RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 TMEM62Q0P6H9 643 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 AP1B1Q10567 949 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 RAPGEF1Q13905 1077 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 LIN52Q52LA3 116 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 UBAP2Q5T6F2 1119 aaKnown RBP12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 NT5DC3Q86UY8 548 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 CDAN1Q8IWY9 1227 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 SRBD1Q8N5C6 995 aaKnown RBP12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 PPP1R14BQ96C90 147 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 CENPKQ9BS16 269 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 LSM14BQ9BX40 385 aaKnown RBP12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 PHACTR1Q9C0D0 580 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 DHX36Q9H2U1 1008 aaKnown RBP12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 DDX43Q9NXZ2 648 aaKnown RBP12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 ZNF70Q9UC06 446 aaPredicted RBP12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 MTRF1LQ9UGC7 380 aaKnown RBP12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 INTUQ9ULD6 942 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 DIS3Q9Y2L1 958 aaKnown RBP12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 SNX24Q9Y343 169 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 NR2E1Q9Y466 385 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 GJA3Q9Y6H8 435 aa12.14□□□□□ -0.47
SEMA4D-221ENST00000537934 LYNP07948 512 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 CALM1P0DP23 149 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 CALM2P0DP24 149 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 CALM3P0DP25 149 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 RARGP13631 454 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 PLCG1P19174 1290 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 ARID5AQ03989 594 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 SLC34A1Q06495 639 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 SPDYAQ5MJ70 313 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 LRRC74BQ6ZQY2 392 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 C4orf50Q6ZRC1 276 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 LRRC55Q6ZSA7 311 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 TMTC3Q6ZXV5 915 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 ANKRD42Q8N9B4 389 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 FAM133AQ8N9E0 248 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 PPFIBP2Q8ND30 876 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 GDAP1Q8TB36 358 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 YIPF2Q9BWQ6 316 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 PITPNM3Q9BZ71 974 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 MAF1Q9H063 256 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 PRDM16Q9HAZ2 1276 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 GRHL1Q9NZI5 618 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 PI4KBQ9UBF8 816 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 PARP2Q9UGN5 583 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 RASAL2Q9UJF2 1139 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 CHKBQ9Y259 395 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 USH1CQ9Y6N9 552 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 ATP8B3O60423 1300 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 ZNF541Q9H0D2 1346 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 POTEFA5A3E0 1075 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 WNT10BO00744 389 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 DCTN3O75935 186 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 ASLP04424 464 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 POTEIP0CG38 1075 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 POTEJP0CG39 1038 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 STX2P32856 288 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 RBM26Q5T8P6 1007 aaKnown RBP12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 POTEEQ6S8J3 1075 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 JAMLQ86YT9 394 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 HPS3Q969F9 1004 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 RUNDC3BQ96NL0 473 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 SERPINB12Q96P63 405 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 RMI1Q9H9A7 625 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 METTL14Q9HCE5 456 aaKnown RBP12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 KCNK9Q9NPC2 374 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 IL1RAPL1Q9NZN1 696 aa12.13□□□□□ -0.47
SEMA4D-221ENST00000537934 A0A0A6YYK5 440 aaPredicted RBP12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 TMEM221A6NGB7 291 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 GOLGA8HP0CJ92 632 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 CREB1P16220 341 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 FGFR4P22455 802 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 PTPN4P29074 926 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 NT5C2P49902 561 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 NPEPPSP55786 919 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 MAPK7Q13164 816 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 MPP3Q13368 585 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 TNIP1Q15025 636 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 RCN1Q15293 331 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 SPDYE2Q495Y8 402 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 OTUD6AQ7L8S5 288 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 RNF168Q8IYW5 571 aaPredicted RBP12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 LRRC47Q8N1G4 583 aaKnown RBP12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 GLG1Q92896 1179 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 CSRNP1Q96S65 589 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 MLXIPLQ9NP71 852 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 MYOZ2Q9NPC6 264 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 RHBDL2Q9NX52 303 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 MTMR4Q9NYA4 1195 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 TMOD2Q9NZR1 351 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 TBC1D30Q9Y2I9 924 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 STARD13Q9Y3M8 1113 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 CNTNAP5Q8WYK1 1306 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 FZD9O00144 591 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 MAP3K7O43318 606 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 HNRNPRO43390 633 aaKnown RBP12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 ENTPD3O75355 529 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 NPM3O75607 178 aaKnown RBP12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 ARHGEF18Q6ZSZ5 1173 aa12.12□□□□□ -0.47
SEMA4D-221ENST00000537934 NELFCDQ8IXH7 590 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms