RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 PHF7Q9BWX1 381 aaPredicted RBP11.5□□□□□ -0.57
CCDC38-207ENST00000549752 NXF3Q9H4D5 531 aaKnown RBP11.5□□□□□ -0.57
CCDC38-207ENST00000549752 MRPL17Q9NRX2 175 aaKnown RBP11.5□□□□□ -0.57
CCDC38-207ENST00000549752 KCND2Q9NZV8 630 aa11.5□□□□□ -0.57
CCDC38-207ENST00000549752 DNAJB4Q9UDY4 337 aa11.5□□□□□ -0.57
CCDC38-207ENST00000549752 PARP2Q9UGN5 583 aa11.5□□□□□ -0.57
CCDC38-207ENST00000549752 RBM19Q9Y4C8 960 aaKnown RBP11.5□□□□□ -0.57
CCDC38-207ENST00000549752 HCFC2Q9Y5Z7 792 aa11.5□□□□□ -0.57
CCDC38-207ENST00000549752 VWA8A3KMH1 1905 aa11.49□□□□□ -0.57
CCDC38-207ENST00000549752 CLASP2O75122 1294 aaKnown RBP11.49□□□□□ -0.57
CCDC38-207ENST00000549752 CD2BP2O95400 341 aaKnown RBP11.49□□□□□ -0.57
CCDC38-207ENST00000549752 SOD2P04179 222 aa11.49□□□□□ -0.57
CCDC38-207ENST00000549752 MTHFRP42898 656 aa11.49□□□□□ -0.57
CCDC38-207ENST00000549752 SCNN1GP51170 649 aa11.49□□□□□ -0.57
CCDC38-207ENST00000549752 DSC1Q08554 894 aa11.49□□□□□ -0.57
CCDC38-207ENST00000549752 CBX2Q14781 532 aaPredicted RBP11.49□□□□□ -0.57
CCDC38-207ENST00000549752 HYIQ5T013 277 aa11.49□□□□□ -0.57
CCDC38-207ENST00000549752 KIAA1841Q6NSI8 718 aa11.49□□□□□ -0.57
CCDC38-207ENST00000549752 COLGALT2Q8IYK4 626 aa11.49□□□□□ -0.57
CCDC38-207ENST00000549752 GPR65Q8IYL9 337 aa11.49□□□□□ -0.57
CCDC38-207ENST00000549752 SUSD6Q92537 303 aa11.49□□□□□ -0.57
CCDC38-207ENST00000549752 CALML4Q96GE6 196 aa11.49□□□□□ -0.57
CCDC38-207ENST00000549752 RIPOR3Q96MK2 946 aa11.49□□□□□ -0.57
CCDC38-207ENST00000549752 EPHX3Q9H6B9 360 aa11.49□□□□□ -0.57
CCDC38-207ENST00000549752 CD320Q9NPF0 282 aa11.49□□□□□ -0.57
CCDC38-207ENST00000549752 NR2E1Q9Y466 385 aa11.49□□□□□ -0.57
CCDC38-207ENST00000549752 HES2Q9Y543 173 aa11.49□□□□□ -0.57
CCDC38-207ENST00000549752 VWA3AA6NCI4 1184 aa11.48□□□□□ -0.57
CCDC38-207ENST00000549752 CCDC169A6NNP5 214 aa11.48□□□□□ -0.57
CCDC38-207ENST00000549752 PRR33A8MZF0 331 aa11.48□□□□□ -0.57
CCDC38-207ENST00000549752 H0YCG3 227 aa11.48□□□□□ -0.57
CCDC38-207ENST00000549752 ADH1AP07327 375 aa11.48□□□□□ -0.57
CCDC38-207ENST00000549752 LIG1P18858 919 aa11.48□□□□□ -0.57
CCDC38-207ENST00000549752 COL9A1P20849 921 aa11.48□□□□□ -0.57
CCDC38-207ENST00000549752 SCP2P22307 547 aa11.48□□□□□ -0.57
CCDC38-207ENST00000549752 GUCY2CP25092 1073 aa11.48□□□□□ -0.57
CCDC38-207ENST00000549752 KLRC2P26717 231 aa11.48□□□□□ -0.57
CCDC38-207ENST00000549752 UBA7P41226 1012 aa11.48□□□□□ -0.57
CCDC38-207ENST00000549752 SMTNP53814 917 aa11.48□□□□□ -0.57
CCDC38-207ENST00000549752 CREMQ03060 361 aa11.48□□□□□ -0.57
CCDC38-207ENST00000549752 CUL4AQ13619 759 aa11.48□□□□□ -0.57
CCDC38-207ENST00000549752 PTPN14Q15678 1187 aa11.48□□□□□ -0.57
CCDC38-207ENST00000549752 ZRSR1Q15695 479 aaKnown RBP11.48□□□□□ -0.57
CCDC38-207ENST00000549752 ECM1Q16610 540 aa11.48□□□□□ -0.57
CCDC38-207ENST00000549752 ATF7IP2Q5U623 682 aa11.48□□□□□ -0.57
CCDC38-207ENST00000549752 RINT1Q6NUQ1 792 aa11.48□□□□□ -0.57
CCDC38-207ENST00000549752 TMEM173Q86WV6 379 aaPredicted RBP11.48□□□□□ -0.57
CCDC38-207ENST00000549752 ZFP42Q96MM3 310 aa11.48□□□□□ -0.57
CCDC38-207ENST00000549752 HERC2P3Q9BVR0 1158 aa11.48□□□□□ -0.57
CCDC38-207ENST00000549752 CCDC113Q9H0I3 377 aa11.48□□□□□ -0.57
CCDC38-207ENST00000549752 ADAM7Q9H2U9 754 aa11.48□□□□□ -0.57
CCDC38-207ENST00000549752 PDZD7Q9H5P4 517 aa11.48□□□□□ -0.57
CCDC38-207ENST00000549752 TMEM134Q9H6X4 195 aa11.48□□□□□ -0.57
CCDC38-207ENST00000549752 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.48□□□□□ -0.57
CCDC38-207ENST00000549752 TOPORSQ9NS56 1045 aaPredicted RBP11.48□□□□□ -0.57
CCDC38-207ENST00000549752 PRG3Q9Y2Y8 225 aaPredicted RBP11.48□□□□□ -0.57
CCDC38-207ENST00000549752 HCN4Q9Y3Q4 1203 aa11.48□□□□□ -0.57
CCDC38-207ENST00000549752 TCHHQ07283 1943 aa11.47□□□□□ -0.57
CCDC38-207ENST00000549752 SF3B1O75533 1304 aaKnown RBP eCLIP11.47□□□□□ -0.57
CCDC38-207ENST00000549752 LOC730098B7Z3J9 87 aa11.47□□□□□ -0.57
CCDC38-207ENST00000549752 E9PMD0 336 aa11.47□□□□□ -0.57
CCDC38-207ENST00000549752 C1RP00736 705 aa11.47□□□□□ -0.57
CCDC38-207ENST00000549752 SSBP05455 408 aaKnown RBP eCLIP11.47□□□□□ -0.57
CCDC38-207ENST00000549752 THP07101 528 aa11.47□□□□□ -0.57
CCDC38-207ENST00000549752 AKAP5P24588 427 aa11.47□□□□□ -0.57
CCDC38-207ENST00000549752 GLUD2P49448 558 aa11.47□□□□□ -0.57
CCDC38-207ENST00000549752 AFF1P51825 1210 aaKnown RBP11.47□□□□□ -0.57
CCDC38-207ENST00000549752 YARSP54577 528 aaKnown RBP11.47□□□□□ -0.57
CCDC38-207ENST00000549752 PEX3P56589 373 aa11.47□□□□□ -0.57
CCDC38-207ENST00000549752 ELAVL2Q12926 359 aaKnown RBP11.47□□□□□ -0.57
CCDC38-207ENST00000549752 STRN3Q13033 797 aa11.47□□□□□ -0.57
CCDC38-207ENST00000549752 TUSC3Q13454 348 aa11.47□□□□□ -0.57
CCDC38-207ENST00000549752 USP41Q3LFD5 358 aa11.47□□□□□ -0.57
CCDC38-207ENST00000549752 HERC4Q5GLZ8 1057 aaPredicted RBP11.47□□□□□ -0.57
CCDC38-207ENST00000549752 ATAT1Q5SQI0 421 aa11.47□□□□□ -0.57
CCDC38-207ENST00000549752 SYCE2Q6PIF2 218 aa11.47□□□□□ -0.57
CCDC38-207ENST00000549752 CABP7Q86V35 215 aa11.47□□□□□ -0.57
CCDC38-207ENST00000549752 RNF135Q8IUD6 432 aa11.47□□□□□ -0.57
CCDC38-207ENST00000549752 SYT2Q8N9I0 419 aaPredicted RBP11.47□□□□□ -0.57
CCDC38-207ENST00000549752 VN1R2Q8NFZ6 395 aa11.47□□□□□ -0.57
CCDC38-207ENST00000549752 RASSF8Q8NHQ8 419 aa11.47□□□□□ -0.57
CCDC38-207ENST00000549752 BSNDQ8WZ55 320 aa11.47□□□□□ -0.57
CCDC38-207ENST00000549752 INTS4Q96HW7 963 aaKnown RBP11.47□□□□□ -0.57
CCDC38-207ENST00000549752 LRFN3Q9BTN0 628 aa11.47□□□□□ -0.57
CCDC38-207ENST00000549752 MRPL4Q9BYD3 311 aaKnown RBP11.47□□□□□ -0.57
CCDC38-207ENST00000549752 BACH2Q9BYV9 841 aa11.47□□□□□ -0.57
CCDC38-207ENST00000549752 S1PR5Q9H228 398 aa11.47□□□□□ -0.57
CCDC38-207ENST00000549752 SFXN1Q9H9B4 322 aa11.47□□□□□ -0.57
CCDC38-207ENST00000549752 KMT5AQ9NQR1 393 aa11.47□□□□□ -0.57
CCDC38-207ENST00000549752 ADAM28Q9UKQ2 775 aa11.47□□□□□ -0.57
CCDC38-207ENST00000549752 PCDHGA4Q9Y5G9 962 aa11.47□□□□□ -0.57
CCDC38-207ENST00000549752 VPS37CA5D8V6 355 aaPredicted RBP11.46□□□□□ -0.57
CCDC38-207ENST00000549752 PP2D1A8MPX8 630 aa11.46□□□□□ -0.57
CCDC38-207ENST00000549752 HIP1RO75146 1068 aa11.46□□□□□ -0.57
CCDC38-207ENST00000549752 TADA2AO75478 443 aa11.46□□□□□ -0.57
CCDC38-207ENST00000549752 RECQL4O94761 1208 aa11.46□□□□□ -0.57
CCDC38-207ENST00000549752 CDC25AP30304 524 aa11.46□□□□□ -0.57
CCDC38-207ENST00000549752 ABCD1P33897 745 aa11.46□□□□□ -0.57
CCDC38-207ENST00000549752 LONP1P36776 959 aaKnown RBP11.46□□□□□ -0.57
CCDC38-207ENST00000549752 NPTX2P47972 431 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms