RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 COL9A2Q14055 689 aaPredicted RBP11.16□□□□□ -0.62
CLSTN3-203ENST00000534830 GIT2Q14161 759 aa11.16□□□□□ -0.62
CLSTN3-203ENST00000534830 TFDP1Q14186 410 aa11.16□□□□□ -0.62
CLSTN3-203ENST00000534830 ECM1Q16610 540 aa11.16□□□□□ -0.62
CLSTN3-203ENST00000534830 FAM187BQ17R55 369 aa11.16□□□□□ -0.62
CLSTN3-203ENST00000534830 CDCA2Q69YH5 1023 aaPredicted RBP11.16□□□□□ -0.62
CLSTN3-203ENST00000534830 NOTUMQ6P988 496 aa11.16□□□□□ -0.62
CLSTN3-203ENST00000534830 NOSTRINQ8IVI9 506 aa11.16□□□□□ -0.62
CLSTN3-203ENST00000534830 COLGALT2Q8IYK4 626 aa11.16□□□□□ -0.62
CLSTN3-203ENST00000534830 RNF168Q8IYW5 571 aaPredicted RBP11.16□□□□□ -0.62
CLSTN3-203ENST00000534830 GPR161Q8N6U8 529 aaKnown RBP11.16□□□□□ -0.62
CLSTN3-203ENST00000534830 GSTCDQ8NEC7 633 aa11.16□□□□□ -0.62
CLSTN3-203ENST00000534830 SECISBP2LQ93073 1101 aaKnown RBP11.16□□□□□ -0.62
CLSTN3-203ENST00000534830 NACC1Q96RE7 527 aa11.16□□□□□ -0.62
CLSTN3-203ENST00000534830 POLR3FQ9H1D9 316 aaPredicted RBP11.16□□□□□ -0.62
CLSTN3-203ENST00000534830 INPP5FQ9Y2H2 1132 aa11.16□□□□□ -0.62
CLSTN3-203ENST00000534830 PRR5-ARHGAP8B1AHC4 643 aa11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 INO80B-WBP1J3KQ70 363 aa11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 NRP1O14786 923 aa11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 USO1O60763 962 aaKnown RBP11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 ALDH2P05091 517 aa11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 ADRB1P08588 477 aa11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 SRFP11831 508 aa11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 ITGA4P13612 1032 aa11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 GBP2P32456 591 aaPredicted RBP11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 FXR2P51116 673 aaKnown RBP eCLIP11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 ARHGAP8P85298 464 aa11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 LMNB2Q03252 620 aa11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 RNASELQ05823 741 aaKnown RBP11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 PTPN14Q15678 1187 aa11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 TTC38Q5R3I4 469 aa11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 POTEGQ6S5H5 508 aa11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 PPP4R3CPQ6ZMV5 832 aa11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 PPFIBP1Q86W92 1011 aa11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 MCPH1Q8NEM0 835 aa11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 URGCPQ8TCY9 931 aa11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 RTKNQ9BST9 563 aa11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 FZD8Q9H461 694 aa11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 GPRC5CQ9NQ84 441 aa11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 MARCH5Q9NX47 278 aa11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 DLGAP2Q9P1A6 1054 aa11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 STK39Q9UEW8 545 aa11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 USP18Q9UMW8 372 aa11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 GIT1Q9Y2X7 761 aa11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 HES2Q9Y543 173 aa11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 ATRXP46100 2492 aa11.15□□□□□ -0.62
CLSTN3-203ENST00000534830 ZMYM2Q9UBW7 1377 aa11.15□□□□□ -0.63
CLSTN3-203ENST00000534830 USP24Q9UPU5 2620 aa11.14□□□□□ -0.63
CLSTN3-203ENST00000534830 ARL5CA6NH57 179 aa11.14□□□□□ -0.63
CLSTN3-203ENST00000534830 B4GALT5O43286 388 aa11.14□□□□□ -0.63
CLSTN3-203ENST00000534830 N4BP1O75113 896 aaKnown RBP11.14□□□□□ -0.63
CLSTN3-203ENST00000534830 POMCP01189 267 aa11.14□□□□□ -0.63
CLSTN3-203ENST00000534830 CYP11B2P19099 503 aa11.14□□□□□ -0.63
CLSTN3-203ENST00000534830 PDIA5Q14554 519 aa11.14□□□□□ -0.63
CLSTN3-203ENST00000534830 NBR1Q14596 966 aa11.14□□□□□ -0.63
CLSTN3-203ENST00000534830 PHLDB3Q6NSJ2 640 aa11.14□□□□□ -0.63
CLSTN3-203ENST00000534830 SLC44A3Q8N4M1 653 aa11.14□□□□□ -0.63
CLSTN3-203ENST00000534830 IGSF22Q8N9C0 903 aa11.14□□□□□ -0.63
CLSTN3-203ENST00000534830 GPR152Q8TDT2 470 aa11.14□□□□□ -0.63
CLSTN3-203ENST00000534830 ATRIPQ8WXE1 791 aa11.14□□□□□ -0.63
CLSTN3-203ENST00000534830 BSNDQ8WZ55 320 aa11.14□□□□□ -0.63
CLSTN3-203ENST00000534830 PRIMPOLQ96LW4 560 aa11.14□□□□□ -0.63
CLSTN3-203ENST00000534830 GAD1Q99259 594 aa11.14□□□□□ -0.63
CLSTN3-203ENST00000534830 FOXQ1Q9C009 403 aa11.14□□□□□ -0.63
CLSTN3-203ENST00000534830 GBP3Q9H0R5 595 aa11.14□□□□□ -0.63
CLSTN3-203ENST00000534830 ARHGEF3Q9NR81 526 aa11.14□□□□□ -0.63
CLSTN3-203ENST00000534830 FAN1Q9Y2M0 1017 aa11.14□□□□□ -0.63
CLSTN3-203ENST00000534830 TTLL13PA6NNM8 815 aa11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 SPTLC1O15269 473 aa11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 LRRN2O75325 713 aa11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 PAPLNO95428 1278 aa11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 SOD2P04179 222 aa11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 GLULP15104 373 aa11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 KLRC2P26717 231 aa11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 MLH1P40692 756 aa11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 CLCN4P51793 760 aa11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 NCBP1Q09161 790 aaKnown RBP11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 RABEP1Q15276 862 aa11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 IL17AQ16552 155 aa11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 SLC27A1Q6PCB7 646 aa11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 DCLRE1AQ6PJP8 1040 aa11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 PADI6Q6TGC4 694 aa11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 MAEAQ7L5Y9 396 aa11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 TAS1R1Q7RTX1 841 aa11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 MAML2Q8IZL2 1156 aaPredicted RBP11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 FAM184AQ8NB25 1140 aa11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 PJA1Q8NG27 643 aa11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 ERMNQ8TAM6 284 aa11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 COL26A1Q96A83 441 aa11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 ZFP42Q96MM3 310 aa11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 KLHL5Q96PQ7 755 aa11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 FAM193BQ96PV7 902 aaPredicted RBP11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 CCDC113Q9H0I3 377 aa11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 NXF3Q9H4D5 531 aaKnown RBP11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 PRMT7Q9NVM4 692 aaPredicted RBP11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 SPATA6Q9NWH7 488 aaPredicted RBP11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 PCDHB6Q9Y5E3 794 aa11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 MYH11P35749 1972 aa11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 MIA3Q5JRA6 1907 aa11.13□□□□□ -0.63
CLSTN3-203ENST00000534830 LRRIQ4A6NIV6 560 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms