RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 TNNI1P19237 187 aa18.53■□□□□ 0.56
LTBR-207ENST00000539925 KLRC1P26715 233 aa18.53■□□□□ 0.56
LTBR-207ENST00000539925 DRP2Q13474 957 aa18.53■□□□□ 0.56
LTBR-207ENST00000539925 MPZL3Q6UWV2 235 aa18.53■□□□□ 0.56
LTBR-207ENST00000539925 FAM71AQ8IYT1 594 aa18.53■□□□□ 0.56
LTBR-207ENST00000539925 PPM1KQ8N3J5 372 aa18.53■□□□□ 0.56
LTBR-207ENST00000539925 RABGGTAQ92696 567 aa18.53■□□□□ 0.56
LTBR-207ENST00000539925 SYT11Q9BT88 431 aa18.53■□□□□ 0.56
LTBR-207ENST00000539925 TCHPQ9BT92 498 aa18.53■□□□□ 0.56
LTBR-207ENST00000539925 DUSP10Q9Y6W6 482 aa18.53■□□□□ 0.56
LTBR-207ENST00000539925 PASKQ96RG2 1323 aa18.52■□□□□ 0.56
LTBR-207ENST00000539925 CTAGE15A4D2H0 777 aa18.52■□□□□ 0.56
LTBR-207ENST00000539925 FOXN3O00409 490 aaPredicted RBP18.52■□□□□ 0.56
LTBR-207ENST00000539925 CTAGE8P0CG41 777 aa18.52■□□□□ 0.56
LTBR-207ENST00000539925 NAP1L1P55209 391 aaKnown RBP18.52■□□□□ 0.56
LTBR-207ENST00000539925 NLRP11P59045 1033 aaKnown RBP18.52■□□□□ 0.56
LTBR-207ENST00000539925 CHMP4BP1P59074 171 aa18.52■□□□□ 0.56
LTBR-207ENST00000539925 BPIFB4P59827 614 aa18.52■□□□□ 0.56
LTBR-207ENST00000539925 CRELD2Q6UXH1 353 aaPredicted RBP18.52■□□□□ 0.56
LTBR-207ENST00000539925 CTAGE6Q86UF2 777 aa18.52■□□□□ 0.56
LTBR-207ENST00000539925 WDR49Q8IV35 697 aa18.52■□□□□ 0.56
LTBR-207ENST00000539925 CTAGE4Q8IX94 777 aa18.52■□□□□ 0.56
LTBR-207ENST00000539925 LINC01465Q8N7H1 131 aa18.52■□□□□ 0.56
LTBR-207ENST00000539925 RNF14Q9UBS8 474 aa18.52■□□□□ 0.56
LTBR-207ENST00000539925 PCDHGC5Q9Y5F6 944 aa18.52■□□□□ 0.56
LTBR-207ENST00000539925 A6NJR5 290 aa18.51■□□□□ 0.55
LTBR-207ENST00000539925 DDX3XO00571 662 aaKnown RBP eCLIP18.51■□□□□ 0.552e-29■■■■■ 28.3
LTBR-207ENST00000539925 ZEB2O60315 1214 aa18.51■□□□□ 0.55
LTBR-207ENST00000539925 PROZP22891 400 aa18.51■□□□□ 0.55
LTBR-207ENST00000539925 PRPF4BQ13523 1007 aaKnown RBP18.51■□□□□ 0.55
LTBR-207ENST00000539925 ARHGEF19Q8IW93 802 aa18.51■□□□□ 0.55
LTBR-207ENST00000539925 ZNF710Q8N1W2 664 aa18.51■□□□□ 0.55
LTBR-207ENST00000539925 GPR161Q8N6U8 529 aaKnown RBP18.51■□□□□ 0.55
LTBR-207ENST00000539925 TAS1R2Q8TE23 839 aa18.51■□□□□ 0.55
LTBR-207ENST00000539925 USP6NLQ92738 828 aa18.51■□□□□ 0.55
LTBR-207ENST00000539925 APBA2Q99767 749 aa18.51■□□□□ 0.55
LTBR-207ENST00000539925 AGPAT1Q99943 283 aa18.51■□□□□ 0.55
LTBR-207ENST00000539925 TNFSF13BQ9Y275 285 aa18.51■□□□□ 0.55
LTBR-207ENST00000539925 INO80B-WBP1J3KQ70 363 aa18.5■□□□□ 0.55
LTBR-207ENST00000539925 MOCS3O95396 460 aa18.5■□□□□ 0.55
LTBR-207ENST00000539925 C4BPAP04003 597 aaKnown RBP18.5■□□□□ 0.55
LTBR-207ENST00000539925 TBXAS1P24557 533 aaPredicted RBP18.5■□□□□ 0.55
LTBR-207ENST00000539925 ACOT2P49753 483 aa18.5■□□□□ 0.55
LTBR-207ENST00000539925 PPFIA1Q13136 1202 aa18.5■□□□□ 0.55
LTBR-207ENST00000539925 ATF7IP2Q5U623 682 aa18.5■□□□□ 0.55
LTBR-207ENST00000539925 APBB1IPQ7Z5R6 666 aaPredicted RBP18.5■□□□□ 0.55
LTBR-207ENST00000539925 ZNF410Q86VK4 478 aa18.5■□□□□ 0.55
LTBR-207ENST00000539925 PDCL2Q8N4E4 241 aa18.5■□□□□ 0.55
LTBR-207ENST00000539925 HELQQ8TDG4 1101 aa18.5■□□□□ 0.55
LTBR-207ENST00000539925 SEMA4DQ92854 862 aa18.5■□□□□ 0.55
LTBR-207ENST00000539925 NLRP4Q96MN2 994 aa18.5■□□□□ 0.55
LTBR-207ENST00000539925 IMPG2Q9BZV3 1241 aa18.5■□□□□ 0.55
LTBR-207ENST00000539925 INO80BQ9C086 356 aaPredicted RBP18.5■□□□□ 0.55
LTBR-207ENST00000539925 ARGLU1Q9NWB6 273 aaPredicted RBP18.5■□□□□ 0.55
LTBR-207ENST00000539925 SNX12Q9UMY4 172 aa18.5■□□□□ 0.55
LTBR-207ENST00000539925 TFR2Q9UP52 801 aa18.5■□□□□ 0.55
LTBR-207ENST00000539925 HYOU1Q9Y4L1 999 aa18.5■□□□□ 0.55
LTBR-207ENST00000539925 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.5■□□□□ 0.55
LTBR-207ENST00000539925 ALDH1A1P00352 501 aa18.5■□□□□ 0.55
LTBR-207ENST00000539925 ATP1A1P05023 1023 aaKnown RBP18.5■□□□□ 0.55
LTBR-207ENST00000539925 TMEM253P0C7T8 217 aa18.5■□□□□ 0.55
LTBR-207ENST00000539925 PIK3CAP42336 1068 aa18.5■□□□□ 0.55
LTBR-207ENST00000539925 CLCN3P51790 818 aa18.5■□□□□ 0.55
LTBR-207ENST00000539925 PCBP1Q15365 356 aaKnown RBP eCLIP18.5■□□□□ 0.55
LTBR-207ENST00000539925 TMEM63BQ5T3F8 832 aa18.5■□□□□ 0.55
LTBR-207ENST00000539925 MTHFD1LQ6UB35 978 aa18.5■□□□□ 0.55
LTBR-207ENST00000539925 RSRC2Q7L4I2 434 aaKnown RBP18.5■□□□□ 0.55
LTBR-207ENST00000539925 SYCE1Q8N0S2 351 aa18.5■□□□□ 0.55
LTBR-207ENST00000539925 U2AF1L4Q8WU68 220 aaKnown RBP18.5■□□□□ 0.55
LTBR-207ENST00000539925 ZBTB45Q96K62 511 aaPredicted RBP18.5■□□□□ 0.55
LTBR-207ENST00000539925 POP1Q99575 1024 aaKnown RBP18.5■□□□□ 0.55
LTBR-207ENST00000539925 PDE11AQ9HCR9 933 aa18.5■□□□□ 0.55
LTBR-207ENST00000539925 CAPN6Q9Y6Q1 641 aa18.5■□□□□ 0.55
LTBR-207ENST00000539925 IL18RAPO95256 599 aa18.49■□□□□ 0.55
LTBR-207ENST00000539925 GZMAP12544 262 aa18.49■□□□□ 0.55
LTBR-207ENST00000539925 TM4SF4P48230 202 aa18.49■□□□□ 0.55
LTBR-207ENST00000539925 CPT1AP50416 773 aa18.49■□□□□ 0.55
LTBR-207ENST00000539925 MBTD1Q05BQ5 628 aa18.49■□□□□ 0.55
LTBR-207ENST00000539925 BIRC3Q13489 604 aa18.49■□□□□ 0.55
LTBR-207ENST00000539925 ELF2Q15723 593 aa18.49■□□□□ 0.55
LTBR-207ENST00000539925 GRIK4Q16099 956 aa18.49■□□□□ 0.55
LTBR-207ENST00000539925 TMEM132AQ24JP5 1023 aa18.49■□□□□ 0.55
LTBR-207ENST00000539925 GJC2Q5T442 439 aaPredicted RBP18.49■□□□□ 0.55
LTBR-207ENST00000539925 ZNF677Q86XU0 584 aa18.49■□□□□ 0.55
LTBR-207ENST00000539925 CTNNBL1Q8WYA6 563 aaPredicted RBP18.49■□□□□ 0.55
LTBR-207ENST00000539925 HAPLN2Q9GZV7 340 aa18.49■□□□□ 0.55
LTBR-207ENST00000539925 PTPRHQ9HD43 1115 aa18.49■□□□□ 0.55
LTBR-207ENST00000539925 GNEQ9Y223 722 aaKnown RBP18.49■□□□□ 0.55
LTBR-207ENST00000539925 AKT3Q9Y243 479 aa18.49■□□□□ 0.55
LTBR-207ENST00000539925 CNTNAP2Q9UHC6 1331 aa18.49■□□□□ 0.55
LTBR-207ENST00000539925 ANKRD62A6NC57 917 aa18.48■□□□□ 0.55
LTBR-207ENST00000539925 LRRN2O75325 713 aa18.48■□□□□ 0.55
LTBR-207ENST00000539925 HLA-DRAP01903 254 aa18.48■□□□□ 0.55
LTBR-207ENST00000539925 MCF2P10911 925 aa18.48■□□□□ 0.55
LTBR-207ENST00000539925 PDE6CP51160 858 aa18.48■□□□□ 0.55
LTBR-207ENST00000539925 ITIH3Q06033 890 aa18.48■□□□□ 0.55
LTBR-207ENST00000539925 ERCC6LQ2NKX8 1250 aa18.48■□□□□ 0.55
LTBR-207ENST00000539925 PPP1R2P3Q6NXS1 205 aa18.48■□□□□ 0.55
LTBR-207ENST00000539925 GLYCTKQ8IVS8 523 aa18.48■□□□□ 0.55
LTBR-207ENST00000539925 TRAPPC12Q8WVT3 735 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms