RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 ZNF852Q6ZMS4 543 aa8.94□□□□□ -0.98
LRP6-204ENST00000540415 SYNE3Q6ZMZ3 975 aa8.94□□□□□ -0.98
LRP6-204ENST00000540415 LNX1Q8TBB1 728 aaPredicted RBP8.94□□□□□ -0.98
LRP6-204ENST00000540415 SLC7A14Q8TBB6 771 aa8.94□□□□□ -0.98
LRP6-204ENST00000540415 RIT2Q99578 217 aa8.94□□□□□ -0.98
LRP6-204ENST00000540415 COLEC11Q9BWP8 271 aa8.94□□□□□ -0.98
LRP6-204ENST00000540415 GLT8D2Q9H1C3 349 aa8.94□□□□□ -0.98
LRP6-204ENST00000540415 CXCL16Q9H2A7 254 aa8.94□□□□□ -0.98
LRP6-204ENST00000540415 CHRDQ9H2X0 955 aa8.94□□□□□ -0.98
LRP6-204ENST00000540415 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.94□□□□□ -0.98
LRP6-204ENST00000540415 C2orf42Q9NWW7 574 aa8.94□□□□□ -0.98
LRP6-204ENST00000540415 SMG1Q96Q15 3661 aaKnown RBP8.94□□□□□ -0.98
LRP6-204ENST00000540415 MYH15Q9Y2K3 1946 aa8.93□□□□□ -0.98
LRP6-204ENST00000540415 LAMA5O15230 3695 aa8.93□□□□□ -0.98
LRP6-204ENST00000540415 KLF18A0A0U1RQI7 1052 aa8.93□□□□□ -0.98
LRP6-204ENST00000540415 ESYT2A0FGR8 921 aa8.93□□□□□ -0.98
LRP6-204ENST00000540415 CASTOR2A6NHX0 329 aa8.93□□□□□ -0.98
LRP6-204ENST00000540415 C1QTNF9BB2RNN3 333 aa8.93□□□□□ -0.98
LRP6-204ENST00000540415 EML1O00423 815 aa8.93□□□□□ -0.98
LRP6-204ENST00000540415 ZBTB39O15060 712 aa8.93□□□□□ -0.98
LRP6-204ENST00000540415 NCAM2O15394 837 aa8.93□□□□□ -0.98
LRP6-204ENST00000540415 TADA2AO75478 443 aa8.93□□□□□ -0.98
LRP6-204ENST00000540415 C1RP00736 705 aa8.93□□□□□ -0.98
LRP6-204ENST00000540415 HNRNPA1P09651 372 aaKnown RBP eCLIP8.93□□□□□ -0.98
LRP6-204ENST00000540415 C1QTNF9P0C862 333 aa8.93□□□□□ -0.98
LRP6-204ENST00000540415 FCARP24071 287 aa8.93□□□□□ -0.98
LRP6-204ENST00000540415 EXOSC10Q01780 885 aaKnown RBP8.93□□□□□ -0.98
LRP6-204ENST00000540415 SIM2Q14190 667 aaPredicted RBP8.93□□□□□ -0.98
LRP6-204ENST00000540415 NECTIN1Q15223 517 aa8.93□□□□□ -0.98
LRP6-204ENST00000540415 PSMD5Q16401 504 aa8.93□□□□□ -0.98
LRP6-204ENST00000540415 PABPC1LQ4VXU2 614 aaKnown RBP8.93□□□□□ -0.98
LRP6-204ENST00000540415 AXDND1Q5T1B0 1012 aaPredicted RBP8.93□□□□□ -0.98
LRP6-204ENST00000540415 HEATR6Q6AI08 1181 aaKnown RBP8.93□□□□□ -0.98
LRP6-204ENST00000540415 SRGAP1Q7Z6B7 1085 aa8.93□□□□□ -0.98
LRP6-204ENST00000540415 CEP57Q86XR8 500 aa8.93□□□□□ -0.98
LRP6-204ENST00000540415 CELF5Q8N6W0 485 aaKnown RBP8.93□□□□□ -0.98
LRP6-204ENST00000540415 RNF149Q8NC42 400 aa8.93□□□□□ -0.98
LRP6-204ENST00000540415 FAM126AQ9BYI3 521 aaPredicted RBP8.93□□□□□ -0.98
LRP6-204ENST00000540415 LMAN1LQ9HAT1 526 aa8.93□□□□□ -0.98
LRP6-204ENST00000540415 C6orf50Q9HD87 102 aa8.93□□□□□ -0.98
LRP6-204ENST00000540415 MIA3Q5JRA6 1907 aa8.93□□□□□ -0.98
LRP6-204ENST00000540415 DOCK6Q96HP0 2047 aa8.93□□□□□ -0.98
LRP6-204ENST00000540415 AKAP13Q12802 2813 aa8.93□□□□□ -0.98
LRP6-204ENST00000540415 NBEAQ8NFP9 2946 aa8.93□□□□□ -0.98
LRP6-204ENST00000540415 LAMA1P25391 3075 aa8.92□□□□□ -0.98
LRP6-204ENST00000540415 PKD1L2Q7Z442 2459 aa8.92□□□□□ -0.98
LRP6-204ENST00000540415 CNOT1A5YKK6 2376 aaKnown RBP8.92□□□□□ -0.98
LRP6-204ENST00000540415 NCANO14594 1321 aa8.92□□□□□ -0.98
LRP6-204ENST00000540415 TM4SF5O14894 197 aa8.92□□□□□ -0.98
LRP6-204ENST00000540415 B4GALT5O43286 388 aa8.92□□□□□ -0.98
LRP6-204ENST00000540415 LRP3O75074 770 aa8.92□□□□□ -0.98
LRP6-204ENST00000540415 XYLBO75191 536 aa8.92□□□□□ -0.98
LRP6-204ENST00000540415 ECI2O75521 394 aa8.92□□□□□ -0.98
LRP6-204ENST00000540415 KIF4AO95239 1232 aa8.92□□□□□ -0.98
LRP6-204ENST00000540415 PROS1P07225 676 aa8.92□□□□□ -0.98
LRP6-204ENST00000540415 SHC2P98077 582 aa8.92□□□□□ -0.98
LRP6-204ENST00000540415 ACAP1Q15027 740 aa8.92□□□□□ -0.98
LRP6-204ENST00000540415 AMHR2Q16671 573 aa8.92□□□□□ -0.98
LRP6-204ENST00000540415 ADCK5Q3MIX3 580 aa8.92□□□□□ -0.98
LRP6-204ENST00000540415 WDR44Q5JSH3 913 aa8.92□□□□□ -0.98
LRP6-204ENST00000540415 FAM171A1Q5VUB5 890 aa8.92□□□□□ -0.98
LRP6-204ENST00000540415 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.92□□□□□ -0.98
LRP6-204ENST00000540415 GPR65Q8IYL9 337 aa8.92□□□□□ -0.98
LRP6-204ENST00000540415 PIK3R5Q8WYR1 880 aa8.92□□□□□ -0.98
LRP6-204ENST00000540415 TCEAL4Q96EI5 215 aa8.92□□□□□ -0.98
LRP6-204ENST00000540415 NELL2Q99435 816 aa8.92□□□□□ -0.98
LRP6-204ENST00000540415 TTPALQ9BTX7 342 aa8.92□□□□□ -0.98
LRP6-204ENST00000540415 CSRNP2Q9H175 543 aa8.92□□□□□ -0.98
LRP6-204ENST00000540415 SMOC1Q9H4F8 434 aa8.92□□□□□ -0.98
LRP6-204ENST00000540415 UBN1Q9NPG3 1134 aa8.92□□□□□ -0.98
LRP6-204ENST00000540415 RBM12Q9NTZ6 932 aaKnown RBP8.92□□□□□ -0.98
LRP6-204ENST00000540415 VPS54Q9P1Q0 977 aa8.92□□□□□ -0.98
LRP6-204ENST00000540415 ZMIZ1Q9ULJ6 1067 aa8.92□□□□□ -0.98
LRP6-204ENST00000540415 NAP1L2Q9ULW6 460 aaPredicted RBP8.92□□□□□ -0.98
LRP6-204ENST00000540415 MRPS23Q9Y3D9 190 aaKnown RBP8.92□□□□□ -0.98
LRP6-204ENST00000540415 SETXQ7Z333 2677 aaKnown RBP8.92□□□□□ -0.98
LRP6-204ENST00000540415 DSPP15924 2871 aaKnown RBP8.91□□□□□ -0.98
LRP6-204ENST00000540415 ITPR1Q14643 2758 aa8.91□□□□□ -0.98
LRP6-204ENST00000540415 SF3B1O75533 1304 aaKnown RBP eCLIP8.91□□□□□ -0.98
LRP6-204ENST00000540415 K7ESF4 209 aa8.91□□□□□ -0.98
LRP6-204ENST00000540415 NR1I2O75469 434 aa8.91□□□□□ -0.98
LRP6-204ENST00000540415 ERLIN2O94905 339 aa8.91□□□□□ -0.98
LRP6-204ENST00000540415 NPTXRO95502 500 aa8.91□□□□□ -0.98
LRP6-204ENST00000540415 RHOP08100 348 aa8.91□□□□□ -0.98
LRP6-204ENST00000540415 CPA1P15085 419 aa8.91□□□□□ -0.98
LRP6-204ENST00000540415 ARF4P18085 180 aaPredicted RBP8.91□□□□□ -0.98
LRP6-204ENST00000540415 SPINK2P20155 84 aa8.91□□□□□ -0.98
LRP6-204ENST00000540415 HOXA9P31269 272 aa8.91□□□□□ -0.98
LRP6-204ENST00000540415 OR1D2P34982 312 aa8.91□□□□□ -0.98
LRP6-204ENST00000540415 NRLP54845 237 aa8.91□□□□□ -0.98
LRP6-204ENST00000540415 PSMC5P62195 406 aa8.91□□□□□ -0.98
LRP6-204ENST00000540415 HSP90AA2PQ14568 343 aaPredicted RBP8.91□□□□□ -0.98
LRP6-204ENST00000540415 AASDHQ4L235 1098 aaPredicted RBP8.91□□□□□ -0.98
LRP6-204ENST00000540415 FAM78AQ5JUQ0 283 aa8.91□□□□□ -0.98
LRP6-204ENST00000540415 IL31Q6EBC2 164 aa8.91□□□□□ -0.98
LRP6-204ENST00000540415 Q6ZS52 159 aa8.91□□□□□ -0.98
LRP6-204ENST00000540415 FERMT3Q86UX7 667 aa8.91□□□□□ -0.98
LRP6-204ENST00000540415 RASEFQ8IZ41 740 aa8.91□□□□□ -0.98
LRP6-204ENST00000540415 FAM160A2Q8N612 972 aaPredicted RBP8.91□□□□□ -0.98
LRP6-204ENST00000540415 CNNM3Q8NE01 707 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms