RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 OR6P1Q8NGX9 317 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 SLC35G2Q8TBE7 412 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 DEFB129Q9H1M3 183 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 CD163L1Q9NR16 1453 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 GRID2IPA4D2P6 1211 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 CYP2B6P20813 491 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 GUCY2CP25092 1073 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 PPARGP37231 505 aaPredicted RBP13.57□□□□□ -0.24
CHD4-211ENST00000544484 CAV1Q03135 178 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 SLC18A3Q16572 532 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 KLHL38Q2WGJ6 581 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 BTBD8Q5XKL5 378 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 RBM46Q8TBY0 533 aaKnown RBP13.57□□□□□ -0.24
CHD4-211ENST00000544484 ATG4CQ96DT6 458 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 EFHD1Q9BUP0 239 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 MYOZ2Q9NPC6 264 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 H0Y3Z8 333 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 NCOA4Q13772 614 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 ACCSLQ4AC99 568 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 SP110Q9HB58 689 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 PRDM5Q9NQX1 630 aaPredicted RBP13.57□□□□□ -0.24
CHD4-211ENST00000544484 PDS5AQ29RF7 1337 aaKnown RBP13.57□□□□□ -0.24
CHD4-211ENST00000544484 CAMSAP1Q5T5Y3 1602 aa13.57□□□□□ -0.24
CHD4-211ENST00000544484 DFFAO00273 331 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 NEMP1O14524 444 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 ATP9BO43861 1147 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 VSNL1P62760 191 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 ANKRD20A4Q4UJ75 823 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 ANKRD20A8PQ5CZ79 823 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 ANKRD20A2Q5SQ80 823 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 ANKRD20A1Q5TYW2 823 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 TRMT10CQ7L0Y3 403 aaKnown RBP13.56□□□□□ -0.24
CHD4-211ENST00000544484 ANKMY2Q8IV38 441 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 SNF8Q96H20 258 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 ZNF560Q96MR9 790 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 SMARCAL1Q9NZC9 954 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 C19orf81C9J6K1 198 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 NOP14P78316 857 aaKnown RBP13.56□□□□□ -0.24
CHD4-211ENST00000544484 EMC2Q15006 297 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 NDUFAF2Q8N183 169 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 C18orf8Q96DM3 657 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 STK33Q9BYT3 514 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 PFASO15067 1338 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 SLC16A3O15427 465 aaKnown RBP13.56□□□□□ -0.24
CHD4-211ENST00000544484 COPS2P61201 443 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 CCZ1BP86790 482 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 CCZ1P86791 482 aaPredicted RBP13.56□□□□□ -0.24
CHD4-211ENST00000544484 SEMA3FQ13275 785 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 KCNV1Q6PIU1 500 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 CERKQ8TCT0 537 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 DDX56Q9NY93 547 aaKnown RBP13.56□□□□□ -0.24
CHD4-211ENST00000544484 PPRC1Q5VV67 1664 aaKnown RBP13.56□□□□□ -0.24
CHD4-211ENST00000544484 PPFIA2O75334 1257 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 PIP4K2CQ8TBX8 421 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 DACT3Q96B18 629 aaPredicted RBP13.56□□□□□ -0.24
CHD4-211ENST00000544484 BFARQ9NZS9 450 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 SPATA31A5Q5VU36 1347 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 SPATA31A7Q8IWB4 1347 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 GRAP2O75791 330 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 AP3M2P53677 418 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 NR1I3Q14994 352 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 MMS22LQ6ZRQ5 1243 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 MXRA8Q9BRK3 442 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 TUBB6Q9BUF5 446 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 SMYD3Q9H7B4 428 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 KRT82Q9NSB4 513 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 FAM8A1Q9UBU6 413 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 MAD2L2Q9UI95 211 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 SNX12Q9UMY4 172 aa13.56□□□□□ -0.24
CHD4-211ENST00000544484 POLR1AO95602 1720 aaPredicted RBP13.56□□□□□ -0.24
CHD4-211ENST00000544484 TBX3O15119 743 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 PPP2R2AP63151 447 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 GRAMD1BQ3KR37 738 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 INTS5Q6P9B9 1019 aaKnown RBP13.55□□□□□ -0.24
CHD4-211ENST00000544484 CDR2LQ86X02 465 aaPredicted RBP13.55□□□□□ -0.24
CHD4-211ENST00000544484 FBXO41Q8TF61 875 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 TUBE1Q9UJT0 475 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 APOBEC2Q9Y235 224 aaKnown RBP13.55□□□□□ -0.24
CHD4-211ENST00000544484 SNX2O60749 519 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 SMARCA1P28370 1054 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 EIF3EP60228 445 aaKnown RBP13.55□□□□□ -0.24
CHD4-211ENST00000544484 TERF2Q15554 542 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 EPC2Q52LR7 807 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 AGAP3Q96P47 875 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 SMARCAD1Q9H4L7 1026 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 ACTR5Q9H9F9 607 aaPredicted RBP13.55□□□□□ -0.24
CHD4-211ENST00000544484 ALG13Q9NP73 1137 aaKnown RBP13.55□□□□□ -0.24
CHD4-211ENST00000544484 KCNH7Q9NS40 1196 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 CHORDC1Q9UHD1 332 aaPredicted RBP13.55□□□□□ -0.24
CHD4-211ENST00000544484 PHEXP78562 749 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 TAF11Q15544 211 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 TNIP3Q96KP6 325 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 SPATA17Q96L03 361 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 FAM118BQ9BPY3 351 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 PI4K2AQ9BTU6 479 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 KIFC3Q9BVG8 833 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 FAM187AA6NFU0 413 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 TECPR2O15040 1411 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 KDM6AO15550 1401 aaPredicted RBP13.55□□□□□ -0.24
CHD4-211ENST00000544484 LUC7L3O95232 432 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms