RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 INMTO95050 263 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 ARIH2O95376 493 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 MYCLP12524 364 aaPredicted RBP6.17□□□□□ -1.42
PRKDC-209ENST00000540819 CKMT1AP12532 417 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 ATP1A3P13637 1013 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 LCP1P13796 627 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 MAN2A2P49641 1150 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 KIF11P52732 1056 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 MOGSQ13724 837 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 DAG1Q14118 895 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 SPARCL1Q14515 664 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 SSPNQ14714 243 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 NFIXQ14938 502 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 PLCB4Q15147 1175 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.17□□□□□ -1.42
PRKDC-209ENST00000540819 SLC10A5Q5PT55 438 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 CFAP58Q5T655 872 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 HHIPL2Q6UWX4 724 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 ENOSF1Q7L5Y1 443 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 LIX1LQ8IVB5 337 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 CCDC33Q8N5R6 958 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 ZNF655Q8N720 491 aaPredicted RBP6.17□□□□□ -1.42
PRKDC-209ENST00000540819 PPM1NQ8N819 430 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 ATG16L2Q8NAA4 619 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 RCBTB1Q8NDN9 531 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 ZMIZ2Q8NF64 920 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 VMP1Q96GC9 406 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 RAX2Q96IS3 184 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 MAP6Q96JE9 813 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 KCNC2Q96PR1 638 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 SDF4Q9BRK5 362 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 MCMBPQ9BTE3 642 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 G6PC3Q9BUM1 346 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 SORBS1Q9BX66 1292 aaKnown RBP6.17□□□□□ -1.42
PRKDC-209ENST00000540819 STK33Q9BYT3 514 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 CCDC68Q9H2F9 335 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 ELAC1Q9H777 363 aaKnown RBP6.17□□□□□ -1.42
PRKDC-209ENST00000540819 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.17□□□□□ -1.42
PRKDC-209ENST00000540819 AASSQ9UDR5 926 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 TCFL5Q9UL49 500 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 JAG2Q9Y219 1238 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 ZNF281Q9Y2X9 895 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 B4DLN1 442 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 H0Y8X5 98 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 HRKO00198 91 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 SYT5O00445 386 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 ABLIM1O14639 778 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 DKC1O60832 514 aaKnown RBP eCLIP6.16□□□□□ -1.42
PRKDC-209ENST00000540819 SOAT2O75908 522 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 PNLIPP16233 465 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 PDE6AP16499 860 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 SYN1P17600 705 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 PI3P19957 117 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 PSMA3P25788 255 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 ITGA8P53708 1063 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 PLIN5Q00G26 463 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 TLE2Q04725 743 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 ARL13BQ3SXY8 428 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 ERICH6BQ5W0A0 696 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 FAM205BPQ63HN1 556 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 HEATR4Q86WZ0 1026 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 CXorf67Q86X51 503 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-209ENST00000540819 LINC00116Q8NCU8 138 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 SIMC1Q8NDZ2 872 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 UCMAQ8WVF2 138 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 AUTS2Q8WXX7 1259 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 SECISBP2LQ93073 1101 aaKnown RBP6.16□□□□□ -1.42
PRKDC-209ENST00000540819 ASB2Q96Q27 587 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 FAM167BQ9BTA0 163 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 HDAC8Q9BY41 377 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 KRTAP4-5Q9BYR2 181 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 SMURF1Q9HCE7 757 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 GIMAP2Q9UG22 337 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 MBD1Q9UIS9 605 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-209ENST00000540819 MSRAQ9UJ68 235 aa6.16□□□□□ -1.42
PRKDC-209ENST00000540819 GTPBP10A4D1E9 387 aaKnown RBP6.15□□□□□ -1.42
PRKDC-209ENST00000540819 CCDC154A6NI56 674 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 NOTOA8MTQ0 251 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 SMTNL1A8MU46 457 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 ACKR2O00590 384 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 N4BP3O15049 544 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 PHGDHO43175 533 aaKnown RBP6.15□□□□□ -1.42
PRKDC-209ENST00000540819 HTRA2O43464 458 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-209ENST00000540819 SIGLEC6O43699 453 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 BAG2O95816 211 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 GSNP06396 782 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 CD3EP07766 207 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 SYPP08247 313 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 HARSP12081 509 aaKnown RBP6.15□□□□□ -1.42
PRKDC-209ENST00000540819 PLS3P13797 630 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 SERPINF1P36955 418 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 PIK3CAP42336 1068 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 NPTX2P47972 431 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 TUBP50607 506 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 AFF3P51826 1226 aaKnown RBP6.15□□□□□ -1.42
PRKDC-209ENST00000540819 DRG2P55039 364 aaKnown RBP6.15□□□□□ -1.42
PRKDC-209ENST00000540819 MANFP55145 182 aaKnown RBP6.15□□□□□ -1.42
PRKDC-209ENST00000540819 BCAR1P56945 870 aa6.15□□□□□ -1.42
PRKDC-209ENST00000540819 SNW1Q13573 536 aaKnown RBP6.15□□□□□ -1.42
PRKDC-209ENST00000540819 EFR3AQ14156 821 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms