RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 MCPH1Q8NEM0 835 aa12.19□□□□□ -0.46
LGR5-203ENST00000540815 ARHGEF26Q96DR7 871 aa12.19□□□□□ -0.46
LGR5-203ENST00000540815 THOC1Q96FV9 657 aaKnown RBP12.19□□□□□ -0.46
LGR5-203ENST00000540815 SEPT11Q9NVA2 429 aaKnown RBP12.19□□□□□ -0.46
LGR5-203ENST00000540815 TAS2R14Q9NYV8 317 aa12.19□□□□□ -0.46
LGR5-203ENST00000540815 GGA3Q9NZ52 723 aa12.19□□□□□ -0.46
LGR5-203ENST00000540815 NOC2LQ9Y3T9 749 aaKnown RBP12.19□□□□□ -0.46
LGR5-203ENST00000540815 AFG3L2Q9Y4W6 797 aa12.19□□□□□ -0.46
LGR5-203ENST00000540815 PFASO15067 1338 aa12.19□□□□□ -0.46
LGR5-203ENST00000540815 ENO4A6NNW6 628 aa12.19□□□□□ -0.46
LGR5-203ENST00000540815 RAD51CO43502 376 aa12.19□□□□□ -0.46
LGR5-203ENST00000540815 ABCB4P21439 1286 aa12.19□□□□□ -0.46
LGR5-203ENST00000540815 HADHBP55084 474 aaKnown RBP12.19□□□□□ -0.46
LGR5-203ENST00000540815 ENPEPQ07075 957 aa12.19□□□□□ -0.46
LGR5-203ENST00000540815 GNPTABQ3T906 1256 aa12.19□□□□□ -0.46
LGR5-203ENST00000540815 ALS2CLQ60I27 953 aa12.19□□□□□ -0.46
LGR5-203ENST00000540815 ABHD15Q6UXT9 468 aa12.19□□□□□ -0.46
LGR5-203ENST00000540815 PALB2Q86YC2 1186 aa12.19□□□□□ -0.46
LGR5-203ENST00000540815 TMC2Q8TDI7 906 aa12.19□□□□□ -0.46
LGR5-203ENST00000540815 ZNF473Q8WTR7 871 aaKnown RBP12.19□□□□□ -0.46
LGR5-203ENST00000540815 SLC20A1Q8WUM9 679 aa12.19□□□□□ -0.46
LGR5-203ENST00000540815 CCDC114Q96M63 670 aa12.19□□□□□ -0.46
LGR5-203ENST00000540815 MFSD14AQ96MC6 490 aa12.19□□□□□ -0.46
LGR5-203ENST00000540815 FBXL18Q96ME1 805 aa12.19□□□□□ -0.46
LGR5-203ENST00000540815 ISCUQ9H1K1 167 aa12.19□□□□□ -0.46
LGR5-203ENST00000540815 HOXC10Q9NYD6 342 aa12.19□□□□□ -0.46
LGR5-203ENST00000540815 DIS3Q9Y2L1 958 aaKnown RBP12.19□□□□□ -0.46
LGR5-203ENST00000540815 COQ4Q9Y3A0 265 aa12.19□□□□□ -0.46
LGR5-203ENST00000540815 MYH9P35579 1960 aaKnown RBP12.18□□□□□ -0.46
LGR5-203ENST00000540815 SPDYE16A6NNV3 312 aaPredicted RBP12.18□□□□□ -0.46
LGR5-203ENST00000540815 CCDC188H7C350 402 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 CARSP49589 748 aaKnown RBP12.18□□□□□ -0.46
LGR5-203ENST00000540815 ACTR2P61160 394 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 PTPROQ16827 1216 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 SH3D19Q5HYK7 790 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 KRT39Q6A163 491 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 SLC39A4Q6P5W5 647 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 RHOT2Q8IXI1 618 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 KLHL7Q8IXQ5 586 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 FAM71AQ8IYT1 594 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 EIF1ADQ8N9N8 165 aaKnown RBP12.18□□□□□ -0.46
LGR5-203ENST00000540815 PARD3BQ8TEW8 1205 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 CASKIN2Q8WXE0 1202 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 SAAL1Q96ER3 474 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 RUFY1Q96T51 708 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 THAP2Q9H0W7 228 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 KIF9Q9HAQ2 790 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 TMEM8AQ9HCN3 771 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 GPRC5DQ9NZD1 345 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 TTC7AQ9ULT0 858 aaPredicted RBP12.18□□□□□ -0.46
LGR5-203ENST00000540815 FAM170AA1A519 330 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 PEX10O60683 326 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 TMOD1P28289 359 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 GTF2H1P32780 548 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 PRKCEQ02156 737 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 MAP2K1Q02750 393 aaPredicted RBP12.18□□□□□ -0.46
LGR5-203ENST00000540815 PREPLQ4J6C6 727 aaPredicted RBP12.18□□□□□ -0.46
LGR5-203ENST00000540815 MIS18BP1Q6P0N0 1132 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 CCDC60Q8IWA6 550 aaPredicted RBP12.18□□□□□ -0.46
LGR5-203ENST00000540815 RPUSD2Q8IZ73 545 aaKnown RBP12.18□□□□□ -0.46
LGR5-203ENST00000540815 OR2W6PQ8NHA6 318 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 CCT8L2Q96SF2 557 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 ATP6V0A4Q9HBG4 840 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 XPNPEP1Q9NQW7 623 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 CYP26B1Q9NR63 512 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 SEPT9Q9UHD8 586 aaPredicted RBP12.18□□□□□ -0.46
LGR5-203ENST00000540815 NFU1Q9UMS0 254 aa12.18□□□□□ -0.46
LGR5-203ENST00000540815 DICER1Q9UPY3 1922 aaKnown RBP12.17□□□□□ -0.46
LGR5-203ENST00000540815 BHMG1C9JSJ3 638 aaPredicted RBP12.17□□□□□ -0.46
LGR5-203ENST00000540815 PPP1R12AO14974 1030 aaPredicted RBP12.17□□□□□ -0.46
LGR5-203ENST00000540815 DDX3YO15523 660 aaKnown RBP12.17□□□□□ -0.46
LGR5-203ENST00000540815 SORBS3O60504 671 aa12.17□□□□□ -0.46
LGR5-203ENST00000540815 ABCD1P33897 745 aa12.17□□□□□ -0.46
LGR5-203ENST00000540815 GPC3P51654 580 aa12.17□□□□□ -0.46
LGR5-203ENST00000540815 MFAP3P55082 362 aa12.17□□□□□ -0.46
LGR5-203ENST00000540815 SNX1Q13596 522 aa12.17□□□□□ -0.46
LGR5-203ENST00000540815 QPCTQ16769 361 aa12.17□□□□□ -0.46
LGR5-203ENST00000540815 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.17□□□□□ -0.46
LGR5-203ENST00000540815 SEMA4DQ92854 862 aa12.17□□□□□ -0.46
LGR5-203ENST00000540815 KAT5Q92993 513 aa12.17□□□□□ -0.46
LGR5-203ENST00000540815 KREMEN1Q96MU8 473 aa12.17□□□□□ -0.46
LGR5-203ENST00000540815 ADGRA3Q8IWK6 1321 aa12.17□□□□□ -0.46
LGR5-203ENST00000540815 H0YCG3 227 aa12.17□□□□□ -0.46
LGR5-203ENST00000540815 SUPT20HL2P0C7V6 817 aa12.17□□□□□ -0.46
LGR5-203ENST00000540815 GARTP22102 1010 aa12.17□□□□□ -0.46
LGR5-203ENST00000540815 CYP24A1Q07973 514 aa12.17□□□□□ -0.46
LGR5-203ENST00000540815 FSTL1Q12841 308 aa12.17□□□□□ -0.46
LGR5-203ENST00000540815 SUPT20HL1Q3ZLR7 823 aa12.17□□□□□ -0.46
LGR5-203ENST00000540815 USP37Q86T82 979 aa12.17□□□□□ -0.46
LGR5-203ENST00000540815 MREGQ8N565 214 aa12.17□□□□□ -0.46
LGR5-203ENST00000540815 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.17□□□□□ -0.46
LGR5-203ENST00000540815 WHAMMQ8TF30 809 aa12.17□□□□□ -0.46
LGR5-203ENST00000540815 SHC3Q92529 594 aa12.17□□□□□ -0.46
LGR5-203ENST00000540815 NOCTQ9UK39 431 aaKnown RBP12.17□□□□□ -0.46
LGR5-203ENST00000540815 TPX2Q9ULW0 747 aaKnown RBP12.17□□□□□ -0.46
LGR5-203ENST00000540815 PTPRFP10586 1907 aa12.17□□□□□ -0.46
LGR5-203ENST00000540815 A0A0G2JMZ2 1700 aa12.17□□□□□ -0.46
LGR5-203ENST00000540815 SIP14410 1827 aa12.16□□□□□ -0.46
LGR5-203ENST00000540815 KRIT1O00522 736 aa12.16□□□□□ -0.46
LGR5-203ENST00000540815 HSF2BPO75031 334 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms