RNA–Protein interactions for RNA: ENST00000544151.1

LDHB-210, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-210ENST00000544151 TPRNQ4KMQ1 711 aa17.2■□□□□ 0.34
LDHB-210ENST00000544151 TAS1R3Q7RTX0 852 aa17.2■□□□□ 0.34
LDHB-210ENST00000544151 APBB1IPQ7Z5R6 666 aaPredicted RBP17.2■□□□□ 0.34
LDHB-210ENST00000544151 RABGGTAQ92696 567 aa17.2■□□□□ 0.34
LDHB-210ENST00000544151 COLEC11Q9BWP8 271 aa17.2■□□□□ 0.34
LDHB-210ENST00000544151 PHF7Q9BWX1 381 aaPredicted RBP17.2■□□□□ 0.34
LDHB-210ENST00000544151 EMILIN2Q9BXX0 1053 aa17.2■□□□□ 0.34
LDHB-210ENST00000544151 MRPL4Q9BYD3 311 aaKnown RBP17.2■□□□□ 0.34
LDHB-210ENST00000544151 S1PR5Q9H228 398 aa17.2■□□□□ 0.34
LDHB-210ENST00000544151 DZANK1Q9NVP4 752 aa17.2■□□□□ 0.34
LDHB-210ENST00000544151 KCND2Q9NZV8 630 aa17.2■□□□□ 0.34
LDHB-210ENST00000544151 SLC26A4O43511 780 aa17.19■□□□□ 0.34
LDHB-210ENST00000544151 DCXO43602 365 aa17.19■□□□□ 0.34
LDHB-210ENST00000544151 CNPP09543 421 aaKnown RBP17.19■□□□□ 0.34
LDHB-210ENST00000544151 TUSC3Q13454 348 aa17.19■□□□□ 0.34
LDHB-210ENST00000544151 HSP90AA2PQ14568 343 aaPredicted RBP17.19■□□□□ 0.34
LDHB-210ENST00000544151 KARSQ15046 597 aaKnown RBP17.19■□□□□ 0.34
LDHB-210ENST00000544151 GLRA4Q5JXX5 417 aa17.19■□□□□ 0.34
LDHB-210ENST00000544151 FUT10Q6P4F1 479 aa17.19■□□□□ 0.34
LDHB-210ENST00000544151 FAM173BQ6P4H8 233 aa17.19■□□□□ 0.34
LDHB-210ENST00000544151 PPFIBP1Q86W92 1011 aa17.19■□□□□ 0.34
LDHB-210ENST00000544151 RNF168Q8IYW5 571 aaPredicted RBP17.19■□□□□ 0.34
LDHB-210ENST00000544151 CEP120Q8N960 986 aa17.19■□□□□ 0.34
LDHB-210ENST00000544151 RPGRIP1Q96KN7 1286 aa17.19■□□□□ 0.34
LDHB-210ENST00000544151 KLHL5Q96PQ7 755 aa17.19■□□□□ 0.34
LDHB-210ENST00000544151 PAAF1Q9BRP4 392 aa17.19■□□□□ 0.34
LDHB-210ENST00000544151 CDT1Q9H211 546 aa17.19■□□□□ 0.34
LDHB-210ENST00000544151 TMEM134Q9H6X4 195 aa17.19■□□□□ 0.34
LDHB-210ENST00000544151 ADAM28Q9UKQ2 775 aa17.19■□□□□ 0.34
LDHB-210ENST00000544151 TNFSF13BQ9Y275 285 aa17.19■□□□□ 0.34
LDHB-210ENST00000544151 RBM19Q9Y4C8 960 aaKnown RBP17.19■□□□□ 0.34
LDHB-210ENST00000544151 CLIC4Q9Y696 253 aa17.19■□□□□ 0.34
LDHB-210ENST00000544151 NPHP3-ACAD11A0A0J9YXS1 232 aa17.18■□□□□ 0.34
LDHB-210ENST00000544151 THP07101 528 aa17.18■□□□□ 0.34
LDHB-210ENST00000544151 HARSP12081 509 aaKnown RBP17.18■□□□□ 0.34
LDHB-210ENST00000544151 ALADP13716 330 aa17.18■□□□□ 0.34
LDHB-210ENST00000544151 PLS3P13797 630 aa17.18■□□□□ 0.34
LDHB-210ENST00000544151 PLCG1P19174 1290 aa17.18■□□□□ 0.34
LDHB-210ENST00000544151 SP100P23497 879 aaPredicted RBP17.18■□□□□ 0.34
LDHB-210ENST00000544151 KLRC2P26717 231 aa17.18■□□□□ 0.34
LDHB-210ENST00000544151 DHX8Q14562 1220 aaKnown RBP17.18■□□□□ 0.34
LDHB-210ENST00000544151 TMEM31Q5JXX7 168 aa17.18■□□□□ 0.34
LDHB-210ENST00000544151 RARS2Q5T160 578 aaKnown RBP17.18■□□□□ 0.34
LDHB-210ENST00000544151 KIAA1841Q6NSI8 718 aa17.18■□□□□ 0.34
LDHB-210ENST00000544151 CES5AQ6NT32 575 aa17.18■□□□□ 0.34
LDHB-210ENST00000544151 TAS1R1Q7RTX1 841 aa17.18■□□□□ 0.34
LDHB-210ENST00000544151 GPBP1Q86WP2 473 aa17.18■□□□□ 0.34
LDHB-210ENST00000544151 LRRC15Q8TF66 581 aa17.18■□□□□ 0.34
LDHB-210ENST00000544151 HASPINQ8TF76 798 aa17.18■□□□□ 0.34
LDHB-210ENST00000544151 B3GALT6Q96L58 329 aa17.18■□□□□ 0.34
LDHB-210ENST00000544151 ACO2Q99798 780 aaKnown RBP17.18■□□□□ 0.34
LDHB-210ENST00000544151 TARS2Q9BW92 718 aaKnown RBP17.18■□□□□ 0.34
LDHB-210ENST00000544151 CXCL16Q9H2A7 254 aa17.18■□□□□ 0.34
LDHB-210ENST00000544151 MUTYHQ9UIF7 546 aa17.18■□□□□ 0.34
LDHB-210ENST00000544151 SSX2IPQ9Y2D8 614 aa17.18■□□□□ 0.34
LDHB-210ENST00000544151 GTF3C3Q9Y5Q9 886 aa17.18■□□□□ 0.34
LDHB-210ENST00000544151 KIF4AO95239 1232 aa17.17■□□□□ 0.34
LDHB-210ENST00000544151 MARCKSP29966 332 aaPredicted RBP17.17■□□□□ 0.34
LDHB-210ENST00000544151 CLCN4P51793 760 aa17.17■□□□□ 0.34
LDHB-210ENST00000544151 SMTNP53814 917 aa17.17■□□□□ 0.34
LDHB-210ENST00000544151 OSTNP61366 133 aa17.17■□□□□ 0.34
LDHB-210ENST00000544151 CEBPZQ03701 1054 aaKnown RBP17.17■□□□□ 0.34
LDHB-210ENST00000544151 ITIH3Q06033 890 aa17.17■□□□□ 0.34
LDHB-210ENST00000544151 STRN3Q13033 797 aa17.17■□□□□ 0.34
LDHB-210ENST00000544151 PTPAQ15257 358 aa17.17■□□□□ 0.34
LDHB-210ENST00000544151 ZBTB33Q86T24 672 aa17.17■□□□□ 0.34
LDHB-210ENST00000544151 RNF135Q8IUD6 432 aa17.17■□□□□ 0.34
LDHB-210ENST00000544151 C12orf76Q8N812 135 aaPredicted RBP17.17■□□□□ 0.34
LDHB-210ENST00000544151 SLC22A17Q8WUG5 538 aa17.17■□□□□ 0.34
LDHB-210ENST00000544151 SPIRE2Q8WWL2 714 aa17.17■□□□□ 0.34
LDHB-210ENST00000544151 REEP2Q9BRK0 252 aa17.17■□□□□ 0.34
LDHB-210ENST00000544151 CCDC94Q9BW85 323 aaPredicted RBP17.17■□□□□ 0.34
LDHB-210ENST00000544151 GPR62Q9BZJ7 368 aa17.17■□□□□ 0.34
LDHB-210ENST00000544151 C11orf16Q9NQ32 467 aa17.17■□□□□ 0.34
LDHB-210ENST00000544151 BLOC1S4Q9NUP1 217 aa17.17■□□□□ 0.34
LDHB-210ENST00000544151 ANKFY1Q9P2R3 1169 aa17.17■□□□□ 0.34
LDHB-210ENST00000544151 ODF2LQ9ULJ1 636 aa17.17■□□□□ 0.34
LDHB-210ENST00000544151 MTMR6Q9Y217 621 aa17.17■□□□□ 0.34
LDHB-210ENST00000544151 SF3B1O75533 1304 aaKnown RBP eCLIP17.17■□□□□ 0.344e-7■■■■■ 133.7
LDHB-210ENST00000544151 LOC730098B7Z3J9 87 aa17.16■□□□□ 0.34
LDHB-210ENST00000544151 STX6O43752 255 aa17.16■□□□□ 0.34
LDHB-210ENST00000544151 LILRB3O75022 631 aa17.16■□□□□ 0.34
LDHB-210ENST00000544151 TADA2AO75478 443 aa17.16■□□□□ 0.34
LDHB-210ENST00000544151 EFEMP2O95967 443 aa17.16■□□□□ 0.34
LDHB-210ENST00000544151 KRT18P05783 430 aaKnown RBP17.16■□□□□ 0.34
LDHB-210ENST00000544151 ADH1AP07327 375 aa17.16■□□□□ 0.34
LDHB-210ENST00000544151 WEE2P0C1S8 567 aa17.16■□□□□ 0.34
LDHB-210ENST00000544151 COL9A1P20849 921 aa17.16■□□□□ 0.34
LDHB-210ENST00000544151 YARSP54577 528 aaKnown RBP17.16■□□□□ 0.34
LDHB-210ENST00000544151 DSG1Q02413 1049 aa17.16■□□□□ 0.34
LDHB-210ENST00000544151 MCM6Q14566 821 aa17.16■□□□□ 0.34
LDHB-210ENST00000544151 NAB2Q15742 525 aa17.16■□□□□ 0.34
LDHB-210ENST00000544151 USP41Q3LFD5 358 aa17.16■□□□□ 0.34
LDHB-210ENST00000544151 SPECC1Q5M775 1068 aa17.16■□□□□ 0.34
LDHB-210ENST00000544151 MPZL3Q6UWV2 235 aa17.16■□□□□ 0.34
LDHB-210ENST00000544151 HSCBQ8IWL3 235 aa17.16■□□□□ 0.34
LDHB-210ENST00000544151 TMEM161BQ8NDZ6 487 aa17.16■□□□□ 0.34
LDHB-210ENST00000544151 LARP4BQ92615 738 aaKnown RBP17.16■□□□□ 0.34
LDHB-210ENST00000544151 RAD54LQ92698 747 aa17.16■□□□□ 0.34
LDHB-210ENST00000544151 FBXL18Q96ME1 805 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms