RNA–Protein interactions for RNA: ENST00000548620.1

USP15-209, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 3

Gene USP15, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-209ENST00000548620 AEBP2Q6ZN18 517 aaPredicted RBP29.73■■■□□ 2.35
USP15-209ENST00000548620 CHIC1Q5VXU3 224 aa28.98■■■□□ 2.23
USP15-209ENST00000548620 PHF23Q9BUL5 403 aaPredicted RBP25.51■■□□□ 1.67
USP15-209ENST00000548620 SENP3Q9H4L4 574 aaPredicted RBP25.2■■□□□ 1.62
USP15-209ENST00000548620 PLPPR3Q6T4P5 718 aa23.5■■□□□ 1.35
USP15-209ENST00000548620 FOXD1Q16676 465 aa23.41■■□□□ 1.34
USP15-209ENST00000548620 PPP6R1Q9UPN7 881 aa22.51■■□□□ 1.19
USP15-209ENST00000548620 ADRA2BP18089 450 aa22.47■■□□□ 1.19
USP15-209ENST00000548620 PIAS4Q8N2W9 510 aaPredicted RBP22.05■■□□□ 1.12
USP15-209ENST00000548620 MSH5O43196 834 aa21.57■■□□□ 1.04
USP15-209ENST00000548620 PPP4R3CPQ6ZMV5 832 aa20.71■□□□□ 0.91
USP15-209ENST00000548620 SCAF1Q9H7N4 1312 aaKnown RBP20.52■□□□□ 0.87
USP15-209ENST00000548620 MAPK8IP2Q13387 824 aaPredicted RBP20.4■□□□□ 0.86
USP15-209ENST00000548620 KCNA4P22459 653 aa20.21■□□□□ 0.83
USP15-209ENST00000548620 CNKSR2Q8WXI2 1034 aa20.13■□□□□ 0.81
USP15-209ENST00000548620 NCBP3Q53F19 620 aaKnown RBP20.12■□□□□ 0.81
USP15-209ENST00000548620 DMRT2Q9Y5R5 561 aa20.12■□□□□ 0.81
USP15-209ENST00000548620 NPM3O75607 178 aaKnown RBP19.88■□□□□ 0.77
USP15-209ENST00000548620 RNF216Q9NWF9 866 aaPredicted RBP19.75■□□□□ 0.75
USP15-209ENST00000548620 POTEDQ86YR6 584 aa19.72■□□□□ 0.75
USP15-209ENST00000548620 HOXD11P31277 338 aaPredicted RBP19.7■□□□□ 0.74
USP15-209ENST00000548620 DNAJC5BQ9UF47 199 aa19.33■□□□□ 0.68
USP15-209ENST00000548620 SLC4A1APQ9BWU0 796 aaKnown RBP19.21■□□□□ 0.67
USP15-209ENST00000548620 DCAF8L1A6NGE4 600 aa19.2■□□□□ 0.66
USP15-209ENST00000548620 SLC4A2P04920 1241 aa18.8■□□□□ 0.6
USP15-209ENST00000548620 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.72■□□□□ 0.59
USP15-209ENST00000548620 ZBTB22O15209 634 aa18.62■□□□□ 0.57
USP15-209ENST00000548620 EHMT2Q96KQ7 1210 aa18.62■□□□□ 0.57
USP15-209ENST00000548620 FOXD4L1Q9NU39 408 aa18.6■□□□□ 0.57
USP15-209ENST00000548620 RNF39Q9H2S5 420 aa18.5■□□□□ 0.55
USP15-209ENST00000548620 U3KPZ7 1027 aaPredicted RBP18.48■□□□□ 0.55
USP15-209ENST00000548620 CSRNP3Q8WYN3 585 aa18.47■□□□□ 0.55
USP15-209ENST00000548620 MYCNP04198 464 aaPredicted RBP18.35■□□□□ 0.53
USP15-209ENST00000548620 C1QBPQ07021 282 aaKnown RBP18.26■□□□□ 0.51
USP15-209ENST00000548620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.17■□□□□ 0.5
USP15-209ENST00000548620 HNRNPUL2Q1KMD3 747 aaKnown RBP18.17■□□□□ 0.5
USP15-209ENST00000548620 SAMD1Q6SPF0 538 aaPredicted RBP18.12■□□□□ 0.49
USP15-209ENST00000548620 CACNB1Q02641 598 aaPredicted RBP18■□□□□ 0.47
USP15-209ENST00000548620 APLP2Q06481 763 aa17.98■□□□□ 0.47
USP15-209ENST00000548620 SPINK5Q9NQ38 1064 aaPredicted RBP17.96■□□□□ 0.47
USP15-209ENST00000548620 ATXN8OSP0DMR3 200 aa17.94■□□□□ 0.46
USP15-209ENST00000548620 ATF5Q9Y2D1 282 aaPredicted RBP17.89■□□□□ 0.45
USP15-209ENST00000548620 CAPN15O75808 1086 aa17.86■□□□□ 0.45
USP15-209ENST00000548620 TRHP20396 242 aaPredicted RBP17.76■□□□□ 0.43
USP15-209ENST00000548620 ZNF219Q9P2Y4 722 aaPredicted RBP17.76■□□□□ 0.43
USP15-209ENST00000548620 DSG3P32926 999 aa17.6■□□□□ 0.41
USP15-209ENST00000548620 ABCB7O75027 752 aa17.52■□□□□ 0.4
USP15-209ENST00000548620 POLA2Q14181 598 aa17.48■□□□□ 0.39
USP15-209ENST00000548620 ZBTB12Q9Y330 459 aaPredicted RBP17.17■□□□□ 0.34
USP15-209ENST00000548620 MKRN4PQ13434 485 aaPredicted RBP17.12■□□□□ 0.33
USP15-209ENST00000548620 FBLN2P98095 1184 aa17.09■□□□□ 0.33
USP15-209ENST00000548620 OSCARQ8IYS5 282 aa16.9■□□□□ 0.3
USP15-209ENST00000548620 RBM42Q9BTD8 480 aaKnown RBP16.74■□□□□ 0.27
USP15-209ENST00000548620 SPDYE2BA6NHP3 402 aa16.72■□□□□ 0.27
USP15-209ENST00000548620 SPDYE6P0CI01 402 aa16.72■□□□□ 0.27
USP15-209ENST00000548620 SPDYE2Q495Y8 402 aa16.72■□□□□ 0.27
USP15-209ENST00000548620 SPDYE4A6NLX3 237 aa16.68■□□□□ 0.26
USP15-209ENST00000548620 FKBP8Q14318 412 aa16.67■□□□□ 0.26
USP15-209ENST00000548620 ZNF692Q9BU19 519 aaPredicted RBP16.64■□□□□ 0.25
USP15-209ENST00000548620 SSUH2Q9Y2M2 353 aa16.62■□□□□ 0.25
USP15-209ENST00000548620 AKT1S1Q96B36 256 aa16.54■□□□□ 0.24
USP15-209ENST00000548620 PROM2Q8N271 834 aa16.44■□□□□ 0.22
USP15-209ENST00000548620 PABPN1Q86U42 306 aaKnown RBP eCLIP16.43■□□□□ 0.22
USP15-209ENST00000548620 REM2Q8IYK8 340 aaPredicted RBP16.39■□□□□ 0.21
USP15-209ENST00000548620 SPDYE1Q8NFV5 336 aaPredicted RBP16.23■□□□□ 0.19
USP15-209ENST00000548620 PITPNM1O00562 1244 aa16.21■□□□□ 0.19
USP15-209ENST00000548620 CLEC11AQ9Y240 323 aa16.15■□□□□ 0.18
USP15-209ENST00000548620 STAG3Q9UJ98 1225 aa16.13■□□□□ 0.17
USP15-209ENST00000548620 CHRDL2Q6WN34 429 aa16.07■□□□□ 0.16
USP15-209ENST00000548620 FBXO3Q9UK99 471 aa16.07■□□□□ 0.16
USP15-209ENST00000548620 PRR29P0C7W0 189 aa16■□□□□ 0.15
USP15-209ENST00000548620 FXR2P51116 673 aaKnown RBP eCLIP15.91■□□□□ 0.14
USP15-209ENST00000548620 VASPP50552 380 aaPredicted RBP15.88■□□□□ 0.13
USP15-209ENST00000548620 PIP4P2Q8N4L2 257 aa15.87■□□□□ 0.13
USP15-209ENST00000548620 CREBZFQ9NS37 354 aa15.83■□□□□ 0.12
USP15-209ENST00000548620 MIER1Q8N108 512 aa15.8■□□□□ 0.12
USP15-209ENST00000548620 PRKAR2AP13861 404 aaKnown RBP15.78■□□□□ 0.12
USP15-209ENST00000548620 CHADLQ6NUI6 762 aa15.78■□□□□ 0.12
USP15-209ENST00000548620 PLCD3Q8N3E9 789 aa15.77■□□□□ 0.12
USP15-209ENST00000548620 PLEKHG5O94827 1062 aa15.69■□□□□ 0.1
USP15-209ENST00000548620 MNX1P50219 401 aaPredicted RBP15.68■□□□□ 0.1
USP15-209ENST00000548620 IFNLR1Q8IU57 520 aaPredicted RBP15.67■□□□□ 0.1
USP15-209ENST00000548620 FARP1Q9Y4F1 1045 aaPredicted RBP15.63■□□□□ 0.09
USP15-209ENST00000548620 POTEHQ6S545 545 aa15.6■□□□□ 0.09
USP15-209ENST00000548620 ZBTB47Q9UFB7 747 aaPredicted RBP15.6■□□□□ 0.09
USP15-209ENST00000548620 KLHL34Q8N239 644 aa15.57■□□□□ 0.08
USP15-209ENST00000548620 NPM1P06748 294 aaKnown RBP eCLIP15.52■□□□□ 0.08
USP15-209ENST00000548620 SPOCK2Q92563 424 aa15.46■□□□□ 0.07
USP15-209ENST00000548620 NUBP1P53384 320 aa15.44■□□□□ 0.06
USP15-209ENST00000548620 RASEFQ8IZ41 740 aa15.39■□□□□ 0.05
USP15-209ENST00000548620 C19orf67A6NJJ6 358 aa15.37■□□□□ 0.05
USP15-209ENST00000548620 HAX1O00165 279 aa15.33■□□□□ 0.04
USP15-209ENST00000548620 CD44P16070 742 aaKnown RBP15.33■□□□□ 0.04
USP15-209ENST00000548620 FAM212AQ96EL1 285 aa15.29■□□□□ 0.04
USP15-209ENST00000548620 TSPYL2Q9H2G4 693 aaPredicted RBP15.28■□□□□ 0.04
USP15-209ENST00000548620 EVX2Q03828 476 aa15.26■□□□□ 0.03
USP15-209ENST00000548620 PAK3O75914 559 aaPredicted RBP15.25■□□□□ 0.03
USP15-209ENST00000548620 DCAF8Q5TAQ9 597 aa15.24■□□□□ 0.03
USP15-209ENST00000548620 ZRANB1Q9UGI0 708 aa15.23■□□□□ 0.03
USP15-209ENST00000548620 GSE1Q14687 1217 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms