RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 AP3M2P53677 418 aa10.73□□□□□ -0.69
CTNND1-228ENST00000531007 CAP1Q01518 475 aa10.73□□□□□ -0.69
CTNND1-228ENST00000531007 MBTD1Q05BQ5 628 aa10.73□□□□□ -0.69
CTNND1-228ENST00000531007 MCL1Q07820 350 aa10.73□□□□□ -0.69
CTNND1-228ENST00000531007 KCNH2Q12809 1159 aa10.73□□□□□ -0.69
CTNND1-228ENST00000531007 DRP2Q13474 957 aa10.73□□□□□ -0.69
CTNND1-228ENST00000531007 PRPF4BQ13523 1007 aaKnown RBP10.73□□□□□ -0.69
CTNND1-228ENST00000531007 SNRNP35Q16560 246 aaKnown RBP10.73□□□□□ -0.69
CTNND1-228ENST00000531007 KSR1Q8IVT5 923 aa10.73□□□□□ -0.69
CTNND1-228ENST00000531007 LRRC8AQ8IWT6 810 aa10.73□□□□□ -0.69
CTNND1-228ENST00000531007 SLC35C1Q96A29 364 aa10.73□□□□□ -0.69
CTNND1-228ENST00000531007 MFSD14AQ96MC6 490 aa10.73□□□□□ -0.69
CTNND1-228ENST00000531007 NLRP4Q96MN2 994 aa10.73□□□□□ -0.69
CTNND1-228ENST00000531007 PANX2Q96RD6 677 aa10.73□□□□□ -0.69
CTNND1-228ENST00000531007 ACO2Q99798 780 aaKnown RBP10.73□□□□□ -0.69
CTNND1-228ENST00000531007 CBWD1Q9BRT8 395 aa10.73□□□□□ -0.69
CTNND1-228ENST00000531007 IFT122Q9HBG6 1241 aa10.73□□□□□ -0.69
CTNND1-228ENST00000531007 PLCB1Q9NQ66 1216 aa10.73□□□□□ -0.69
CTNND1-228ENST00000531007 GTF2IRD1Q9UHL9 959 aa10.73□□□□□ -0.69
CTNND1-228ENST00000531007 FBXL5Q9UKA1 691 aa10.73□□□□□ -0.69
CTNND1-228ENST00000531007 AGO2Q9UKV8 859 aaKnown RBP10.73□□□□□ -0.69
CTNND1-228ENST00000531007 TNFSF13BQ9Y275 285 aa10.73□□□□□ -0.69
CTNND1-228ENST00000531007 SLC27A5Q9Y2P5 690 aa10.73□□□□□ -0.69
CTNND1-228ENST00000531007 PTPN22Q9Y2R2 807 aa10.73□□□□□ -0.69
CTNND1-228ENST00000531007 SCN10AQ9Y5Y9 1956 aa10.72□□□□□ -0.69
CTNND1-228ENST00000531007 M0QZ92 97 aa10.72□□□□□ -0.69
CTNND1-228ENST00000531007 PGK1P00558 417 aa10.72□□□□□ -0.69
CTNND1-228ENST00000531007 TRIM21P19474 475 aaKnown RBP10.72□□□□□ -0.69
CTNND1-228ENST00000531007 PROZP22891 400 aa10.72□□□□□ -0.69
CTNND1-228ENST00000531007 PTGS1P23219 599 aa10.72□□□□□ -0.69
CTNND1-228ENST00000531007 KCNJ6P48051 423 aa10.72□□□□□ -0.69
CTNND1-228ENST00000531007 VAMP7P51809 220 aa10.72□□□□□ -0.69
CTNND1-228ENST00000531007 CRYBB1P53674 252 aaPredicted RBP10.72□□□□□ -0.69
CTNND1-228ENST00000531007 USP46P62068 366 aa10.72□□□□□ -0.69
CTNND1-228ENST00000531007 TRIM32Q13049 653 aa10.72□□□□□ -0.69
CTNND1-228ENST00000531007 ARID5BQ14865 1188 aa10.72□□□□□ -0.69
CTNND1-228ENST00000531007 KCNA10Q16322 511 aa10.72□□□□□ -0.69
CTNND1-228ENST00000531007 PKN2Q16513 984 aaKnown RBP10.72□□□□□ -0.69
CTNND1-228ENST00000531007 AMHR2Q16671 573 aa10.72□□□□□ -0.69
CTNND1-228ENST00000531007 GBP6Q6ZN66 633 aa10.72□□□□□ -0.69
CTNND1-228ENST00000531007 ZSCAN30Q86W11 494 aa10.72□□□□□ -0.69
CTNND1-228ENST00000531007 ANKLE1Q8NAG6 615 aa10.72□□□□□ -0.69
CTNND1-228ENST00000531007 LENG1Q96BZ8 264 aaPredicted RBP10.72□□□□□ -0.69
CTNND1-228ENST00000531007 EEF2KMTQ96G04 330 aa10.72□□□□□ -0.69
CTNND1-228ENST00000531007 FAM81BQ96LP2 452 aa10.72□□□□□ -0.69
CTNND1-228ENST00000531007 GLT1D1Q96MS3 346 aa10.72□□□□□ -0.69
CTNND1-228ENST00000531007 HDAC6Q9UBN7 1215 aa10.72□□□□□ -0.69
CTNND1-228ENST00000531007 MYO6Q9UM54 1294 aa10.72□□□□□ -0.69
CTNND1-228ENST00000531007 CAPN11Q9UMQ6 739 aa10.72□□□□□ -0.69
CTNND1-228ENST00000531007 LUC7L2Q9Y383 392 aaKnown RBP10.72□□□□□ -0.69
CTNND1-228ENST00000531007 CNTNAP2Q9UHC6 1331 aa10.72□□□□□ -0.69
CTNND1-228ENST00000531007 A0A087WZ62 844 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 ANKRD63C9JTQ0 380 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 OGTO15294 1046 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 ERLIN2O94905 339 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 MCF2P10911 925 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 MATR3P43243 847 aaKnown RBP eCLIP10.71□□□□□ -0.69
CTNND1-228ENST00000531007 FMO5P49326 533 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 CASP4P49662 377 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 ACLYP53396 1101 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 NLRP11P59045 1033 aaKnown RBP10.71□□□□□ -0.69
CTNND1-228ENST00000531007 CLDN10P78369 228 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 ZBED6P86452 979 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 CYP24A1Q07973 514 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 NOLC1Q14978 699 aaKnown RBP eCLIP10.71□□□□□ -0.69
CTNND1-228ENST00000531007 PSMD6Q15008 389 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 SYCP1Q15431 976 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 EXOC3L4Q17RC7 722 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 NBPF20Q3BBV1 942 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 DCAF17Q5H9S7 520 aaPredicted RBP10.71□□□□□ -0.69
CTNND1-228ENST00000531007 ATF7IP2Q5U623 682 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 TCERG1LQ5VWI1 586 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 SLC39A4Q6P5W5 647 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 MPZL3Q6UWV2 235 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 CXCL17Q6UXB2 119 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 NEK11Q8NG66 645 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 THAP11Q96EK4 314 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 PCMTD1Q96MG8 357 aaPredicted RBP10.71□□□□□ -0.69
CTNND1-228ENST00000531007 SCLT1Q96NL6 688 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 FDXACB1Q9BRP7 624 aaPredicted RBP10.71□□□□□ -0.69
CTNND1-228ENST00000531007 ADPGKQ9BRR6 497 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 TCHPQ9BT92 498 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 MSTO1Q9BUK6 570 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 TARS2Q9BW92 718 aaKnown RBP10.71□□□□□ -0.69
CTNND1-228ENST00000531007 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.71□□□□□ -0.69
CTNND1-228ENST00000531007 ADAMTS10Q9H324 1103 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 PTPRHQ9HD43 1115 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 ZNHIT6Q9NWK9 470 aaKnown RBP10.71□□□□□ -0.69
CTNND1-228ENST00000531007 SIK3Q9Y2K2 1263 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 USP20Q9Y2K6 914 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 ZKSCAN5Q9Y2L8 839 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.71□□□□□ -0.69
CTNND1-228ENST00000531007 PTCH2Q9Y6C5 1203 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 SQORQ9Y6N5 450 aa10.71□□□□□ -0.69
CTNND1-228ENST00000531007 MYADML2A6NDP7 307 aa10.7□□□□□ -0.7
CTNND1-228ENST00000531007 KBTBD13C9JR72 458 aa10.7□□□□□ -0.7
CTNND1-228ENST00000531007 DNM1LO00429 736 aa10.7□□□□□ -0.7
CTNND1-228ENST00000531007 TREHO43280 583 aa10.7□□□□□ -0.7
CTNND1-228ENST00000531007 GPR32O75388 356 aa10.7□□□□□ -0.7
CTNND1-228ENST00000531007 VTNP04004 478 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms