RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-223	ENST00000544669	FBXO28	Q9NVF7	368 aa		13.99	□□□□□ -0.17
CPSF7-223	ENST00000544669	TAS2R14	Q9NYV8	317 aa		13.99	□□□□□ -0.17
CPSF7-223	ENST00000544669	ASTN2	O75129	1339 aa	Predicted RBP	13.98	□□□□□ -0.17
CPSF7-223	ENST00000544669	IGSF9B	Q9UPX0	1349 aa		13.98	□□□□□ -0.17
CPSF7-223	ENST00000544669	SLC16A4	O15374	487 aa		13.98	□□□□□ -0.17
CPSF7-223	ENST00000544669	SGPL1	O95470	568 aa		13.98	□□□□□ -0.17
CPSF7-223	ENST00000544669	GAS8	O95995	478 aa		13.98	□□□□□ -0.17
CPSF7-223	ENST00000544669	LDHA	P00338	332 aa	Known RBP	13.98	□□□□□ -0.17
CPSF7-223	ENST00000544669	PSAP	P07602	524 aa		13.98	□□□□□ -0.17
CPSF7-223	ENST00000544669	MRPS9	P82933	396 aa	Known RBP	13.98	□□□□□ -0.17
CPSF7-223	ENST00000544669	C1orf220	Q5T0J3	134 aa		13.98	□□□□□ -0.17
CPSF7-223	ENST00000544669	TTC19	Q6DKK2	380 aa	Predicted RBP	13.98	□□□□□ -0.17
CPSF7-223	ENST00000544669	MAEA	Q7L5Y9	396 aa		13.98	□□□□□ -0.17
CPSF7-223	ENST00000544669	CPLX4	Q7Z7G2	160 aa		13.98	□□□□□ -0.17
CPSF7-223	ENST00000544669	NOP9	Q86U38	636 aa	Known RBP	13.98	□□□□□ -0.17
CPSF7-223	ENST00000544669	PRELID2	Q8N945	189 aa		13.98	□□□□□ -0.17
CPSF7-223	ENST00000544669	SLC20A1	Q8WUM9	679 aa		13.98	□□□□□ -0.17
CPSF7-223	ENST00000544669	ART4	Q93070	314 aa		13.98	□□□□□ -0.17
CPSF7-223	ENST00000544669	ZBED3	Q96IU2	234 aa	Predicted RBP	13.98	□□□□□ -0.17
CPSF7-223	ENST00000544669	PDCD2L	Q9BRP1	358 aa		13.98	□□□□□ -0.17
CPSF7-223	ENST00000544669	FOXP3	Q9BZS1	431 aa		13.98	□□□□□ -0.17
CPSF7-223	ENST00000544669	PPAN	Q9NQ55	473 aa	Known RBP	13.98	□□□□□ -0.17
CPSF7-223	ENST00000544669	PXMP2	Q9NR77	195 aa		13.98	□□□□□ -0.17
CPSF7-223	ENST00000544669	C1orf112	Q9NSG2	853 aa		13.98	□□□□□ -0.17
CPSF7-223	ENST00000544669	PCDHB2	Q9Y5E7	798 aa		13.98	□□□□□ -0.17
CPSF7-223	ENST00000544669	NFASC	O94856	1347 aa		13.98	□□□□□ -0.17
CPSF7-223	ENST00000544669	DENND3	A2RUS2	1198 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	NFIB	O00712	420 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	FSCN2	O14926	492 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	CYP26A1	O43174	497 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	RAD17	O75943	681 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	TAL1	P17542	331 aa	Predicted RBP	13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	CHRNB2	P17787	502 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	NPTX2	P47972	431 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	RPS6	P62753	249 aa	Known RBP	13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	LMNB2	Q03252	620 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	LIN9	Q5TKA1	542 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	SLFN12L	Q6IEE8	588 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	CCHCR1	Q8TD31	782 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	CHMP6	Q96FZ7	201 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	TRIM51	Q9BSJ1	452 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	TMEM39B	Q9GZU3	492 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	MRPL47	Q9HD33	250 aa	Known RBP	13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	SNX24	Q9Y343	169 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	PSME4	Q14997	1843 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	BACH1	O14867	736 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	RPS12	P25398	132 aa	Known RBP	13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	FMO1	Q01740	532 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	MAP2K1	Q02750	393 aa	Predicted RBP	13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	CENPC	Q03188	943 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	CYP24A1	Q07973	514 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	PPP1R7	Q15435	360 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	CLEC16A	Q2KHT3	1053 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	GNPTAB	Q3T906	1256 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	ERMARD	Q5T6L9	678 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	MFSD5	Q6N075	450 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	C6orf89	Q6UWU4	347 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	MIGA2	Q7L4E1	593 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	HELQ	Q8TDG4	1101 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	POMGNT1	Q8WZA1	660 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	TRIM31	Q9BZY9	425 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	IKZF4	Q9H2S9	585 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	CCDC134	Q9H6E4	229 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	COL20A1	Q9P218	1284 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	PGAP2	Q9UHJ9	254 aa		13.97	□□□□□ -0.17
CPSF7-223	ENST00000544669	ASAP2	O43150	1006 aa		13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	GHR	P10912	638 aa		13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	MYCL	P12524	364 aa	Predicted RBP	13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	MAPK4	P31152	587 aa		13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	FLT3	P36888	993 aa		13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	MMP13	P45452	471 aa		13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	LIG3	P49916	1009 aa		13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	ZNF211	Q13398	564 aa	Predicted RBP	13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	PTPRO	Q16827	1216 aa		13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	RNF187	Q5TA31	235 aa	Predicted RBP	13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	DCAF15	Q66K64	600 aa		13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	VSIG10L	Q86VR7	867 aa		13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	DNAAF5	Q86Y56	855 aa		13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	CPXCR1	Q8N123	301 aa		13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	CNPY4	Q8N129	248 aa		13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	FBXO25	Q8TCJ0	367 aa		13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	NSUN6	Q8TEA1	469 aa	Known RBP	13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	GLG1	Q92896	1179 aa		13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	CEP170P1	Q96L14	293 aa		13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	KREMEN1	Q96MU8	473 aa		13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	XPO6	Q96QU8	1125 aa	Known RBP	13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	TAAR1	Q96RJ0	339 aa		13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	PCDHB18P	Q96TA0	734 aa		13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	CCDC77	Q9BR77	488 aa		13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	PLCD4	Q9BRC7	762 aa		13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	GRHL1	Q9NZI5	618 aa		13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	TMOD4	Q9NZQ9	345 aa		13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	CNOT8	Q9UFF9	292 aa	Known RBP	13.96	□□□□□ -0.17
CPSF7-223	ENST00000544669	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.96	□□□□□ -0.18
CPSF7-223	ENST00000544669	RGPD4	Q7Z3J3	1758 aa		13.96	□□□□□ -0.18
CPSF7-223	ENST00000544669	BRWD3	Q6RI45	1802 aa		13.95	□□□□□ -0.18
CPSF7-223	ENST00000544669	PHF20L1	A8MW92	1017 aa		13.95	□□□□□ -0.18
CPSF7-223	ENST00000544669	THAP12	O43422	761 aa		13.95	□□□□□ -0.18
CPSF7-223	ENST00000544669	EXTL3	O43909	919 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms