RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 TTLL13PA6NNM8 815 aa10.95□□□□□ -0.66
TRAFD1-207ENST00000550051 F8W810 466 aa10.95□□□□□ -0.66
TRAFD1-207ENST00000550051 INO80B-WBP1J3KQ70 363 aa10.95□□□□□ -0.66
TRAFD1-207ENST00000550051 CCNT1O60563 726 aaKnown RBP10.95□□□□□ -0.66
TRAFD1-207ENST00000550051 TADA2AO75478 443 aa10.95□□□□□ -0.66
TRAFD1-207ENST00000550051 DGAT1O75907 488 aa10.95□□□□□ -0.66
TRAFD1-207ENST00000550051 BAG4O95429 457 aaKnown RBP10.95□□□□□ -0.66
TRAFD1-207ENST00000550051 SP9P0CG40 484 aa10.95□□□□□ -0.66
TRAFD1-207ENST00000550051 XRCC6P12956 609 aaKnown RBP eCLIP10.95□□□□□ -0.66
TRAFD1-207ENST00000550051 TIE1P35590 1138 aa10.95□□□□□ -0.66
TRAFD1-207ENST00000550051 SCNN1GP51170 649 aa10.95□□□□□ -0.66
TRAFD1-207ENST00000550051 MBTD1Q05BQ5 628 aa10.95□□□□□ -0.66
TRAFD1-207ENST00000550051 DCLRE1AQ6PJP8 1040 aa10.95□□□□□ -0.66
TRAFD1-207ENST00000550051 ZC3H14Q6PJT7 736 aaKnown RBP10.95□□□□□ -0.66
TRAFD1-207ENST00000550051 TPH2Q8IWU9 490 aa10.95□□□□□ -0.66
TRAFD1-207ENST00000550051 SHDQ96IW2 340 aa10.95□□□□□ -0.66
TRAFD1-207ENST00000550051 ARHGEF3Q9NR81 526 aa10.95□□□□□ -0.66
TRAFD1-207ENST00000550051 DAXXQ9UER7 740 aaPredicted RBP10.95□□□□□ -0.66
TRAFD1-207ENST00000550051 EP300Q09472 2414 aaPredicted RBP10.95□□□□□ -0.66
TRAFD1-207ENST00000550051 MARCH6O60337 910 aa10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 PPP1R37O75864 691 aa10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 DCNP07585 359 aaKnown RBP10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 HNRNPA1P09651 372 aaKnown RBP eCLIP10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 MYBP10242 640 aa10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 XBP1P17861 261 aa10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 RFX1P22670 979 aa10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 FSHRP23945 695 aa10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 HOXA9P31269 272 aa10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 GRIK3Q13003 919 aa10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 CAPSQ13938 189 aa10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 CTTNQ14247 550 aaKnown RBP10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 SLC27A1Q6PCB7 646 aa10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 PJA1Q8NG27 643 aa10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 RIN2Q8WYP3 895 aaPredicted RBP10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 RMDN1Q96DB5 314 aa10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 B3GALT6Q96L58 329 aa10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 EIF2AK1Q9BQI3 630 aaKnown RBP10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 CLSTN3Q9BQT9 956 aa10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 DDX23Q9BUQ8 820 aaKnown RBP10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 TRIM6Q9C030 488 aaPredicted RBP10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 NXF3Q9H4D5 531 aaKnown RBP10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 CDH7Q9ULB5 785 aa10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 PCDHA12Q9UN75 941 aa10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 NUMBLQ9Y6R0 609 aa10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 R4GN57 208 aa10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 WDR87Q6ZQQ6 2873 aa10.94□□□□□ -0.66
TRAFD1-207ENST00000550051 CACNA1AO00555 2505 aa10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 STK36Q9NRP7 1315 aa10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 CDKL5O76039 1030 aa10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 GLULP15104 373 aa10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 GLRA2P23416 452 aa10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 AKAP5P24588 427 aa10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 GPC5P78333 572 aa10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 CYP4A11Q02928 519 aa10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 HSP90AA2PQ14568 343 aaPredicted RBP10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 PUM1Q14671 1186 aaKnown RBP eCLIP10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 UVSSAQ2YD98 709 aa10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 ZNF528Q3MIS6 628 aa10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 NCAPH2Q6IBW4 605 aa10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 PIK3AP1Q6ZUJ8 805 aa10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 RTL10Q7L3V2 364 aa10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 MAML2Q8IZL2 1156 aaPredicted RBP10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 LNX1Q8TBB1 728 aaPredicted RBP10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 OXER1Q8TDS5 423 aa10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 ASAP3Q8TDY4 903 aa10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 PIK3R5Q8WYR1 880 aa10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 RUBCNQ92622 972 aa10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 LARP6Q9BRS8 491 aaKnown RBP10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 RPP25Q9BUL9 199 aaKnown RBP10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 APOL6Q9BWW8 343 aa10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 OSBPL6Q9BZF3 934 aa10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 FBXW11Q9UKB1 542 aa10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 MYH15Q9Y2K3 1946 aa10.93□□□□□ -0.66
TRAFD1-207ENST00000550051 MIA3Q5JRA6 1907 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 SF3B1O75533 1304 aaKnown RBP eCLIP10.92□□□□□ -0.661e-7■■■■■ 31.2
TRAFD1-207ENST00000550051 KANSL1LA0AUZ9 987 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 B4GALT5O43286 388 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 POU2F2P09086 479 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 RPL17P18621 184 aaKnown RBP10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 RARRES1P49788 294 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 PRKCQQ04759 706 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 SCRN1Q12765 414 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 STK3Q13188 491 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 TUSC3Q13454 348 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 FAM187BQ17R55 369 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 EARS2Q5JPH6 523 aaKnown RBP10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 SPECC1Q5M775 1068 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 RTP2Q5QGT7 225 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 PDXDC1Q6P996 788 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 PRSS55Q6UWB4 352 aaPredicted RBP10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 PARM1Q6UWI2 310 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 RSPO2Q6UXX9 243 aaPredicted RBP10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 MTSS1LQ765P7 747 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 GET4Q7L5D6 327 aaPredicted RBP10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 GRASPQ7Z6J2 395 aaPredicted RBP10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 KIAA2013Q8IYS2 634 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 SUMF1Q8NBK3 374 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 FGF13Q92913 245 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 FGF14Q92915 247 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 PRIMPOLQ96LW4 560 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms