RNA–Protein interactions for RNA: ENST00000548620.1

USP15-209, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 3

Gene USP15, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-209ENST00000548620 PTPN21Q16825 1174 aa7.04□□□□□ -1.28
USP15-209ENST00000548620 FAM47AQ5JRC9 791 aa7.04□□□□□ -1.28
USP15-209ENST00000548620 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.04□□□□□ -1.28
USP15-209ENST00000548620 FBXO18Q8NFZ0 1043 aa7.04□□□□□ -1.28
USP15-209ENST00000548620 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.04□□□□□ -1.28
USP15-209ENST00000548620 NRG4Q8WWG1 115 aa7.04□□□□□ -1.28
USP15-209ENST00000548620 PLEKHG4BQ96PX9 1271 aa7.04□□□□□ -1.28
USP15-209ENST00000548620 UHRF1Q96T88 793 aaPredicted RBP7.04□□□□□ -1.28
USP15-209ENST00000548620 SMAD5Q99717 465 aaKnown RBP7.04□□□□□ -1.28
USP15-209ENST00000548620 SLC13A1Q9BZW2 595 aa7.04□□□□□ -1.28
USP15-209ENST00000548620 TBKBP1A7MCY6 615 aa7.03□□□□□ -1.28
USP15-209ENST00000548620 FAM171A2A8MVW0 826 aa7.03□□□□□ -1.28
USP15-209ENST00000548620 PRR5-ARHGAP8B1AHC4 643 aa7.03□□□□□ -1.28
USP15-209ENST00000548620 WASP42768 502 aa7.03□□□□□ -1.28
USP15-209ENST00000548620 PER3P56645 1201 aa7.03□□□□□ -1.28
USP15-209ENST00000548620 PTH1RQ03431 593 aa7.03□□□□□ -1.28
USP15-209ENST00000548620 Q8N1X5 172 aa7.03□□□□□ -1.28
USP15-209ENST00000548620 TEKT5Q96M29 485 aa7.03□□□□□ -1.28
USP15-209ENST00000548620 LANCL2Q9NS86 450 aa7.03□□□□□ -1.28
USP15-209ENST00000548620 PARPBPQ9NWS1 579 aa7.03□□□□□ -1.28
USP15-209ENST00000548620 hCG_2014768A0A024R1R8 64 aa7.02□□□□□ -1.29
USP15-209ENST00000548620 TACR2P21452 398 aa7.02□□□□□ -1.29
USP15-209ENST00000548620 ZXDAP98168 799 aa7.02□□□□□ -1.29
USP15-209ENST00000548620 SLC25A3Q00325 362 aa7.02□□□□□ -1.29
USP15-209ENST00000548620 SP140Q13342 867 aa7.02□□□□□ -1.29
USP15-209ENST00000548620 ODF1Q14990 250 aa7.02□□□□□ -1.29
USP15-209ENST00000548620 BMT2Q1RMZ1 405 aa7.02□□□□□ -1.29
USP15-209ENST00000548620 DRICH1Q6PGQ1 229 aaPredicted RBP7.02□□□□□ -1.29
USP15-209ENST00000548620 SLC35B2Q8TB61 432 aa7.02□□□□□ -1.29
USP15-209ENST00000548620 DPF2Q92785 391 aa7.02□□□□□ -1.29
USP15-209ENST00000548620 LDAHQ9H6V9 325 aa7.02□□□□□ -1.29
USP15-209ENST00000548620 CLCA2Q9UQC9 943 aa7.02□□□□□ -1.29
USP15-209ENST00000548620 MRFAP1Q9Y605 127 aa7.02□□□□□ -1.29
USP15-209ENST00000548620 CXorf49A8MYA2 514 aaPredicted RBP7.01□□□□□ -1.29
USP15-209ENST00000548620 PJA2O43164 708 aa7.01□□□□□ -1.29
USP15-209ENST00000548620 C6P13671 934 aa7.01□□□□□ -1.29
USP15-209ENST00000548620 PTTG1IPP53801 180 aa7.01□□□□□ -1.29
USP15-209ENST00000548620 RABL3Q5HYI8 236 aa7.01□□□□□ -1.29
USP15-209ENST00000548620 AFMIDQ63HM1 303 aa7.01□□□□□ -1.29
USP15-209ENST00000548620 SYT12Q8IV01 421 aa7.01□□□□□ -1.29
USP15-209ENST00000548620 SENP6Q9GZR1 1112 aaPredicted RBP7.01□□□□□ -1.29
USP15-209ENST00000548620 SPON1Q9HCB6 807 aa7.01□□□□□ -1.29
USP15-209ENST00000548620 AJAP1Q9UKB5 411 aaPredicted RBP7.01□□□□□ -1.29
USP15-209ENST00000548620 INTUQ9ULD6 942 aa7.01□□□□□ -1.29
USP15-209ENST00000548620 SPEF1Q9Y4P9 236 aa7.01□□□□□ -1.29
USP15-209ENST00000548620 IL2RBP14784 551 aa7□□□□□ -1.29
USP15-209ENST00000548620 FPR1P21462 350 aa7□□□□□ -1.29
USP15-209ENST00000548620 PCSK1P29120 753 aa7□□□□□ -1.29
USP15-209ENST00000548620 IGFL4Q6B9Z1 124 aa7□□□□□ -1.29
USP15-209ENST00000548620 PNMA8AQ86V59 439 aaPredicted RBP7□□□□□ -1.29
USP15-209ENST00000548620 RNF169Q8NCN4 708 aa7□□□□□ -1.29
USP15-209ENST00000548620 OR10H5Q8NGA6 315 aa7□□□□□ -1.29
USP15-209ENST00000548620 CASKIN2Q8WXE0 1202 aa7□□□□□ -1.29
USP15-209ENST00000548620 STON2Q8WXE9 905 aa7□□□□□ -1.29
USP15-209ENST00000548620 TFAP2CQ92754 450 aa7□□□□□ -1.29
USP15-209ENST00000548620 NDC1Q9BTX1 674 aa7□□□□□ -1.29
USP15-209ENST00000548620 CSRNP2Q9H175 543 aa7□□□□□ -1.29
USP15-209ENST00000548620 SORCS3Q9UPU3 1222 aa7□□□□□ -1.29
USP15-209ENST00000548620 LEFTY2O00292 366 aa6.99□□□□□ -1.29
USP15-209ENST00000548620 TRIM24O15164 1050 aa6.99□□□□□ -1.29
USP15-209ENST00000548620 FAM20BO75063 409 aa6.99□□□□□ -1.29
USP15-209ENST00000548620 AMY1AP04745 511 aa6.99□□□□□ -1.29
USP15-209ENST00000548620 SNRPA1P09661 255 aaKnown RBP6.99□□□□□ -1.29
USP15-209ENST00000548620 APOBEC3AP31941 199 aaPredicted RBP6.99□□□□□ -1.29
USP15-209ENST00000548620 ALDH1A3P47895 512 aa6.99□□□□□ -1.29
USP15-209ENST00000548620 SLC16A1P53985 500 aa6.99□□□□□ -1.29
USP15-209ENST00000548620 CLRN1P58418 232 aa6.99□□□□□ -1.29
USP15-209ENST00000548620 ANAPC15P60006 121 aa6.99□□□□□ -1.29
USP15-209ENST00000548620 EXOSC10Q01780 885 aaKnown RBP6.99□□□□□ -1.29
USP15-209ENST00000548620 TUBA3CQ13748 450 aa6.99□□□□□ -1.29
USP15-209ENST00000548620 LSM12Q3MHD2 195 aaKnown RBP6.99□□□□□ -1.29
USP15-209ENST00000548620 FNDC7Q5VTL7 733 aa6.99□□□□□ -1.29
USP15-209ENST00000548620 EFCAB12Q6NXP0 572 aa6.99□□□□□ -1.29
USP15-209ENST00000548620 TUBA3EQ6PEY2 450 aa6.99□□□□□ -1.29
USP15-209ENST00000548620 ZGPATQ8N5A5 531 aaKnown RBP6.99□□□□□ -1.29
USP15-209ENST00000548620 CCHCR1Q8TD31 782 aa6.99□□□□□ -1.29
USP15-209ENST00000548620 STAG1Q8WVM7 1258 aa6.99□□□□□ -1.29
USP15-209ENST00000548620 CYFIP2Q96F07 1278 aa6.99□□□□□ -1.29
USP15-209ENST00000548620 C7orf25Q9BPX7 421 aa6.99□□□□□ -1.29
USP15-209ENST00000548620 ZNF341Q9BYN7 854 aa6.99□□□□□ -1.29
USP15-209ENST00000548620 TMEM140Q9NV12 185 aa6.99□□□□□ -1.29
USP15-209ENST00000548620 TYW1Q9NV66 732 aaKnown RBP6.99□□□□□ -1.29
USP15-209ENST00000548620 MOCS1Q9NZB8 636 aa6.99□□□□□ -1.29
USP15-209ENST00000548620 SAP30BPQ9UHR5 308 aaKnown RBP6.99□□□□□ -1.29
USP15-209ENST00000548620 IPPQ9Y573 584 aa6.99□□□□□ -1.29
USP15-209ENST00000548620 PNPLA7Q6ZV29 1317 aa6.99□□□□□ -1.29
USP15-209ENST00000548620 NPIPB8E9PQR5 432 aa6.98□□□□□ -1.29
USP15-209ENST00000548620 HTRA2O43464 458 aaPredicted RBP6.98□□□□□ -1.29
USP15-209ENST00000548620 GPR32O75388 356 aa6.98□□□□□ -1.29
USP15-209ENST00000548620 ZRANB2O95218 330 aaKnown RBP eCLIP6.98□□□□□ -1.29
USP15-209ENST00000548620 PEX11BO96011 259 aa6.98□□□□□ -1.29
USP15-209ENST00000548620 NCLP19338 710 aaKnown RBP6.98□□□□□ -1.29
USP15-209ENST00000548620 EDNRBP24530 442 aa6.98□□□□□ -1.29
USP15-209ENST00000548620 IGBP1P78318 339 aa6.98□□□□□ -1.29
USP15-209ENST00000548620 ATP8B2P98198 1209 aa6.98□□□□□ -1.29
USP15-209ENST00000548620 MTM1Q13496 603 aa6.98□□□□□ -1.29
USP15-209ENST00000548620 EFCAB2Q5VUJ9 269 aa6.98□□□□□ -1.29
USP15-209ENST00000548620 ZFP28Q8NHY6 868 aa6.98□□□□□ -1.29
USP15-209ENST00000548620 COA7Q96BR5 231 aa6.98□□□□□ -1.29
USP15-209ENST00000548620 MRI1Q9BV20 369 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms