RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 Q4G0T1 1027 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 EARS2Q5JPH6 523 aaKnown RBP5.71□□□□□ -1.5
CLIP1-217ENST00000543205 CT47A1Q5JQC4 288 aaPredicted RBP5.71□□□□□ -1.5
CLIP1-217ENST00000543205 CELF3Q5SZQ8 465 aaKnown RBP5.71□□□□□ -1.5
CLIP1-217ENST00000543205 TMEM63BQ5T3F8 832 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 GJC2Q5T442 439 aaPredicted RBP5.71□□□□□ -1.5
CLIP1-217ENST00000543205 L1TD1Q5T7N2 865 aaKnown RBP5.71□□□□□ -1.5
CLIP1-217ENST00000543205 FBXL19Q6PCT2 694 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 MOXD1Q6UVY6 613 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 SLCO4C1Q6ZQN7 724 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 CYFIP1Q7L576 1253 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 PCSK9Q8NBP7 692 aaKnown RBP5.71□□□□□ -1.5
CLIP1-217ENST00000543205 PMEPA1Q969W9 287 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 MFSD3Q96ES6 412 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 SPATA33Q96N06 139 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 SDF4Q9BRK5 362 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 ZNF577Q9BSK1 485 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 UPF3AQ9H1J1 476 aaKnown RBP5.71□□□□□ -1.5
CLIP1-217ENST00000543205 CAAP1Q9H8G2 361 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 KCNH7Q9NS40 1196 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 FAM8A1Q9UBU6 413 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 DDX25Q9UHL0 483 aaKnown RBP5.71□□□□□ -1.5
CLIP1-217ENST00000543205 MCM8Q9UJA3 840 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 IGLV3-22A0A075B6J6 115 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 CYP3A7-CYP3A51PA0A087WV96 503 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 DNM1LO00429 736 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 NOP56O00567 594 aaKnown RBP5.7□□□□□ -1.5
CLIP1-217ENST00000543205 STX6O43752 255 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 ATP9AO75110 1047 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 TDP2O95551 362 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 PTGS1P23219 599 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 CYP3A7P24462 503 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 TERF1P54274 439 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 GPLD1P80108 840 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 BEX3Q00994 111 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 ARHGAP1Q07960 439 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 HYAL2Q12891 473 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 PIN1Q13526 163 aaPredicted RBP5.7□□□□□ -1.5
CLIP1-217ENST00000543205 MORC3Q14149 939 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 MLC1Q15049 377 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 KCNA10Q16322 511 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 PCSK7Q16549 785 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 PPP4R3AQ6IN85 833 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 NXPE4Q6UWF7 544 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 HFE2Q6ZVN8 426 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 SUGP1Q8IWZ8 645 aaKnown RBP5.7□□□□□ -1.5
CLIP1-217ENST00000543205 DRC7Q8IY82 874 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 TEX19Q8NA77 164 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 VPS37AQ8NEZ2 397 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 UIMC1Q96RL1 719 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 SRRTQ9BXP5 876 aaKnown RBP5.7□□□□□ -1.5
CLIP1-217ENST00000543205 DNAJC25Q9H1X3 360 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 AGO4Q9HCK5 861 aaKnown RBP5.7□□□□□ -1.5
CLIP1-217ENST00000543205 MCM3APO60318 1980 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 MYADML2A6NDP7 307 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 DDX39AO00148 427 aaKnown RBP5.7□□□□□ -1.5
CLIP1-217ENST00000543205 IPO5O00410 1097 aaKnown RBP5.7□□□□□ -1.5
CLIP1-217ENST00000543205 MSH4O15457 936 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 EDIL3O43854 480 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 KPNA6O60684 536 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 ADAMTS4O75173 837 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 FARP2O94887 1054 aaPredicted RBP5.7□□□□□ -1.5
CLIP1-217ENST00000543205 BAG4O95429 457 aaKnown RBP5.7□□□□□ -1.5
CLIP1-217ENST00000543205 KCNA2P16389 499 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 CST5P28325 142 aaPredicted RBP5.7□□□□□ -1.5
CLIP1-217ENST00000543205 SERPINB3P29508 390 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 MCM7P33993 719 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 NKX3-2P78367 333 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 SP4Q02446 784 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 HLTFQ14527 1009 aaKnown RBP eCLIP5.7□□□□□ -1.5
CLIP1-217ENST00000543205 ZNF174Q15697 407 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 DGKDQ16760 1214 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 RILPL1Q5EBL4 403 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 TTC38Q5R3I4 469 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 METTL7BQ6UX53 244 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 LHFPL2Q6ZUX7 228 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 BRAPQ7Z569 592 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 STRA8Q7Z7C7 330 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 AFAP1L2Q8N4X5 818 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 KLHDC9Q8NEP7 349 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 PPTC7Q8NI37 304 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 AFG1LQ8WV93 481 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 MBOAT7Q96N66 472 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 C11orf49Q9H6J7 331 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 JPH1Q9HDC5 661 aaPredicted RBP5.7□□□□□ -1.5
CLIP1-217ENST00000543205 TBC1D22BQ9NU19 505 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 SLC9A2Q9UBY0 812 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 SLC6A14Q9UN76 642 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 NFASCO94856 1347 aa5.7□□□□□ -1.5
CLIP1-217ENST00000543205 ELOA3CA0A087WX78 387 aaPredicted RBP5.69□□□□□ -1.5
CLIP1-217ENST00000543205 ELOA3DA6NLF2 546 aaPredicted RBP5.69□□□□□ -1.5
CLIP1-217ENST00000543205 ADARB2-AS1A8MUL3 147 aa5.69□□□□□ -1.5
CLIP1-217ENST00000543205 ZBTB42B2RXF5 422 aa5.69□□□□□ -1.5
CLIP1-217ENST00000543205 CTAGE5O15320 804 aa5.69□□□□□ -1.5
CLIP1-217ENST00000543205 SLC37A4O43826 429 aa5.69□□□□□ -1.5
CLIP1-217ENST00000543205 NEMFO60524 1076 aa5.69□□□□□ -1.5
CLIP1-217ENST00000543205 GAS7O60861 476 aa5.69□□□□□ -1.5
CLIP1-217ENST00000543205 TCEA3O75764 348 aa5.69□□□□□ -1.5
CLIP1-217ENST00000543205 GHRHP01286 108 aa5.69□□□□□ -1.5
CLIP1-217ENST00000543205 ASGR1P07306 291 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms