RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 HIDE1A8MVS5 230 aa12.58□□□□□ -0.4
TMEM258-205ENST00000540434 B4GALT3O60512 393 aa12.58□□□□□ -0.4
TMEM258-205ENST00000540434 PPP6R2O75170 966 aa12.58□□□□□ -0.4
TMEM258-205ENST00000540434 YEATS4O95619 227 aa12.58□□□□□ -0.4
TMEM258-205ENST00000540434 STAG3L1P0CL83 205 aa12.58□□□□□ -0.4
TMEM258-205ENST00000540434 ZSCAN20P17040 1043 aaPredicted RBP12.58□□□□□ -0.4
TMEM258-205ENST00000540434 HOXB8P17481 243 aaPredicted RBP12.58□□□□□ -0.4
TMEM258-205ENST00000540434 SFPQP23246 707 aaKnown RBP eCLIP12.58□□□□□ -0.4
TMEM258-205ENST00000540434 GUCY2CP25092 1073 aa12.58□□□□□ -0.4
TMEM258-205ENST00000540434 NPTX2P47972 431 aa12.58□□□□□ -0.4
TMEM258-205ENST00000540434 PEX3P56589 373 aa12.58□□□□□ -0.4
TMEM258-205ENST00000540434 GIT2Q14161 759 aa12.58□□□□□ -0.4
TMEM258-205ENST00000540434 EEF1DP3Q658K8 133 aa12.58□□□□□ -0.4
TMEM258-205ENST00000540434 AGMOQ6ZNB7 445 aa12.58□□□□□ -0.4
TMEM258-205ENST00000540434 DENND4AQ7Z401 1863 aa12.58□□□□□ -0.4
TMEM258-205ENST00000540434 RNF169Q8NCN4 708 aa12.58□□□□□ -0.4
TMEM258-205ENST00000540434 STAMQ92783 540 aa12.58□□□□□ -0.4
TMEM258-205ENST00000540434 REEP2Q9BRK0 252 aa12.58□□□□□ -0.4
TMEM258-205ENST00000540434 NFKBIZQ9BYH8 718 aa12.58□□□□□ -0.4
TMEM258-205ENST00000540434 CWH43Q9H720 699 aa12.58□□□□□ -0.4
TMEM258-205ENST00000540434 C1orf112Q9NSG2 853 aa12.58□□□□□ -0.4
TMEM258-205ENST00000540434 FAM105AQ9NUU6 356 aa12.58□□□□□ -0.4
TMEM258-205ENST00000540434 TMEM161AQ9NX61 479 aa12.58□□□□□ -0.4
TMEM258-205ENST00000540434 HES2Q9Y543 173 aa12.58□□□□□ -0.4
TMEM258-205ENST00000540434 PCDHB7Q9Y5E2 793 aa12.58□□□□□ -0.4
TMEM258-205ENST00000540434 PCDHB12Q9Y5F1 795 aa12.58□□□□□ -0.4
TMEM258-205ENST00000540434 MYMKA6NI61 221 aa12.57□□□□□ -0.4
TMEM258-205ENST00000540434 TBKBP1A7MCY6 615 aa12.57□□□□□ -0.4
TMEM258-205ENST00000540434 LIG1P18858 919 aa12.57□□□□□ -0.4
TMEM258-205ENST00000540434 TFDP1Q14186 410 aa12.57□□□□□ -0.4
TMEM258-205ENST00000540434 BECN1Q14457 450 aa12.57□□□□□ -0.4
TMEM258-205ENST00000540434 E2F4Q16254 413 aa12.57□□□□□ -0.4
TMEM258-205ENST00000540434 SPOUT1Q5T280 376 aaKnown RBP12.57□□□□□ -0.4
TMEM258-205ENST00000540434 TWF2Q6IBS0 349 aaKnown RBP12.57□□□□□ -0.4
TMEM258-205ENST00000540434 MRPL10Q7Z7H8 261 aaKnown RBP12.57□□□□□ -0.4
TMEM258-205ENST00000540434 GPBP1Q86WP2 473 aa12.57□□□□□ -0.4
TMEM258-205ENST00000540434 SIX5Q8N196 739 aa12.57□□□□□ -0.4
TMEM258-205ENST00000540434 PDILTQ8N807 584 aa12.57□□□□□ -0.4
TMEM258-205ENST00000540434 C12orf76Q8N812 135 aaPredicted RBP12.57□□□□□ -0.4
TMEM258-205ENST00000540434 HELQQ8TDG4 1101 aa12.57□□□□□ -0.4
TMEM258-205ENST00000540434 LEO1Q8WVC0 666 aaPredicted RBP12.57□□□□□ -0.4
TMEM258-205ENST00000540434 CALML4Q96GE6 196 aa12.57□□□□□ -0.4
TMEM258-205ENST00000540434 CDK5RAP3Q96JB5 506 aa12.57□□□□□ -0.4
TMEM258-205ENST00000540434 FIZ1Q96SL8 496 aa12.57□□□□□ -0.4
TMEM258-205ENST00000540434 TRAIPQ9BWF2 469 aa12.57□□□□□ -0.4
TMEM258-205ENST00000540434 NT5C3AQ9H0P0 336 aa12.57□□□□□ -0.4
TMEM258-205ENST00000540434 IKZF4Q9H2S9 585 aa12.57□□□□□ -0.4
TMEM258-205ENST00000540434 SEMA4AQ9H3S1 761 aa12.57□□□□□ -0.4
TMEM258-205ENST00000540434 ELAC1Q9H777 363 aaKnown RBP12.57□□□□□ -0.4
TMEM258-205ENST00000540434 GDPD2Q9HCC8 539 aa12.57□□□□□ -0.4
TMEM258-205ENST00000540434 CHST12Q9NRB3 414 aa12.57□□□□□ -0.4
TMEM258-205ENST00000540434 TYW1Q9NV66 732 aaKnown RBP12.57□□□□□ -0.4
TMEM258-205ENST00000540434 MIOSQ9NXC5 875 aa12.57□□□□□ -0.4
TMEM258-205ENST00000540434 LRFN2Q9ULH4 789 aa12.57□□□□□ -0.4
TMEM258-205ENST00000540434 PCDHB2Q9Y5E7 798 aa12.57□□□□□ -0.4
TMEM258-205ENST00000540434 A0A1B0GUA9 196 aa12.56□□□□□ -0.4
TMEM258-205ENST00000540434 STK25O00506 426 aa12.56□□□□□ -0.4
TMEM258-205ENST00000540434 SLC16A4O15374 487 aa12.56□□□□□ -0.4
TMEM258-205ENST00000540434 ZNF623O75123 536 aa12.56□□□□□ -0.4
TMEM258-205ENST00000540434 PBX3P40426 434 aa12.56□□□□□ -0.4
TMEM258-205ENST00000540434 NAMPTP43490 491 aa12.56□□□□□ -0.4
TMEM258-205ENST00000540434 ODR4Q5SWX8 454 aa12.56□□□□□ -0.4
TMEM258-205ENST00000540434 KIAA0319Q5VV43 1072 aa12.56□□□□□ -0.4
TMEM258-205ENST00000540434 ZDHHC14Q8IZN3 488 aa12.56□□□□□ -0.4
TMEM258-205ENST00000540434 COLGALT1Q8NBJ5 622 aa12.56□□□□□ -0.4
TMEM258-205ENST00000540434 SUMF1Q8NBK3 374 aa12.56□□□□□ -0.4
TMEM258-205ENST00000540434 LARP4BQ92615 738 aaKnown RBP12.56□□□□□ -0.4
TMEM258-205ENST00000540434 KIFAP3Q92845 792 aa12.56□□□□□ -0.4
TMEM258-205ENST00000540434 DNAJC19Q96DA6 116 aa12.56□□□□□ -0.4
TMEM258-205ENST00000540434 ZBTB45Q96K62 511 aaPredicted RBP12.56□□□□□ -0.4
TMEM258-205ENST00000540434 RTP3Q9BQQ7 232 aa12.56□□□□□ -0.4
TMEM258-205ENST00000540434 ADAM7Q9H2U9 754 aa12.56□□□□□ -0.4
TMEM258-205ENST00000540434 ARHGAP28Q9P2N2 729 aa12.56□□□□□ -0.4
TMEM258-205ENST00000540434 LZTS1Q9Y250 596 aa12.56□□□□□ -0.4
TMEM258-205ENST00000540434 CCDC169A6NNP5 214 aa12.55□□□□□ -0.4
TMEM258-205ENST00000540434 SLC26A4O43511 780 aa12.55□□□□□ -0.4
TMEM258-205ENST00000540434 NARSO43776 548 aaKnown RBP12.55□□□□□ -0.4
TMEM258-205ENST00000540434 CUTAO60888 179 aa12.55□□□□□ -0.4
TMEM258-205ENST00000540434 OFD1O75665 1012 aa12.55□□□□□ -0.4
TMEM258-205ENST00000540434 PRKCBP05771 671 aa12.55□□□□□ -0.4
TMEM258-205ENST00000540434 ADRB1P08588 477 aa12.55□□□□□ -0.4
TMEM258-205ENST00000540434 SP9P0CG40 484 aa12.55□□□□□ -0.4
TMEM258-205ENST00000540434 SRGAP2BP0DMP2 458 aa12.55□□□□□ -0.4
TMEM258-205ENST00000540434 CASP1P29466 404 aa12.55□□□□□ -0.4
TMEM258-205ENST00000540434 PLCB3Q01970 1234 aa12.55□□□□□ -0.4
TMEM258-205ENST00000540434 ACAP1Q15027 740 aa12.55□□□□□ -0.4
TMEM258-205ENST00000540434 FAM187BQ17R55 369 aa12.55□□□□□ -0.4
TMEM258-205ENST00000540434 RRAGBQ5VZM2 374 aa12.55□□□□□ -0.4
TMEM258-205ENST00000540434 PPP4R3CPQ6ZMV5 832 aa12.55□□□□□ -0.4
TMEM258-205ENST00000540434 DYMQ7RTS9 669 aa12.55□□□□□ -0.4
TMEM258-205ENST00000540434 THNSL1Q8IYQ7 743 aa12.55□□□□□ -0.4
TMEM258-205ENST00000540434 TDRD5Q8NAT2 981 aaKnown RBP12.55□□□□□ -0.4
TMEM258-205ENST00000540434 TMEM161BQ8NDZ6 487 aa12.55□□□□□ -0.4
TMEM258-205ENST00000540434 MRPS27Q92552 414 aaKnown RBP12.55□□□□□ -0.4
TMEM258-205ENST00000540434 NECTIN4Q96NY8 510 aa12.55□□□□□ -0.4
TMEM258-205ENST00000540434 NTPCRQ9BSD7 190 aaKnown RBP12.55□□□□□ -0.4
TMEM258-205ENST00000540434 FGFBP2Q9BYJ0 223 aa12.55□□□□□ -0.4
TMEM258-205ENST00000540434 HAPLN2Q9GZV7 340 aa12.55□□□□□ -0.4
TMEM258-205ENST00000540434 NXF3Q9H4D5 531 aaKnown RBP12.55□□□□□ -0.4
TMEM258-205ENST00000540434 PDZD7Q9H5P4 517 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms