RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.23□□□□□ -1.41
CHD4-206ENST00000536999 CCDC105Q8IYK2 499 aa6.23□□□□□ -1.41
CHD4-206ENST00000536999 TDHQ8IZJ6 230 aa6.23□□□□□ -1.41
CHD4-206ENST00000536999 ANKRD13CQ8N6S4 541 aa6.23□□□□□ -1.41
CHD4-206ENST00000536999 SYT2Q8N9I0 419 aaPredicted RBP6.23□□□□□ -1.41
CHD4-206ENST00000536999 MICAL1Q8TDZ2 1067 aa6.23□□□□□ -1.41
CHD4-206ENST00000536999 CKAP2Q8WWK9 683 aa6.23□□□□□ -1.41
CHD4-206ENST00000536999 RNF25Q96BH1 459 aaPredicted RBP6.23□□□□□ -1.41
CHD4-206ENST00000536999 PPP1R14BQ96C90 147 aa6.23□□□□□ -1.41
CHD4-206ENST00000536999 DNAJC19Q96DA6 116 aa6.23□□□□□ -1.41
CHD4-206ENST00000536999 STAMBPL1Q96FJ0 436 aa6.23□□□□□ -1.41
CHD4-206ENST00000536999 NAF1Q96HR8 494 aaKnown RBP6.23□□□□□ -1.41
CHD4-206ENST00000536999 CFAP57Q96MR6 1250 aa6.23□□□□□ -1.41
CHD4-206ENST00000536999 DCBLD2Q96PD2 775 aa6.23□□□□□ -1.41
CHD4-206ENST00000536999 LRRC37BQ96QE4 947 aa6.23□□□□□ -1.41
CHD4-206ENST00000536999 EYA3Q99504 573 aa6.23□□□□□ -1.41
CHD4-206ENST00000536999 TSC22D3Q99576 134 aa6.23□□□□□ -1.41
CHD4-206ENST00000536999 ELAC2Q9BQ52 826 aaKnown RBP6.23□□□□□ -1.41
CHD4-206ENST00000536999 TMEM47Q9BQJ4 181 aa6.23□□□□□ -1.41
CHD4-206ENST00000536999 MMTAG2Q9BU76 263 aaKnown RBP6.23□□□□□ -1.41
CHD4-206ENST00000536999 TRAIPQ9BWF2 469 aa6.23□□□□□ -1.41
CHD4-206ENST00000536999 FRMD8P1Q9BZ68 369 aaPredicted RBP6.23□□□□□ -1.41
CHD4-206ENST00000536999 DDX47Q9H0S4 455 aaKnown RBP6.23□□□□□ -1.41
CHD4-206ENST00000536999 KCTD10Q9H3F6 313 aa6.23□□□□□ -1.41
CHD4-206ENST00000536999 LRRC19Q9H756 370 aa6.23□□□□□ -1.41
CHD4-206ENST00000536999 TMEM206Q9H813 350 aa6.23□□□□□ -1.41
CHD4-206ENST00000536999 ECT2Q9H8V3 914 aa6.23□□□□□ -1.41
CHD4-206ENST00000536999 DBNDD1Q9H9R9 158 aa6.23□□□□□ -1.41
CHD4-206ENST00000536999 TBC1D7Q9P0N9 293 aa6.23□□□□□ -1.41
CHD4-206ENST00000536999 ZFATQ9P243 1243 aa6.23□□□□□ -1.41
CHD4-206ENST00000536999 SCAF8Q9UPN6 1271 aaKnown RBP6.23□□□□□ -1.41
CHD4-206ENST00000536999 USP20Q9Y2K6 914 aa6.23□□□□□ -1.41
CHD4-206ENST00000536999 HCN4Q9Y3Q4 1203 aa6.23□□□□□ -1.41
CHD4-206ENST00000536999 ZHX2Q9Y6X8 837 aa6.23□□□□□ -1.41
CHD4-206ENST00000536999 MYH8P13535 1937 aa6.23□□□□□ -1.41
CHD4-206ENST00000536999 COL1A1P02452 1464 aaPredicted RBP6.22□□□□□ -1.41
CHD4-206ENST00000536999 ESYT3A0FGR9 886 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 CCDC189A1A4V9 331 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 ANKRD33BA6NCL7 494 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 SPDYE3A6NKU9 549 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 PHF20L1A8MW92 1017 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 PDLIM1O00151 329 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 KIAA0391O15091 583 aaKnown RBP6.22□□□□□ -1.41
CHD4-206ENST00000536999 TTI1O43156 1089 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 RIPK2O43353 540 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 TLR2O60603 784 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 CCDC22O60826 627 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 CAND2O75155 1236 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 SMIM24O75264 130 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 SNUPNO95149 360 aaKnown RBP6.22□□□□□ -1.41
CHD4-206ENST00000536999 TFRCP02786 760 aaKnown RBP6.22□□□□□ -1.41
CHD4-206ENST00000536999 ATP6V1C1P21283 382 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 TMOD1P28289 359 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 GJA8P48165 433 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 GCLCP48506 637 aaPredicted RBP6.22□□□□□ -1.41
CHD4-206ENST00000536999 KLK7P49862 253 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 PAPOLAP51003 745 aaKnown RBP6.22□□□□□ -1.41
CHD4-206ENST00000536999 GALCP54803 685 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 JAM2P57087 298 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 RPL26P61254 145 aaKnown RBP6.22□□□□□ -1.41
CHD4-206ENST00000536999 CAP1Q01518 475 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 PPATQ06203 517 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 SPARCL1Q14515 664 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 MTFR1Q15390 333 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 TAF11Q15544 211 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 TBCCQ15814 346 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 CNGA2Q16280 664 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 HLFQ16534 295 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 SUSD4Q5VX71 490 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 NUGGCQ68CJ6 796 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 KRT39Q6A163 491 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 CCDC137Q6PK04 289 aaKnown RBP6.22□□□□□ -1.41
CHD4-206ENST00000536999 C16orf86Q6ZW13 317 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 ASRGL1Q7L266 308 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 DYMQ7RTS9 669 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 ZNF571Q7Z3V5 609 aaPredicted RBP6.22□□□□□ -1.41
CHD4-206ENST00000536999 TMC4Q7Z404 712 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 UBE2Q1Q7Z7E8 422 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 TBC1D1Q86TI0 1168 aaPredicted RBP6.22□□□□□ -1.41
CHD4-206ENST00000536999 GPBP1Q86WP2 473 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 ENDOVQ8N8Q3 282 aaKnown RBP6.22□□□□□ -1.41
CHD4-206ENST00000536999 RBBP8NLQ8NC74 664 aaPredicted RBP6.22□□□□□ -1.41
CHD4-206ENST00000536999 HELBQ8NG08 1087 aaPredicted RBP6.22□□□□□ -1.41
CHD4-206ENST00000536999 ATL2Q8NHH9 583 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 SLC35G2Q8TBE7 412 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 PIGOQ8TEQ8 1089 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 ARHGEF2Q92974 986 aaKnown RBP6.22□□□□□ -1.41
CHD4-206ENST00000536999 ART4Q93070 314 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 CEP95Q96GE4 821 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 SNF8Q96H20 258 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 FAXDC2Q96IV6 333 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 MAML3Q96JK9 1138 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 FAM84BQ96KN1 310 aaPredicted RBP6.22□□□□□ -1.41
CHD4-206ENST00000536999 PNMA5Q96PV4 448 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 NR1H4Q96RI1 486 aaPredicted RBP6.22□□□□□ -1.41
CHD4-206ENST00000536999 GDF15Q99988 308 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 POLR3CQ9BUI4 534 aaPredicted RBP6.22□□□□□ -1.41
CHD4-206ENST00000536999 EHD4Q9H223 541 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 LRMDAQ9H2I8 198 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 FAM96AQ9H5X1 160 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms