RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 GJB4Q9NTQ9 266 aa22.16■■□□□ 1.14
LPCAT3-210ENST00000540090 B4GALT5O43286 388 aa22.15■■□□□ 1.14
LPCAT3-210ENST00000540090 CDKL5O76039 1030 aa22.15■■□□□ 1.14
LPCAT3-210ENST00000540090 NPTXRO95502 500 aa22.15■■□□□ 1.14
LPCAT3-210ENST00000540090 GLULP15104 373 aa22.15■■□□□ 1.14
LPCAT3-210ENST00000540090 FSHRP23945 695 aa22.15■■□□□ 1.14
LPCAT3-210ENST00000540090 SCRN1Q12765 414 aa22.15■■□□□ 1.14
LPCAT3-210ENST00000540090 RTP2Q5QGT7 225 aa22.15■■□□□ 1.14
LPCAT3-210ENST00000540090 ZC3H14Q6PJT7 736 aaKnown RBP22.15■■□□□ 1.14
LPCAT3-210ENST00000540090 PRSS55Q6UWB4 352 aaPredicted RBP22.15■■□□□ 1.14
LPCAT3-210ENST00000540090 CDR2LQ86X02 465 aaPredicted RBP22.15■■□□□ 1.14
LPCAT3-210ENST00000540090 ST13P5Q8NFI4 369 aaPredicted RBP22.15■■□□□ 1.14
LPCAT3-210ENST00000540090 KLK14Q9P0G3 267 aa22.15■■□□□ 1.14
LPCAT3-210ENST00000540090 PARP2Q9UGN5 583 aa22.15■■□□□ 1.14
LPCAT3-210ENST00000540090 FBXW11Q9UKB1 542 aa22.15■■□□□ 1.14
LPCAT3-210ENST00000540090 SF3B1O75533 1304 aaKnown RBP eCLIP22.14■■□□□ 1.14
LPCAT3-210ENST00000540090 STK36Q9NRP7 1315 aa22.14■■□□□ 1.14
LPCAT3-210ENST00000540090 GPC5P78333 572 aa22.14■■□□□ 1.13
LPCAT3-210ENST00000540090 HSP90AA2PQ14568 343 aaPredicted RBP22.14■■□□□ 1.13
LPCAT3-210ENST00000540090 GRASPQ7Z6J2 395 aaPredicted RBP22.14■■□□□ 1.13
LPCAT3-210ENST00000540090 KIAA2013Q8IYS2 634 aa22.14■■□□□ 1.13
LPCAT3-210ENST00000540090 PJA1Q8NG27 643 aa22.14■■□□□ 1.13
LPCAT3-210ENST00000540090 FGF14Q92915 247 aa22.14■■□□□ 1.13
LPCAT3-210ENST00000540090 SHDQ96IW2 340 aa22.14■■□□□ 1.13
LPCAT3-210ENST00000540090 CLSTN3Q9BQT9 956 aa22.14■■□□□ 1.13
LPCAT3-210ENST00000540090 PAAF1Q9BRP4 392 aa22.14■■□□□ 1.13
LPCAT3-210ENST00000540090 FOXQ1Q9C009 403 aa22.14■■□□□ 1.13
LPCAT3-210ENST00000540090 PDRG1Q9NUG6 133 aa22.14■■□□□ 1.13
LPCAT3-210ENST00000540090 CDH7Q9ULB5 785 aa22.14■■□□□ 1.13
LPCAT3-210ENST00000540090 PCDHA12Q9UN75 941 aa22.14■■□□□ 1.13
LPCAT3-210ENST00000540090 HNRNPA1P09651 372 aaKnown RBP eCLIP22.13■■□□□ 1.13
LPCAT3-210ENST00000540090 RARRES1P49788 294 aa22.13■■□□□ 1.13
LPCAT3-210ENST00000540090 PARM1Q6UWI2 310 aa22.13■■□□□ 1.13
LPCAT3-210ENST00000540090 LNX1Q8TBB1 728 aaPredicted RBP22.13■■□□□ 1.13
LPCAT3-210ENST00000540090 TTPALQ9BTX7 342 aa22.13■■□□□ 1.13
LPCAT3-210ENST00000540090 CACNG4Q9UBN1 327 aa22.13■■□□□ 1.13
LPCAT3-210ENST00000540090 MTCL1Q9Y4B5 1905 aaKnown RBP22.13■■□□□ 1.13
LPCAT3-210ENST00000540090 FRYLO94915 3013 aa22.13■■□□□ 1.13
LPCAT3-210ENST00000540090 TUSC3Q13454 348 aa22.12■■□□□ 1.13
LPCAT3-210ENST00000540090 MAML2Q8IZL2 1156 aaPredicted RBP22.12■■□□□ 1.13
LPCAT3-210ENST00000540090 PIK3R5Q8WYR1 880 aa22.12■■□□□ 1.13
LPCAT3-210ENST00000540090 RUBCNQ92622 972 aa22.12■■□□□ 1.13
LPCAT3-210ENST00000540090 OTOGLQ3ZCN5 2332 aa22.12■■□□□ 1.13
LPCAT3-210ENST00000540090 FAM205CA6NFA0 338 aa22.11■■□□□ 1.13
LPCAT3-210ENST00000540090 POTEMA6NI47 508 aa22.11■■□□□ 1.13
LPCAT3-210ENST00000540090 XRCC6P12956 609 aaKnown RBP eCLIP22.11■■□□□ 1.13
LPCAT3-210ENST00000540090 HOXA9P31269 272 aa22.11■■□□□ 1.13
LPCAT3-210ENST00000540090 NTHL1P78549 312 aa22.11■■□□□ 1.13
LPCAT3-210ENST00000540090 FAM171A1Q5VUB5 890 aa22.11■■□□□ 1.13
LPCAT3-210ENST00000540090 PPP4R3CPQ6ZMV5 832 aa22.11■■□□□ 1.13
LPCAT3-210ENST00000540090 DGLUCYQ7Z3D6 616 aa22.11■■□□□ 1.13
LPCAT3-210ENST00000540090 FGF13Q92913 245 aa22.11■■□□□ 1.13
LPCAT3-210ENST00000540090 PRIMPOLQ96LW4 560 aa22.11■■□□□ 1.13
LPCAT3-210ENST00000540090 DDX23Q9BUQ8 820 aaKnown RBP22.11■■□□□ 1.13
LPCAT3-210ENST00000540090 POLR3FQ9H1D9 316 aaPredicted RBP22.11■■□□□ 1.13
LPCAT3-210ENST00000540090 CACNA1IQ9P0X4 2223 aa22.11■■□□□ 1.13
LPCAT3-210ENST00000540090 KANSL1LA0AUZ9 987 aa22.1■■□□□ 1.13
LPCAT3-210ENST00000540090 LRRN2O75325 713 aa22.1■■□□□ 1.13
LPCAT3-210ENST00000540090 C8AP07357 584 aa22.1■■□□□ 1.13
LPCAT3-210ENST00000540090 NR5A1Q13285 461 aa22.1■■□□□ 1.13
LPCAT3-210ENST00000540090 SNW1Q13573 536 aaKnown RBP22.1■■□□□ 1.13
LPCAT3-210ENST00000540090 PUM1Q14671 1186 aaKnown RBP eCLIP22.1■■□□□ 1.13
LPCAT3-210ENST00000540090 PPM1LQ5SGD2 360 aa22.1■■□□□ 1.13
LPCAT3-210ENST00000540090 LIN9Q5TKA1 542 aa22.1■■□□□ 1.13
LPCAT3-210ENST00000540090 MTSS1LQ765P7 747 aa22.1■■□□□ 1.13
LPCAT3-210ENST00000540090 SUMF1Q8NBK3 374 aa22.1■■□□□ 1.13
LPCAT3-210ENST00000540090 PIGOQ8TEQ8 1089 aa22.1■■□□□ 1.13
LPCAT3-210ENST00000540090 HASPINQ8TF76 798 aa22.1■■□□□ 1.13
LPCAT3-210ENST00000540090 TNFRSF25Q93038 417 aa22.1■■□□□ 1.13
LPCAT3-210ENST00000540090 BORCS6Q96GS4 357 aa22.1■■□□□ 1.13
LPCAT3-210ENST00000540090 FZD8Q9H461 694 aa22.1■■□□□ 1.13
LPCAT3-210ENST00000540090 TTC12Q9H892 705 aaPredicted RBP22.1■■□□□ 1.13
LPCAT3-210ENST00000540090 TDRD15B5MCY1 1934 aaKnown RBP22.1■■□□□ 1.13
LPCAT3-210ENST00000540090 A0A087WWV3 80 aa22.09■■□□□ 1.13
LPCAT3-210ENST00000540090 MED19A0JLT2 244 aaPredicted RBP22.09■■□□□ 1.13
LPCAT3-210ENST00000540090 CASTOR2A6NHX0 329 aa22.09■■□□□ 1.13
LPCAT3-210ENST00000540090 PTGESO14684 152 aa22.09■■□□□ 1.13
LPCAT3-210ENST00000540090 PFKFB2O60825 505 aa22.09■■□□□ 1.13
LPCAT3-210ENST00000540090 DTNBO60941 627 aa22.09■■□□□ 1.13
LPCAT3-210ENST00000540090 KIF4AO95239 1232 aa22.09■■□□□ 1.13
LPCAT3-210ENST00000540090 CTDNEP1O95476 244 aa22.09■■□□□ 1.13
LPCAT3-210ENST00000540090 PRKCQQ04759 706 aa22.09■■□□□ 1.13
LPCAT3-210ENST00000540090 PSMD5Q16401 504 aa22.09■■□□□ 1.13
LPCAT3-210ENST00000540090 CALCRLQ16602 461 aa22.09■■□□□ 1.13
LPCAT3-210ENST00000540090 FAM187BQ17R55 369 aa22.09■■□□□ 1.13
LPCAT3-210ENST00000540090 SLC44A4Q53GD3 710 aa22.09■■□□□ 1.13
LPCAT3-210ENST00000540090 CEP57Q86XR8 500 aa22.09■■□□□ 1.13
LPCAT3-210ENST00000540090 DCLK2Q8N568 766 aa22.09■■□□□ 1.13
LPCAT3-210ENST00000540090 CCDC43Q96MW1 224 aaKnown RBP22.09■■□□□ 1.13
LPCAT3-210ENST00000540090 HINFPQ9BQA5 517 aa22.09■■□□□ 1.13
LPCAT3-210ENST00000540090 PRMT7Q9NVM4 692 aaPredicted RBP22.09■■□□□ 1.13
LPCAT3-210ENST00000540090 LRRIQ4A6NIV6 560 aa22.08■■□□□ 1.13
LPCAT3-210ENST00000540090 CCL16O15467 120 aa22.08■■□□□ 1.13
LPCAT3-210ENST00000540090 ADAM12O43184 909 aa22.08■■□□□ 1.13
LPCAT3-210ENST00000540090 XYLBO75191 536 aa22.08■■□□□ 1.13
LPCAT3-210ENST00000540090 THP07101 528 aa22.08■■□□□ 1.13
LPCAT3-210ENST00000540090 POU2F2P09086 479 aa22.08■■□□□ 1.13
LPCAT3-210ENST00000540090 KRT2P35908 639 aa22.08■■□□□ 1.13
LPCAT3-210ENST00000540090 ELAVL2Q12926 359 aaKnown RBP22.08■■□□□ 1.13
LPCAT3-210ENST00000540090 NAB2Q15742 525 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms