RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 STRN3Q13033 797 aa18.93■□□□□ 0.62
PHRF1-204ENST00000532550 TUSC3Q13454 348 aa18.93■□□□□ 0.62
PHRF1-204ENST00000532550 DHX8Q14562 1220 aaKnown RBP18.93■□□□□ 0.62
PHRF1-204ENST00000532550 CBX2Q14781 532 aaPredicted RBP18.93■□□□□ 0.62
PHRF1-204ENST00000532550 HERC2P3Q9BVR0 1158 aa18.93■□□□□ 0.62
PHRF1-204ENST00000532550 DZANK1Q9NVP4 752 aa18.93■□□□□ 0.62
PHRF1-204ENST00000532550 CNPP09543 421 aaKnown RBP18.92■□□□□ 0.62
PHRF1-204ENST00000532550 EPCAMP16422 314 aa18.92■□□□□ 0.62
PHRF1-204ENST00000532550 GLUD2P49448 558 aa18.92■□□□□ 0.62
PHRF1-204ENST00000532550 GRIN1Q05586 938 aa18.92■□□□□ 0.62
PHRF1-204ENST00000532550 RESTQ13127 1097 aa18.92■□□□□ 0.62
PHRF1-204ENST00000532550 HSP90AA2PQ14568 343 aaPredicted RBP18.92■□□□□ 0.62
PHRF1-204ENST00000532550 KARSQ15046 597 aaKnown RBP18.92■□□□□ 0.62
PHRF1-204ENST00000532550 TMEM31Q5JXX7 168 aa18.92■□□□□ 0.62
PHRF1-204ENST00000532550 SLC22A17Q8WUG5 538 aa18.92■□□□□ 0.62
PHRF1-204ENST00000532550 RABGGTAQ92696 567 aa18.92■□□□□ 0.62
PHRF1-204ENST00000532550 SNX21Q969T3 373 aa18.92■□□□□ 0.62
PHRF1-204ENST00000532550 RPGRIP1Q96KN7 1286 aa18.92■□□□□ 0.62
PHRF1-204ENST00000532550 TARS2Q9BW92 718 aaKnown RBP18.92■□□□□ 0.62
PHRF1-204ENST00000532550 ADAM7Q9H2U9 754 aa18.92■□□□□ 0.62
PHRF1-204ENST00000532550 LARSQ9P2J5 1176 aaKnown RBP18.92■□□□□ 0.62
PHRF1-204ENST00000532550 ADAM28Q9UKQ2 775 aa18.92■□□□□ 0.62
PHRF1-204ENST00000532550 NPHP3-ACAD11A0A0J9YXS1 232 aa18.91■□□□□ 0.62
PHRF1-204ENST00000532550 SPDYE4A6NLX3 237 aa18.91■□□□□ 0.62
PHRF1-204ENST00000532550 F8W810 466 aa18.91■□□□□ 0.62
PHRF1-204ENST00000532550 PTGESO14684 152 aa18.91■□□□□ 0.62
PHRF1-204ENST00000532550 DCXO43602 365 aa18.91■□□□□ 0.62
PHRF1-204ENST00000532550 STX6O43752 255 aa18.91■□□□□ 0.62
PHRF1-204ENST00000532550 MARCKSP29966 332 aaPredicted RBP18.91■□□□□ 0.62
PHRF1-204ENST00000532550 YARSP54577 528 aaKnown RBP18.91■□□□□ 0.62
PHRF1-204ENST00000532550 CEBPZQ03701 1054 aaKnown RBP18.91■□□□□ 0.62
PHRF1-204ENST00000532550 USP41Q3LFD5 358 aa18.91■□□□□ 0.62
PHRF1-204ENST00000532550 ZNF568Q3ZCX4 644 aa18.91■□□□□ 0.62
PHRF1-204ENST00000532550 ARSHQ5FYA8 562 aa18.91■□□□□ 0.62
PHRF1-204ENST00000532550 KIAA0319Q5VV43 1072 aa18.91■□□□□ 0.62
PHRF1-204ENST00000532550 FUT10Q6P4F1 479 aa18.91■□□□□ 0.62
PHRF1-204ENST00000532550 FAM173BQ6P4H8 233 aa18.91■□□□□ 0.62
PHRF1-204ENST00000532550 TAS1R3Q7RTX0 852 aa18.91■□□□□ 0.62
PHRF1-204ENST00000532550 ZBTB33Q86T24 672 aa18.91■□□□□ 0.62
PHRF1-204ENST00000532550 GPBP1Q86WP2 473 aa18.91■□□□□ 0.62
PHRF1-204ENST00000532550 RNF135Q8IUD6 432 aa18.91■□□□□ 0.62
PHRF1-204ENST00000532550 CCDC94Q9BW85 323 aaPredicted RBP18.91■□□□□ 0.62
PHRF1-204ENST00000532550 ZSCAN16Q9H4T2 348 aaPredicted RBP18.91■□□□□ 0.62
PHRF1-204ENST00000532550 PTPRHQ9HD43 1115 aa18.91■□□□□ 0.62
PHRF1-204ENST00000532550 MTMR6Q9Y217 621 aa18.91■□□□□ 0.62
PHRF1-204ENST00000532550 CASTOR2A6NHX0 329 aa18.9■□□□□ 0.62
PHRF1-204ENST00000532550 LOC730098B7Z3J9 87 aa18.9■□□□□ 0.62
PHRF1-204ENST00000532550 H0YCG3 227 aa18.9■□□□□ 0.62
PHRF1-204ENST00000532550 GPR37L1O60883 481 aa18.9■□□□□ 0.62
PHRF1-204ENST00000532550 EFEMP2O95967 443 aa18.9■□□□□ 0.62
PHRF1-204ENST00000532550 KRT18P05783 430 aaKnown RBP18.9■□□□□ 0.62
PHRF1-204ENST00000532550 ADH1AP07327 375 aa18.9■□□□□ 0.62
PHRF1-204ENST00000532550 PLCG1P19174 1290 aa18.9■□□□□ 0.62
PHRF1-204ENST00000532550 CLCN4P51793 760 aa18.9■□□□□ 0.62
PHRF1-204ENST00000532550 DSG1Q02413 1049 aa18.9■□□□□ 0.62
PHRF1-204ENST00000532550 CACNB1Q02641 598 aaPredicted RBP18.9■□□□□ 0.62
PHRF1-204ENST00000532550 PTPAQ15257 358 aa18.9■□□□□ 0.62
PHRF1-204ENST00000532550 ATAT1Q5SQI0 421 aa18.9■□□□□ 0.62
PHRF1-204ENST00000532550 RARS2Q5T160 578 aaKnown RBP18.9■□□□□ 0.62
PHRF1-204ENST00000532550 RNF168Q8IYW5 571 aaPredicted RBP18.9■□□□□ 0.62
PHRF1-204ENST00000532550 C12orf76Q8N812 135 aaPredicted RBP18.9■□□□□ 0.62
PHRF1-204ENST00000532550 TMEM161BQ8NDZ6 487 aa18.9■□□□□ 0.62
PHRF1-204ENST00000532550 RAD54LQ92698 747 aa18.9■□□□□ 0.62
PHRF1-204ENST00000532550 FBXL18Q96ME1 805 aa18.9■□□□□ 0.62
PHRF1-204ENST00000532550 RIPOR3Q96MK2 946 aa18.9■□□□□ 0.62
PHRF1-204ENST00000532550 NECTIN4Q96NY8 510 aa18.9■□□□□ 0.62
PHRF1-204ENST00000532550 PAAF1Q9BRP4 392 aa18.9■□□□□ 0.62
PHRF1-204ENST00000532550 GPR62Q9BZJ7 368 aa18.9■□□□□ 0.62
PHRF1-204ENST00000532550 CCSER1Q9C0I3 900 aa18.9■□□□□ 0.62
PHRF1-204ENST00000532550 CDT1Q9H211 546 aa18.9■□□□□ 0.62
PHRF1-204ENST00000532550 CXCL16Q9H2A7 254 aa18.9■□□□□ 0.62
PHRF1-204ENST00000532550 TOPORSQ9NS56 1045 aaPredicted RBP18.9■□□□□ 0.62
PHRF1-204ENST00000532550 CHST7Q9NS84 486 aa18.9■□□□□ 0.62
PHRF1-204ENST00000532550 CCDC39Q9UFE4 941 aa18.9■□□□□ 0.62
PHRF1-204ENST00000532550 ODF2LQ9ULJ1 636 aa18.9■□□□□ 0.62
PHRF1-204ENST00000532550 SRPRBQ9Y5M8 271 aaKnown RBP18.9■□□□□ 0.62
PHRF1-204ENST00000532550 TRIP11Q15643 1979 aa18.9■□□□□ 0.62
PHRF1-204ENST00000532550 MCF2P10911 925 aa18.89■□□□□ 0.61
PHRF1-204ENST00000532550 DDIT3P35638 169 aa18.89■□□□□ 0.61
PHRF1-204ENST00000532550 GRM5P41594 1212 aa18.89■□□□□ 0.61
PHRF1-204ENST00000532550 MTHFRP42898 656 aa18.89■□□□□ 0.61
PHRF1-204ENST00000532550 OSTNP61366 133 aa18.89■□□□□ 0.61
PHRF1-204ENST00000532550 MCM6Q14566 821 aa18.89■□□□□ 0.61
PHRF1-204ENST00000532550 SPECC1Q5M775 1068 aa18.89■□□□□ 0.61
PHRF1-204ENST00000532550 MPZL3Q6UWV2 235 aa18.89■□□□□ 0.61
PHRF1-204ENST00000532550 MYCT1Q8N699 235 aa18.89■□□□□ 0.61
PHRF1-204ENST00000532550 EPSTI1Q96J88 318 aa18.89■□□□□ 0.61
PHRF1-204ENST00000532550 ACAP3Q96P50 834 aa18.89■□□□□ 0.61
PHRF1-204ENST00000532550 REEP2Q9BRK0 252 aa18.89■□□□□ 0.61
PHRF1-204ENST00000532550 LRFN3Q9BTN0 628 aa18.89■□□□□ 0.61
PHRF1-204ENST00000532550 RXFP1Q9HBX9 757 aa18.89■□□□□ 0.61
PHRF1-204ENST00000532550 BLOC1S4Q9NUP1 217 aa18.89■□□□□ 0.61
PHRF1-204ENST00000532550 CACNG4Q9UBN1 327 aa18.89■□□□□ 0.61
PHRF1-204ENST00000532550 DPP7Q9UHL4 492 aa18.89■□□□□ 0.61
PHRF1-204ENST00000532550 TEX28O15482 410 aa18.88■□□□□ 0.61
PHRF1-204ENST00000532550 FAM13AO94988 1023 aa18.88■□□□□ 0.61
PHRF1-204ENST00000532550 HSP90AA1P07900 732 aaKnown RBP18.88■□□□□ 0.61
PHRF1-204ENST00000532550 MAPTP10636 758 aaKnown RBP18.88■□□□□ 0.61
PHRF1-204ENST00000532550 COL9A1P20849 921 aa18.88■□□□□ 0.61
PHRF1-204ENST00000532550 TXLNAP40222 546 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms