RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 BBC3Q96PG8 261 aaPredicted RBP17.29■□□□□ 0.36
CLSTN3-216ENST00000545663 CEP89Q96ST8 783 aa17.29■□□□□ 0.36
CLSTN3-216ENST00000545663 INO80BQ9C086 356 aaPredicted RBP17.29■□□□□ 0.36
CLSTN3-216ENST00000545663 IFT122Q9HBG6 1241 aa17.29■□□□□ 0.36
CLSTN3-216ENST00000545663 ZNF334Q9HCZ1 680 aaPredicted RBP17.29■□□□□ 0.36
CLSTN3-216ENST00000545663 TBC1D22BQ9NU19 505 aa17.29■□□□□ 0.36
CLSTN3-216ENST00000545663 TCEAL9Q9UHQ7 104 aa17.29■□□□□ 0.36
CLSTN3-216ENST00000545663 HES2Q9Y543 173 aa17.29■□□□□ 0.36
CLSTN3-216ENST00000545663 E7EWF7 191 aa17.28■□□□□ 0.36
CLSTN3-216ENST00000545663 ADAMTS3O15072 1205 aa17.28■□□□□ 0.36
CLSTN3-216ENST00000545663 ITGA4P13612 1032 aa17.28■□□□□ 0.36
CLSTN3-216ENST00000545663 HOXA9P31269 272 aa17.28■□□□□ 0.36
CLSTN3-216ENST00000545663 GNAQP50148 359 aa17.28■□□□□ 0.36
CLSTN3-216ENST00000545663 CDC42EP1Q00587 391 aa17.28■□□□□ 0.36
CLSTN3-216ENST00000545663 PTGDRQ13258 359 aa17.28■□□□□ 0.36
CLSTN3-216ENST00000545663 FAM78AQ5JUQ0 283 aa17.28■□□□□ 0.36
CLSTN3-216ENST00000545663 AXDND1Q5T1B0 1012 aaPredicted RBP17.28■□□□□ 0.36
CLSTN3-216ENST00000545663 RALYLQ86SE5 291 aaKnown RBP17.28■□□□□ 0.36
CLSTN3-216ENST00000545663 PDZD3Q86UT5 571 aa17.28■□□□□ 0.36
CLSTN3-216ENST00000545663 ZNF410Q86VK4 478 aa17.28■□□□□ 0.36
CLSTN3-216ENST00000545663 WDR5BQ86VZ2 330 aa17.28■□□□□ 0.36
CLSTN3-216ENST00000545663 MAP4K3Q8IVH8 894 aa17.28■□□□□ 0.36
CLSTN3-216ENST00000545663 LOXL4Q96JB6 756 aa17.28■□□□□ 0.36
CLSTN3-216ENST00000545663 TRMT61BQ9BVS5 477 aaKnown RBP17.28■□□□□ 0.36
CLSTN3-216ENST00000545663 MINDY3Q9H8M7 445 aa17.28■□□□□ 0.36
CLSTN3-216ENST00000545663 GDE1Q9NZC3 331 aa17.28■□□□□ 0.36
CLSTN3-216ENST00000545663 ADAM28Q9UKQ2 775 aa17.28■□□□□ 0.36
CLSTN3-216ENST00000545663 KALRNO60229 2985 aa17.28■□□□□ 0.36
CLSTN3-216ENST00000545663 IGKV6-21A0A0C4DH24 114 aa17.27■□□□□ 0.36
CLSTN3-216ENST00000545663 HYAL3O43820 417 aaPredicted RBP17.27■□□□□ 0.36
CLSTN3-216ENST00000545663 PAPSS2O95340 614 aaPredicted RBP17.27■□□□□ 0.36
CLSTN3-216ENST00000545663 GDI1P31150 447 aa17.27■□□□□ 0.36
CLSTN3-216ENST00000545663 MPLP40238 635 aa17.27■□□□□ 0.36
CLSTN3-216ENST00000545663 NAPAP54920 295 aa17.27■□□□□ 0.36
CLSTN3-216ENST00000545663 CACNA2D4Q7Z3S7 1137 aa17.27■□□□□ 0.36
CLSTN3-216ENST00000545663 GPR65Q8IYL9 337 aa17.27■□□□□ 0.36
CLSTN3-216ENST00000545663 LNX1Q8TBB1 728 aaPredicted RBP17.27■□□□□ 0.36
CLSTN3-216ENST00000545663 EDEM2Q9BV94 578 aa17.27■□□□□ 0.36
CLSTN3-216ENST00000545663 EIF2AQ9BY44 585 aaKnown RBP17.27■□□□□ 0.36
CLSTN3-216ENST00000545663 DISC1Q9NRI5 854 aa17.27■□□□□ 0.36
CLSTN3-216ENST00000545663 IPPQ9Y573 584 aa17.27■□□□□ 0.36
CLSTN3-216ENST00000545663 ADAMTS20P59510 1910 aa17.27■□□□□ 0.35
CLSTN3-216ENST00000545663 COL4A2P08572 1712 aa17.27■□□□□ 0.35
CLSTN3-216ENST00000545663 NR1I2O75469 434 aa17.26■□□□□ 0.35
CLSTN3-216ENST00000545663 TADA2AO75478 443 aa17.26■□□□□ 0.35
CLSTN3-216ENST00000545663 RHOP08100 348 aa17.26■□□□□ 0.35
CLSTN3-216ENST00000545663 DNM2P50570 870 aa17.26■□□□□ 0.35
CLSTN3-216ENST00000545663 ADCY7P51828 1080 aa17.26■□□□□ 0.35
CLSTN3-216ENST00000545663 CREMQ03060 361 aa17.26■□□□□ 0.35
CLSTN3-216ENST00000545663 JAKMIP3Q5VZ66 844 aa17.26■□□□□ 0.35
CLSTN3-216ENST00000545663 CEP57Q86XR8 500 aa17.26■□□□□ 0.35
CLSTN3-216ENST00000545663 NCOA7Q8NI08 942 aa17.26■□□□□ 0.35
CLSTN3-216ENST00000545663 HASPINQ8TF76 798 aa17.26■□□□□ 0.35
CLSTN3-216ENST00000545663 CRYGNQ8WXF5 182 aa17.26■□□□□ 0.35
CLSTN3-216ENST00000545663 PAAF1Q9BRP4 392 aa17.26■□□□□ 0.35
CLSTN3-216ENST00000545663 APOL6Q9BWW8 343 aa17.26■□□□□ 0.35
CLSTN3-216ENST00000545663 LNPKQ9C0E8 428 aa17.26■□□□□ 0.35
CLSTN3-216ENST00000545663 SEPT9Q9UHD8 586 aaPredicted RBP17.26■□□□□ 0.35
CLSTN3-216ENST00000545663 KLK13Q9UKR3 277 aa17.26■□□□□ 0.35
CLSTN3-216ENST00000545663 GPSM3Q9Y4H4 160 aa17.26■□□□□ 0.35
CLSTN3-216ENST00000545663 SMCO2A6NFE2 343 aa17.25■□□□□ 0.35
CLSTN3-216ENST00000545663 WDR64B1ANS9 1081 aa17.25■□□□□ 0.35
CLSTN3-216ENST00000545663 RPP40O75818 363 aaKnown RBP17.25■□□□□ 0.35
CLSTN3-216ENST00000545663 STBD1O95210 358 aa17.25■□□□□ 0.35
CLSTN3-216ENST00000545663 VIPR2P41587 438 aa17.25■□□□□ 0.35
CLSTN3-216ENST00000545663 SOX9P48436 509 aa17.25■□□□□ 0.35
CLSTN3-216ENST00000545663 CLK2P49760 499 aaKnown RBP17.25■□□□□ 0.35
CLSTN3-216ENST00000545663 PSMD5Q16401 504 aa17.25■□□□□ 0.35
CLSTN3-216ENST00000545663 VITQ6UXI7 678 aa17.25■□□□□ 0.35
CLSTN3-216ENST00000545663 MB21D2Q8IYB1 491 aaPredicted RBP17.25■□□□□ 0.35
CLSTN3-216ENST00000545663 GSTCDQ8NEC7 633 aa17.25■□□□□ 0.35
CLSTN3-216ENST00000545663 GAB3Q8WWW8 586 aa17.25■□□□□ 0.35
CLSTN3-216ENST00000545663 IRF7Q92985 503 aa17.25■□□□□ 0.35
CLSTN3-216ENST00000545663 TCEAL4Q96EI5 215 aa17.25■□□□□ 0.35
CLSTN3-216ENST00000545663 ZSWIM3Q96MP5 696 aa17.25■□□□□ 0.35
CLSTN3-216ENST00000545663 UBN1Q9NPG3 1134 aa17.25■□□□□ 0.35
CLSTN3-216ENST00000545663 VPS45Q9NRW7 570 aa17.25■□□□□ 0.35
CLSTN3-216ENST00000545663 TICRRQ7Z2Z1 1910 aa17.24■□□□□ 0.35
CLSTN3-216ENST00000545663 CHMP2AO43633 222 aa17.24■□□□□ 0.35
CLSTN3-216ENST00000545663 EXTL3O43909 919 aa17.24■□□□□ 0.35
CLSTN3-216ENST00000545663 SRGAP2CP0DJJ0 459 aa17.24■□□□□ 0.35
CLSTN3-216ENST00000545663 PTH1RQ03431 593 aa17.24■□□□□ 0.35
CLSTN3-216ENST00000545663 COL28A1Q2UY09 1125 aa17.24■□□□□ 0.35
CLSTN3-216ENST00000545663 PRR16Q569H4 304 aa17.24■□□□□ 0.35
CLSTN3-216ENST00000545663 NFXL1Q6ZNB6 911 aa17.24■□□□□ 0.35
CLSTN3-216ENST00000545663 TMTC3Q6ZXV5 915 aa17.24■□□□□ 0.35
CLSTN3-216ENST00000545663 GJA10Q969M2 543 aa17.24■□□□□ 0.35
CLSTN3-216ENST00000545663 TTPALQ9BTX7 342 aa17.24■□□□□ 0.35
CLSTN3-216ENST00000545663 NIFKQ9BYG3 293 aaKnown RBP17.24■□□□□ 0.35
CLSTN3-216ENST00000545663 ZFP14Q9HCL3 533 aa17.24■□□□□ 0.35
CLSTN3-216ENST00000545663 U3KPZ7 1027 aaPredicted RBP17.24■□□□□ 0.35
CLSTN3-216ENST00000545663 NCANO14594 1321 aa17.23■□□□□ 0.35
CLSTN3-216ENST00000545663 CYP3A4P08684 503 aa17.23■□□□□ 0.35
CLSTN3-216ENST00000545663 POU2F2P09086 479 aa17.23■□□□□ 0.35
CLSTN3-216ENST00000545663 HOXA6P31267 233 aa17.23■□□□□ 0.35
CLSTN3-216ENST00000545663 FAM171A1Q5VUB5 890 aa17.23■□□□□ 0.35
CLSTN3-216ENST00000545663 TXNDC11Q6PKC3 985 aa17.23■□□□□ 0.35
CLSTN3-216ENST00000545663 PIK3R5Q8WYR1 880 aa17.23■□□□□ 0.35
CLSTN3-216ENST00000545663 TRPV5Q9NQA5 729 aa17.23■□□□□ 0.35
CLSTN3-216ENST00000545663 NEUROG3Q9Y4Z2 214 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms