RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 POMKQ9H5K3 350 aa11.99□□□□□ -0.49
VTI1BP3-201ENST00000550220 PDZD7Q9H5P4 517 aa11.99□□□□□ -0.49
VTI1BP3-201ENST00000550220 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.99□□□□□ -0.49
VTI1BP3-201ENST00000550220 FNIP2Q9P278 1114 aa11.99□□□□□ -0.49
VTI1BP3-201ENST00000550220 ADAM28Q9UKQ2 775 aa11.99□□□□□ -0.49
VTI1BP3-201ENST00000550220 SORCS3Q9UPU3 1222 aa11.99□□□□□ -0.49
VTI1BP3-201ENST00000550220 PCDHB6Q9Y5E3 794 aa11.99□□□□□ -0.49
VTI1BP3-201ENST00000550220 SF3B1O75533 1304 aaKnown RBP eCLIP11.98□□□□□ -0.49
VTI1BP3-201ENST00000550220 C2CD2LO14523 706 aa11.98□□□□□ -0.49
VTI1BP3-201ENST00000550220 TEX28O15482 410 aa11.98□□□□□ -0.49
VTI1BP3-201ENST00000550220 SLC26A4O43511 780 aa11.98□□□□□ -0.49
VTI1BP3-201ENST00000550220 ATF7IP2Q5U623 682 aa11.98□□□□□ -0.49
VTI1BP3-201ENST00000550220 TMC5Q6UXY8 1006 aa11.98□□□□□ -0.49
VTI1BP3-201ENST00000550220 CDR2LQ86X02 465 aaPredicted RBP11.98□□□□□ -0.49
VTI1BP3-201ENST00000550220 FBXL6Q8N531 539 aa11.98□□□□□ -0.49
VTI1BP3-201ENST00000550220 C12orf76Q8N812 135 aaPredicted RBP11.98□□□□□ -0.49
VTI1BP3-201ENST00000550220 BSNDQ8WZ55 320 aa11.98□□□□□ -0.49
VTI1BP3-201ENST00000550220 TMX3Q96JJ7 454 aa11.98□□□□□ -0.49
VTI1BP3-201ENST00000550220 IRF2BPLQ9H1B7 796 aa11.98□□□□□ -0.49
VTI1BP3-201ENST00000550220 TMEM134Q9H6X4 195 aa11.98□□□□□ -0.49
VTI1BP3-201ENST00000550220 SNTG2Q9NY99 539 aa11.98□□□□□ -0.49
VTI1BP3-201ENST00000550220 KCND2Q9NZV8 630 aa11.98□□□□□ -0.49
VTI1BP3-201ENST00000550220 KLK14Q9P0G3 267 aa11.98□□□□□ -0.49
VTI1BP3-201ENST00000550220 TNFSF13BQ9Y275 285 aa11.98□□□□□ -0.49
VTI1BP3-201ENST00000550220 ATG2AQ2TAZ0 1938 aa11.98□□□□□ -0.49
VTI1BP3-201ENST00000550220 CCDC169A6NNP5 214 aa11.97□□□□□ -0.49
VTI1BP3-201ENST00000550220 C2CD4DB7Z1M9 353 aa11.97□□□□□ -0.49
VTI1BP3-201ENST00000550220 BMP15O95972 392 aa11.97□□□□□ -0.49
VTI1BP3-201ENST00000550220 LIG1P18858 919 aa11.97□□□□□ -0.49
VTI1BP3-201ENST00000550220 SCP2P22307 547 aa11.97□□□□□ -0.49
VTI1BP3-201ENST00000550220 SMTNP53814 917 aa11.97□□□□□ -0.49
VTI1BP3-201ENST00000550220 YARSP54577 528 aaKnown RBP11.97□□□□□ -0.49
VTI1BP3-201ENST00000550220 ATP2C1P98194 919 aaPredicted RBP11.97□□□□□ -0.49
VTI1BP3-201ENST00000550220 NBR1Q14596 966 aa11.97□□□□□ -0.49
VTI1BP3-201ENST00000550220 ECM1Q16610 540 aa11.97□□□□□ -0.49
VTI1BP3-201ENST00000550220 TAS1R1Q7RTX1 841 aa11.97□□□□□ -0.49
VTI1BP3-201ENST00000550220 KREMEN2Q8NCW0 462 aa11.97□□□□□ -0.49
VTI1BP3-201ENST00000550220 AK8Q96MA6 479 aa11.97□□□□□ -0.49
VTI1BP3-201ENST00000550220 UROC1Q96N76 676 aa11.97□□□□□ -0.49
VTI1BP3-201ENST00000550220 NTPCRQ9BSD7 190 aaKnown RBP11.97□□□□□ -0.49
VTI1BP3-201ENST00000550220 MRPL4Q9BYD3 311 aaKnown RBP11.97□□□□□ -0.49
VTI1BP3-201ENST00000550220 MAN1C1Q9NR34 630 aa11.97□□□□□ -0.49
VTI1BP3-201ENST00000550220 TOPORSQ9NS56 1045 aaPredicted RBP11.97□□□□□ -0.49
VTI1BP3-201ENST00000550220 ZDHHC7Q9NXF8 308 aa11.97□□□□□ -0.49
VTI1BP3-201ENST00000550220 SMC3Q9UQE7 1217 aa11.97□□□□□ -0.49
VTI1BP3-201ENST00000550220 MUC6Q6W4X9 2439 aa11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 CCDC195A0A1B0GUA6 201 aa11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 H0YCG3 227 aa11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 TRAPPC3O43617 180 aa11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 RECQL4O94761 1208 aa11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 PAPLNO95428 1278 aa11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 GUCY2CP25092 1073 aa11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 GJB2P29033 226 aa11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 NPTX2P47972 431 aa11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 PEX3P56589 373 aa11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 HYIQ5T013 277 aa11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 RINT1Q6NUQ1 792 aa11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 DCLRE1AQ6PJP8 1040 aa11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 C1orf186Q6ZWK4 172 aa11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 RIN2Q8WYP3 895 aaPredicted RBP11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 NXPE3Q969Y0 559 aa11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 ASIC4Q96FT7 647 aa11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 DDX27Q96GQ7 796 aaKnown RBP11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 CDK5RAP3Q96JB5 506 aa11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 TTPALQ9BTX7 342 aa11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 CCDC94Q9BW85 323 aaPredicted RBP11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 GPR62Q9BZJ7 368 aa11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 WDR6Q9NNW5 1121 aaKnown RBP11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 KMT5AQ9NQR1 393 aa11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 SLC38A7Q9NVC3 462 aa11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 IGSF9Q9P2J2 1179 aa11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 LIMD1Q9UGP4 676 aa11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.96□□□□□ -0.49
VTI1BP3-201ENST00000550220 PIEZO1Q92508 2521 aa11.96□□□□□ -0.5
VTI1BP3-201ENST00000550220 E9PMD0 336 aa11.95□□□□□ -0.5
VTI1BP3-201ENST00000550220 PTGESO14684 152 aa11.95□□□□□ -0.5
VTI1BP3-201ENST00000550220 TGM5O43548 720 aa11.95□□□□□ -0.5
VTI1BP3-201ENST00000550220 HIP1RO75146 1068 aa11.95□□□□□ -0.5
VTI1BP3-201ENST00000550220 WEE2P0C1S8 567 aa11.95□□□□□ -0.5
VTI1BP3-201ENST00000550220 SP100P23497 879 aaPredicted RBP11.95□□□□□ -0.5
VTI1BP3-201ENST00000550220 PTPN5P54829 565 aa11.95□□□□□ -0.5
VTI1BP3-201ENST00000550220 STRN3Q13033 797 aa11.95□□□□□ -0.5
VTI1BP3-201ENST00000550220 NT5DC1Q5TFE4 455 aa11.95□□□□□ -0.5
VTI1BP3-201ENST00000550220 LARP1BQ659C4 914 aaKnown RBP11.95□□□□□ -0.5
VTI1BP3-201ENST00000550220 RTL10Q7L3V2 364 aa11.95□□□□□ -0.5
VTI1BP3-201ENST00000550220 SYT2Q8N9I0 419 aaPredicted RBP11.95□□□□□ -0.5
VTI1BP3-201ENST00000550220 SPIRE2Q8WWL2 714 aa11.95□□□□□ -0.5
VTI1BP3-201ENST00000550220 PIK3R5Q8WYR1 880 aa11.95□□□□□ -0.5
VTI1BP3-201ENST00000550220 ACO2Q99798 780 aaKnown RBP11.95□□□□□ -0.5
VTI1BP3-201ENST00000550220 TCHPQ9BT92 498 aa11.95□□□□□ -0.5
VTI1BP3-201ENST00000550220 PIDD1Q9HB75 910 aa11.95□□□□□ -0.5
VTI1BP3-201ENST00000550220 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.95□□□□□ -0.5
VTI1BP3-201ENST00000550220 ARHGAP28Q9P2N2 729 aa11.95□□□□□ -0.5
VTI1BP3-201ENST00000550220 GDAQ9Y2T3 454 aa11.95□□□□□ -0.5
VTI1BP3-201ENST00000550220 TECTAO75443 2155 aa11.95□□□□□ -0.5
VTI1BP3-201ENST00000550220 CASTOR2A6NHX0 329 aa11.94□□□□□ -0.5
VTI1BP3-201ENST00000550220 TTLL13PA6NNM8 815 aa11.94□□□□□ -0.5
VTI1BP3-201ENST00000550220 TMEM189-UBE2V1I3L0A0 370 aa11.94□□□□□ -0.5
VTI1BP3-201ENST00000550220 B3GAT3O94766 335 aa11.94□□□□□ -0.5
VTI1BP3-201ENST00000550220 BRD1O95696 1058 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms