RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	ANKS6	Q68DC2	871 aa		6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	CATIP	Q7Z7H3	387 aa		6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	SGMS1	Q86VZ5	419 aa		6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	XYLT1	Q86Y38	959 aa		6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	ZGPAT	Q8N5A5	531 aa	Known RBP	6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	MB21D1	Q8N884	522 aa		6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	STON2	Q8WXE9	905 aa		6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	EDA	Q92838	391 aa		6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	KRTAP3-1	Q9BYR8	98 aa		6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	KLC2	Q9H0B6	622 aa		6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	KCNH6	Q9H252	994 aa		6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	METTL14	Q9HCE5	456 aa	Known RBP	6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	TMEM140	Q9NV12	185 aa		6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	HECA	Q9UBI9	543 aa	Predicted RBP	6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	PNMA8B	Q9ULN7	279 aa	Predicted RBP	6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	ATRNL1	Q5VV63	1379 aa		6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	KRTAP9-7	A8MTY7	169 aa		6.88	□□□□□ -1.31
LEMD3-205	ENST00000544506	MFAP3L	O75121	409 aa		6.88	□□□□□ -1.31
LEMD3-205	ENST00000544506	GPR32	O75388	356 aa		6.88	□□□□□ -1.31
LEMD3-205	ENST00000544506	RFPL1	O75677	317 aa		6.88	□□□□□ -1.31
LEMD3-205	ENST00000544506	IPO13	O94829	963 aa	Known RBP	6.88	□□□□□ -1.31
LEMD3-205	ENST00000544506	FPR1	P21462	350 aa		6.88	□□□□□ -1.31
LEMD3-205	ENST00000544506	PCSK1	P29120	753 aa		6.88	□□□□□ -1.31
LEMD3-205	ENST00000544506	TARDBP	Q13148	414 aa	Known RBP eCLIP	6.88	□□□□□ -1.31
LEMD3-205	ENST00000544506	FAM47A	Q5JRC9	791 aa		6.88	□□□□□ -1.31
LEMD3-205	ENST00000544506	DOK3	Q7L591	496 aa		6.88	□□□□□ -1.31
LEMD3-205	ENST00000544506	TPH2	Q8IWU9	490 aa		6.88	□□□□□ -1.31
LEMD3-205	ENST00000544506	ANKRD35	Q8N283	1001 aa		6.88	□□□□□ -1.31
LEMD3-205	ENST00000544506	MDGA1	Q8NFP4	955 aa		6.88	□□□□□ -1.31
LEMD3-205	ENST00000544506	CASKIN2	Q8WXE0	1202 aa		6.88	□□□□□ -1.31
LEMD3-205	ENST00000544506	ST8SIA2	Q92186	375 aa		6.88	□□□□□ -1.31
LEMD3-205	ENST00000544506	MIEF2	Q96C03	454 aa		6.88	□□□□□ -1.31
LEMD3-205	ENST00000544506	CYFIP2	Q96F07	1278 aa		6.88	□□□□□ -1.31
LEMD3-205	ENST00000544506	CPPED1	Q9BRF8	314 aa	Predicted RBP	6.88	□□□□□ -1.31
LEMD3-205	ENST00000544506	CPEB1	Q9BZB8	566 aa	Known RBP	6.88	□□□□□ -1.31
LEMD3-205	ENST00000544506	GTPBP4	Q9BZE4	634 aa	Known RBP	6.88	□□□□□ -1.31
LEMD3-205	ENST00000544506	TDP1	Q9NUW8	608 aa		6.88	□□□□□ -1.31
LEMD3-205	ENST00000544506	TCEAL9	Q9UHQ7	104 aa		6.88	□□□□□ -1.31
LEMD3-205	ENST00000544506	MYBBP1A	Q9BQG0	1328 aa	Known RBP	6.87	□□□□□ -1.31
LEMD3-205	ENST00000544506	CXorf49	A8MYA2	514 aa	Predicted RBP	6.87	□□□□□ -1.31
LEMD3-205	ENST00000544506		B5MCH6	92 aa		6.87	□□□□□ -1.31
LEMD3-205	ENST00000544506	SGTA	O43765	313 aa		6.87	□□□□□ -1.31
LEMD3-205	ENST00000544506	POU2F2	P09086	479 aa		6.87	□□□□□ -1.31
LEMD3-205	ENST00000544506	IL2RB	P14784	551 aa		6.87	□□□□□ -1.31
LEMD3-205	ENST00000544506	PDC	P20941	246 aa		6.87	□□□□□ -1.31
LEMD3-205	ENST00000544506	AKAP5	P24588	427 aa		6.87	□□□□□ -1.31
LEMD3-205	ENST00000544506	FXR1	P51114	621 aa	Known RBP eCLIP	6.87	□□□□□ -1.31
LEMD3-205	ENST00000544506	ADAM17	P78536	824 aa		6.87	□□□□□ -1.31
LEMD3-205	ENST00000544506	CDC42EP1	Q00587	391 aa		6.87	□□□□□ -1.31
LEMD3-205	ENST00000544506	MTM1	Q13496	603 aa		6.87	□□□□□ -1.31
LEMD3-205	ENST00000544506	R3HDM1	Q15032	1099 aa	Known RBP	6.87	□□□□□ -1.31
LEMD3-205	ENST00000544506	AFMID	Q63HM1	303 aa		6.87	□□□□□ -1.31
LEMD3-205	ENST00000544506	FAM83A	Q86UY5	434 aa		6.87	□□□□□ -1.31
LEMD3-205	ENST00000544506	PALM2	Q8IXS6	379 aa		6.87	□□□□□ -1.31
LEMD3-205	ENST00000544506	SLC35B2	Q8TB61	432 aa		6.87	□□□□□ -1.31
LEMD3-205	ENST00000544506	MOCS1	Q9NZB8	636 aa		6.87	□□□□□ -1.31
LEMD3-205	ENST00000544506	HDAC5	Q9UQL6	1122 aa		6.87	□□□□□ -1.31
LEMD3-205	ENST00000544506	ACTL7A	Q9Y615	435 aa		6.87	□□□□□ -1.31
LEMD3-205	ENST00000544506	MUSK	O15146	869 aa		6.86	□□□□□ -1.31
LEMD3-205	ENST00000544506	DTNB	O60941	627 aa		6.86	□□□□□ -1.31
LEMD3-205	ENST00000544506	RAP2A	P10114	183 aa		6.86	□□□□□ -1.31
LEMD3-205	ENST00000544506	HSP90B1	P14625	803 aa	Known RBP	6.86	□□□□□ -1.31
LEMD3-205	ENST00000544506	HK1	P19367	917 aa		6.86	□□□□□ -1.31
LEMD3-205	ENST00000544506	DDC	P20711	480 aa		6.86	□□□□□ -1.31
LEMD3-205	ENST00000544506	HIBADH	P31937	336 aa	Known RBP	6.86	□□□□□ -1.31
LEMD3-205	ENST00000544506	ALDH1A3	P47895	512 aa		6.86	□□□□□ -1.31
LEMD3-205	ENST00000544506	RABGGTB	P53611	331 aa		6.86	□□□□□ -1.31
LEMD3-205	ENST00000544506	ATP8B2	P98198	1209 aa		6.86	□□□□□ -1.31
LEMD3-205	ENST00000544506	SPATS1	Q496A3	300 aa		6.86	□□□□□ -1.31
LEMD3-205	ENST00000544506	C1QL3	Q5VWW1	255 aa		6.86	□□□□□ -1.31
LEMD3-205	ENST00000544506	PPP4R3A	Q6IN85	833 aa		6.86	□□□□□ -1.31
LEMD3-205	ENST00000544506		Q6ZRM9	215 aa		6.86	□□□□□ -1.31
LEMD3-205	ENST00000544506	USP45	Q70EL2	814 aa		6.86	□□□□□ -1.31
LEMD3-205	ENST00000544506	CHPF	Q8IZ52	775 aa		6.86	□□□□□ -1.31
LEMD3-205	ENST00000544506	ATXN2L	Q8WWM7	1075 aa	Known RBP	6.86	□□□□□ -1.31
LEMD3-205	ENST00000544506	DVL3	Q92997	716 aa	Predicted RBP	6.86	□□□□□ -1.31
LEMD3-205	ENST00000544506	TMX3	Q96JJ7	454 aa		6.86	□□□□□ -1.31
LEMD3-205	ENST00000544506	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	6.86	□□□□□ -1.31
LEMD3-205	ENST00000544506	NOB1	Q9ULX3	412 aa	Known RBP	6.86	□□□□□ -1.31
LEMD3-205	ENST00000544506	PCDHB1	Q9Y5F3	818 aa		6.86	□□□□□ -1.31
LEMD3-205	ENST00000544506	CFAP20	Q9Y6A4	193 aa	Known RBP	6.86	□□□□□ -1.31
LEMD3-205	ENST00000544506	CYP27B1	O15528	508 aa		6.85	□□□□□ -1.31
LEMD3-205	ENST00000544506	ZNF20	P17024	532 aa		6.85	□□□□□ -1.31
LEMD3-205	ENST00000544506	CYP2C19	P33261	490 aa		6.85	□□□□□ -1.31
LEMD3-205	ENST00000544506	PTH1R	Q03431	593 aa		6.85	□□□□□ -1.31
LEMD3-205	ENST00000544506	PRKD1	Q15139	912 aa	Predicted RBP	6.85	□□□□□ -1.31
LEMD3-205	ENST00000544506	CSRP2	Q16527	193 aa		6.85	□□□□□ -1.31
LEMD3-205	ENST00000544506	DCAF17	Q5H9S7	520 aa	Predicted RBP	6.85	□□□□□ -1.31
LEMD3-205	ENST00000544506	GPRIN1	Q7Z2K8	1008 aa		6.85	□□□□□ -1.31
LEMD3-205	ENST00000544506	RSPH3	Q86UC2	560 aa		6.85	□□□□□ -1.31
LEMD3-205	ENST00000544506	PRR18	Q8N4B5	295 aa		6.85	□□□□□ -1.31
LEMD3-205	ENST00000544506	OR52N2	Q8NGI0	321 aa		6.85	□□□□□ -1.31
LEMD3-205	ENST00000544506	NSUN6	Q8TEA1	469 aa	Known RBP	6.85	□□□□□ -1.31
LEMD3-205	ENST00000544506	RUVBL1	Q9Y265	456 aa	Known RBP	6.85	□□□□□ -1.31
LEMD3-205	ENST00000544506	TBKBP1	A7MCY6	615 aa		6.84	□□□□□ -1.31
LEMD3-205	ENST00000544506	PRR5-ARHGAP8	B1AHC4	643 aa		6.84	□□□□□ -1.31
LEMD3-205	ENST00000544506	PJA2	O43164	708 aa		6.84	□□□□□ -1.31
LEMD3-205	ENST00000544506	PRPF3	O43395	683 aa	Known RBP	6.84	□□□□□ -1.31
LEMD3-205	ENST00000544506	TSPAN6	O43657	245 aa		6.84	□□□□□ -1.31

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