RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 EPC1Q9H2F5 836 aa10□□□□□ -0.81
USF1-210ENST00000531842 SLKQ9H2G2 1235 aaPredicted RBP10□□□□□ -0.81
USF1-210ENST00000531842 PLEKHA4Q9H4M7 779 aa10□□□□□ -0.81
USF1-210ENST00000531842 GJB4Q9NTQ9 266 aa10□□□□□ -0.81
USF1-210ENST00000531842 ZDHHC7Q9NXF8 308 aa10□□□□□ -0.81
USF1-210ENST00000531842 DNMT3BQ9UBC3 853 aaKnown RBP10□□□□□ -0.81
USF1-210ENST00000531842 FBXW11Q9UKB1 542 aa10□□□□□ -0.81
USF1-210ENST00000531842 ADAM28Q9UKQ2 775 aa10□□□□□ -0.81
USF1-210ENST00000531842 ATRXP46100 2492 aa10□□□□□ -0.81
USF1-210ENST00000531842 LAMA1P25391 3075 aa10□□□□□ -0.81
USF1-210ENST00000531842 ZZEF1O43149 2961 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 SPAG17Q6Q759 2223 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 EML5Q05BV3 1969 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 FAM205CA6NFA0 338 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 I3L4J1 428 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 INO80B-WBP1J3KQ70 363 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 SPTLC1O15269 473 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 ERLIN2O94905 339 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 CEBPBP17676 345 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 USP11P51784 963 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 CDC42EP1Q00587 391 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 CYP4A11Q02928 519 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 MBTD1Q05BQ5 628 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 CAPSQ13938 189 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 ZNF528Q3MIS6 628 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 PPM1JQ5JR12 505 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 PPM1LQ5SGD2 360 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 FAM171A1Q5VUB5 890 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 TANGO2Q6ICL3 276 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 CYP26C1Q6V0L0 522 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 TEX2Q8IWB9 1127 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 LNX1Q8TBB1 728 aaPredicted RBP9.99□□□□□ -0.81
USF1-210ENST00000531842 CCDC12Q8WUD4 166 aaPredicted RBP9.99□□□□□ -0.81
USF1-210ENST00000531842 SLC7A3Q8WY07 619 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 NELL1Q92832 810 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 DYDC2Q96IM9 177 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 SHDQ96IW2 340 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 JAKMIP1Q96N16 626 aaKnown RBP9.99□□□□□ -0.81
USF1-210ENST00000531842 LXNQ9BS40 222 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 PHF20Q9BVI0 1012 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 COLEC11Q9BWP8 271 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 RHOBTB2Q9BYZ6 727 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 CSRNP2Q9H175 543 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 ZSCAN32Q9NX65 697 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 FNIP2Q9P278 1114 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 PARP2Q9UGN5 583 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 DDX25Q9UHL0 483 aaKnown RBP9.99□□□□□ -0.81
USF1-210ENST00000531842 FBXO4Q9UKT5 387 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 KCNJ14Q9UNX9 436 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 IGF2RP11717 2491 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 NCANO14594 1321 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 AKAP13Q12802 2813 aa9.99□□□□□ -0.81
USF1-210ENST00000531842 CYP3A7-CYP3A51PA0A087WV96 503 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.98□□□□□ -0.81
USF1-210ENST00000531842 M0R2N6 131 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 TADA2AO75478 443 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 EDN1P05305 212 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 ADRB1P08588 477 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 TDGF1P13385 188 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 CYP3A7P24462 503 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 QARSP47897 775 aaKnown RBP9.98□□□□□ -0.81
USF1-210ENST00000531842 PTENP60484 403 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 HSP90AA2PQ14568 343 aaPredicted RBP9.98□□□□□ -0.81
USF1-210ENST00000531842 CCDC6Q16204 474 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 PSMD5Q16401 504 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 XKR9Q5GH70 373 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 ZBTB41Q5SVQ8 909 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 AXDND1Q5T1B0 1012 aaPredicted RBP9.98□□□□□ -0.81
USF1-210ENST00000531842 NCAPH2Q6IBW4 605 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 PRR23BQ6ZRT6 265 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 GPIHBP1Q8IV16 184 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 TMEM130Q8N3G9 435 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 RDM1Q8NG50 284 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 BICD2Q8TD16 824 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 HDAC7Q8WUI4 952 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 HAS1Q92839 578 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 TCEAL4Q96EI5 215 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 CHAMP1Q96JM3 812 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 C2orf42Q9NWW7 574 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 PCDHA4Q9UN74 947 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 SSX2IPQ9Y2D8 614 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 PCDHGA2Q9Y5H1 932 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 NID2Q14112 1375 aa9.98□□□□□ -0.81
USF1-210ENST00000531842 GREB1Q4ZG55 1949 aa9.97□□□□□ -0.81
USF1-210ENST00000531842 SPEGQ15772 3267 aa9.97□□□□□ -0.81
USF1-210ENST00000531842 CARNS1A5YM72 827 aa9.97□□□□□ -0.81
USF1-210ENST00000531842 PTGESO14684 152 aa9.97□□□□□ -0.81
USF1-210ENST00000531842 HOXB3P14651 431 aaPredicted RBP9.97□□□□□ -0.81
USF1-210ENST00000531842 FCARP24071 287 aa9.97□□□□□ -0.81
USF1-210ENST00000531842 PDIA3P30101 505 aaKnown RBP9.97□□□□□ -0.81
USF1-210ENST00000531842 YWHABP31946 246 aaKnown RBP9.97□□□□□ -0.81
USF1-210ENST00000531842 OR1D2P34982 312 aa9.97□□□□□ -0.81
USF1-210ENST00000531842 SATB1Q01826 763 aa9.97□□□□□ -0.81
USF1-210ENST00000531842 AKAP17AQ02040 695 aaKnown RBP9.97□□□□□ -0.81
USF1-210ENST00000531842 PRKCQQ04759 706 aa9.97□□□□□ -0.81
USF1-210ENST00000531842 BMP2KLQ5H9B9 411 aa9.97□□□□□ -0.81
USF1-210ENST00000531842 EARS2Q5JPH6 523 aaKnown RBP9.97□□□□□ -0.81
USF1-210ENST00000531842 LIN9Q5TKA1 542 aa9.97□□□□□ -0.81
USF1-210ENST00000531842 NOTUMQ6P988 496 aa9.97□□□□□ -0.81
USF1-210ENST00000531842 ELMSAN1Q6PJG2 1045 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms