM17	P78536	824 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	ITIH3	Q06033	890 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	IFI16	Q16666	785 aa	Known RBP	11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	KYAT1	Q16773	422 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	ZBTB41	Q5SVQ8	909 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	ATF7IP2	Q5U623	682 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	TDRD10	Q5VZ19	366 aa	Known RBP	11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	MTERF4	Q7Z6M4	381 aa	Known RBP	11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	SLFN11	Q7Z7L1	901 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	ZNF410	Q86VK4	478 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	RHPN2	Q8IUC4	686 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	EPS8L1	Q8TE68	723 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	RABGGTA	Q92696	567 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	KAT5	Q92993	513 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	FAXDC2	Q96IV6	333 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	RPGRIP1	Q96KN7	1286 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	APBA2	Q99767	749 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	PACSIN1	Q9BY11	444 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	ISCU	Q9H1K1	167 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	PDE11A	Q9HCR9	933 aa		11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.11	□□□□□ -0.63
DDX23-215	ENST00000552555	PTPRJ	Q12913	1337 aa		11.1	□□□□□ -0.63
DDX23-215	ENST00000552555	CES2	O00748	559 aa		11.1	□□□□□ -0.63
DDX23-215	ENST00000552555	HLA-DRA	P01903	254 aa		11.1	□□□□□ -0.63
DDX23-215	ENST00000552555	DLAT	P10515	647 aa	Known RBP	11.1	□□□□□ -0.63
DDX23-215	ENST00000552555	MCF2	P10911	925 aa		11.1	□□□□□ -0.63
DDX23-215	ENST00000552555	H2AFX	P16104	143 aa	Predicted RBP	11.1	□□□□□ -0.63
DDX23-215	ENST00000552555	CHRNB2	P17787	502 aa		11.1	□□□□□ -0.63
DDX23-215	ENST00000552555	TCP1	P17987	556 aa	Known RBP	11.1	□□□□□ -0.63
DDX23-215	ENST00000552555	ACO1	P21399	889 aa	Known RBP	11.1	□□□□□ -0.63
DDX23-215	ENST00000552555	TNFAIP3	P21580	790 aa		11.1	□□□□□ -0.63
DDX23-215	ENST00000552555	HOXC8	P31273	242 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms