RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 CFAP61Q8NHU2 1237 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 DDX3XO00571 662 aaKnown RBP eCLIP13.67□□□□□ -0.22
PDZD4-209ENST00000544474 TBCAO75347 108 aaKnown RBP13.67□□□□□ -0.22
PDZD4-209ENST00000544474 E2F6O75461 281 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 UFL1O94874 794 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 CACNA2D1P54289 1103 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 BPIFB4P59827 614 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 PSMC6P62333 389 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 IRX4P78413 519 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 MCL1Q07820 350 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 CNGA2Q16280 664 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 ARHGAP18Q8N392 663 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 MYCT1Q8N699 235 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 STK32AQ8WU08 396 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 CCDC127Q96BQ5 260 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 SPZ1Q9BXG8 430 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 DNAJC12Q9UKB3 198 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 PARP4Q9UKK3 1724 aaKnown RBP13.67□□□□□ -0.22
PDZD4-209ENST00000544474 AFPP02771 609 aaKnown RBP13.67□□□□□ -0.22
PDZD4-209ENST00000544474 HNRNPCP07910 306 aaKnown RBP eCLIP13.67□□□□□ -0.22
PDZD4-209ENST00000544474 INHBCP55103 352 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 BNIP1Q12981 228 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 CBX3Q13185 183 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 CCDC92Q53HC0 331 aaPredicted RBP13.67□□□□□ -0.22
PDZD4-209ENST00000544474 COBLL1Q53SF7 1204 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 TTBK2Q6IQ55 1244 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 PHC3Q8NDX5 983 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 SMC6Q96SB8 1091 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 KIAA1683Q9H0B3 1180 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 ARL2BPQ9Y2Y0 163 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 ALG6Q9Y672 507 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 LDHCP07864 332 aa13.66□□□□□ -0.22
PDZD4-209ENST00000544474 PTDSS1P48651 473 aaKnown RBP13.66□□□□□ -0.22
PDZD4-209ENST00000544474 OLFML2BQ68BL8 750 aa13.66□□□□□ -0.22
PDZD4-209ENST00000544474 SCFD2Q8WU76 684 aa13.66□□□□□ -0.22
PDZD4-209ENST00000544474 SLC20A1Q8WUM9 679 aa13.66□□□□□ -0.22
PDZD4-209ENST00000544474 HIC2Q96JB3 615 aa13.66□□□□□ -0.22
PDZD4-209ENST00000544474 CEP63Q96MT8 703 aa13.66□□□□□ -0.22
PDZD4-209ENST00000544474 CDC42EP4Q9H3Q1 356 aaKnown RBP13.66□□□□□ -0.22
PDZD4-209ENST00000544474 SPATA7Q9P0W8 599 aa13.66□□□□□ -0.22
PDZD4-209ENST00000544474 GMEB1Q9Y692 573 aa13.66□□□□□ -0.22
PDZD4-209ENST00000544474 UBR2Q8IWV8 1755 aa13.66□□□□□ -0.22
PDZD4-209ENST00000544474 CCDC188H7C350 402 aa13.66□□□□□ -0.22
PDZD4-209ENST00000544474 RBAK-RBAKDNI3L0D1 243 aa13.66□□□□□ -0.22
PDZD4-209ENST00000544474 ZBTB39O15060 712 aa13.66□□□□□ -0.22
PDZD4-209ENST00000544474 RPL13P26373 211 aaKnown RBP13.66□□□□□ -0.22
PDZD4-209ENST00000544474 CHKAP35790 457 aa13.66□□□□□ -0.22
PDZD4-209ENST00000544474 BTKQ06187 659 aa13.66□□□□□ -0.22
PDZD4-209ENST00000544474 AUHQ13825 339 aaKnown RBP13.66□□□□□ -0.22
PDZD4-209ENST00000544474 SMC1BQ8NDV3 1235 aa13.66□□□□□ -0.22
PDZD4-209ENST00000544474 FAM192AQ9GZU8 254 aa13.66□□□□□ -0.22
PDZD4-209ENST00000544474 ANKRD2Q9GZV1 360 aa13.66□□□□□ -0.22
PDZD4-209ENST00000544474 BHMT2Q9H2M3 363 aa13.66□□□□□ -0.22
PDZD4-209ENST00000544474 MARCOQ9UEW3 520 aaPredicted RBP13.66□□□□□ -0.22
PDZD4-209ENST00000544474 CHMP2BQ9UQN3 213 aa13.66□□□□□ -0.22
PDZD4-209ENST00000544474 ZBED4O75132 1171 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 AKAP3O75969 853 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 FTLP02792 175 aaPredicted RBP13.65□□□□□ -0.22
PDZD4-209ENST00000544474 SKIP12755 728 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 ATXN3P54252 364 aaPredicted RBP13.65□□□□□ -0.22
PDZD4-209ENST00000544474 COG2Q14746 738 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 SHROOM1Q2M3G4 852 aaPredicted RBP13.65□□□□□ -0.22
PDZD4-209ENST00000544474 RFWD3Q6PCD5 774 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 TPH2Q8IWU9 490 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 CYP4X1Q8N118 509 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 PPM1KQ8N3J5 372 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 UNC45AQ9H3U1 944 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 ARMCX1Q9P291 453 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 BCL9O00512 1426 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 GOLGA8IPA6NC78 632 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 GOLGA8JA6NMD2 632 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 SMAPO00193 183 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 CAPN9O14815 690 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 HNRNPRO43390 633 aaKnown RBP13.65□□□□□ -0.22
PDZD4-209ENST00000544474 NMT1P30419 496 aaKnown RBP13.65□□□□□ -0.22
PDZD4-209ENST00000544474 RASSF2P50749 326 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 GSTO1P78417 241 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 SGO2Q562F6 1265 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 FOXB2Q5VYV0 432 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 CC2D2BQ6DHV5 1058 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 LLGL2Q6P1M3 1020 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 NT5DC3Q86UY8 548 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 ATXN2LQ8WWM7 1075 aaKnown RBP13.65□□□□□ -0.22
PDZD4-209ENST00000544474 LZICQ8WZA0 190 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 CCDC124Q96CT7 223 aaKnown RBP13.65□□□□□ -0.22
PDZD4-209ENST00000544474 ERLEC1Q96DZ1 483 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 UBE2TQ9NPD8 197 aaPredicted RBP13.65□□□□□ -0.22
PDZD4-209ENST00000544474 COL1A1P02452 1464 aaPredicted RBP13.65□□□□□ -0.22
PDZD4-209ENST00000544474 KRT36O76013 467 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 FXR2P51116 673 aaKnown RBP eCLIP13.65□□□□□ -0.22
PDZD4-209ENST00000544474 EIF3BP55884 814 aaKnown RBP13.65□□□□□ -0.22
PDZD4-209ENST00000544474 GTF2IP78347 998 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 MPP2Q14168 576 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 CMPK2Q5EBM0 449 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 C10orf76Q5T2E6 689 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 ARHGAP27Q6ZUM4 889 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 SYCE1Q8N0S2 351 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 RBBP8NLQ8NC74 664 aaPredicted RBP13.65□□□□□ -0.22
PDZD4-209ENST00000544474 PPFIBP2Q8ND30 876 aa13.65□□□□□ -0.22
PDZD4-209ENST00000544474 WDR37Q9Y2I8 494 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms