RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 C5orf42Q9H799 3197 aa20.54■□□□□ 0.88
GMDS-208ENST00000530927 FAM178BQ8IXR5 827 aa20.53■□□□□ 0.88
GMDS-208ENST00000530927 TMEM130Q8N3G9 435 aa20.53■□□□□ 0.88
GMDS-208ENST00000530927 TMEM169Q96HH4 297 aa20.53■□□□□ 0.88
GMDS-208ENST00000530927 ASB2Q96Q27 587 aa20.53■□□□□ 0.88
GMDS-208ENST00000530927 GDPD2Q9HCC8 539 aa20.53■□□□□ 0.88
GMDS-208ENST00000530927 BRWD1Q9NSI6 2320 aa20.53■□□□□ 0.88
GMDS-208ENST00000530927 TBX20Q9UMR3 447 aa20.53■□□□□ 0.88
GMDS-208ENST00000530927 LZTS1Q9Y250 596 aa20.53■□□□□ 0.88
GMDS-208ENST00000530927 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.53■□□□□ 0.88
GMDS-208ENST00000530927 TISP43B9A030 160 aa20.53■□□□□ 0.88
GMDS-208ENST00000530927 POLR2DO15514 142 aaKnown RBP20.53■□□□□ 0.88
GMDS-208ENST00000530927 CASP1P29466 404 aa20.53■□□□□ 0.88
GMDS-208ENST00000530927 LTBRP36941 435 aa20.53■□□□□ 0.88
GMDS-208ENST00000530927 KRT17Q04695 432 aa20.53■□□□□ 0.88
GMDS-208ENST00000530927 CLUL1Q15846 466 aa20.53■□□□□ 0.88
GMDS-208ENST00000530927 RESP18Q5W5W9 173 aa20.53■□□□□ 0.88
GMDS-208ENST00000530927 ATL3Q6DD88 541 aa20.53■□□□□ 0.88
GMDS-208ENST00000530927 MPZL3Q6UWV2 235 aa20.53■□□□□ 0.88
GMDS-208ENST00000530927 TMC7Q7Z402 723 aa20.53■□□□□ 0.88
GMDS-208ENST00000530927 VPS52Q8N1B4 723 aa20.53■□□□□ 0.88
GMDS-208ENST00000530927 VN1R2Q8NFZ6 395 aa20.53■□□□□ 0.88
GMDS-208ENST00000530927 ATXN2LQ8WWM7 1075 aaKnown RBP20.53■□□□□ 0.88
GMDS-208ENST00000530927 BICD1Q96G01 975 aa20.53■□□□□ 0.88
GMDS-208ENST00000530927 RPS6KC1Q96S38 1066 aa20.53■□□□□ 0.88
GMDS-208ENST00000530927 TCHPQ9BT92 498 aa20.53■□□□□ 0.88
GMDS-208ENST00000530927 FAN1Q9Y2M0 1017 aa20.53■□□□□ 0.88
GMDS-208ENST00000530927 TCHHQ07283 1943 aa20.52■□□□□ 0.88
GMDS-208ENST00000530927 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.52■□□□□ 0.87
GMDS-208ENST00000530927 CASTOR2A6NHX0 329 aa20.52■□□□□ 0.87
GMDS-208ENST00000530927 TBX10O75333 385 aa20.52■□□□□ 0.87
GMDS-208ENST00000530927 ALDH2P05091 517 aa20.52■□□□□ 0.87
GMDS-208ENST00000530927 IGFBP6P24592 240 aaPredicted RBP20.52■□□□□ 0.87
GMDS-208ENST00000530927 CA8P35219 290 aa20.52■□□□□ 0.87
GMDS-208ENST00000530927 CASP5P51878 434 aa20.52■□□□□ 0.87
GMDS-208ENST00000530927 MRPS5P82675 430 aaKnown RBP20.52■□□□□ 0.87
GMDS-208ENST00000530927 COL19A1Q14993 1142 aa20.52■□□□□ 0.87
GMDS-208ENST00000530927 NAB2Q15742 525 aa20.52■□□□□ 0.87
GMDS-208ENST00000530927 ZBTB41Q5SVQ8 909 aa20.52■□□□□ 0.87
GMDS-208ENST00000530927 SLC39A4Q6P5W5 647 aa20.52■□□□□ 0.87
GMDS-208ENST00000530927 TAS1R1Q7RTX1 841 aa20.52■□□□□ 0.87
GMDS-208ENST00000530927 RSPH1Q8WYR4 309 aa20.52■□□□□ 0.87
GMDS-208ENST00000530927 HPS3Q969F9 1004 aa20.52■□□□□ 0.87
GMDS-208ENST00000530927 PABPC5Q96DU9 382 aaKnown RBP20.52■□□□□ 0.87
GMDS-208ENST00000530927 TMEM175Q9BSA9 504 aa20.52■□□□□ 0.87
GMDS-208ENST00000530927 PUF60Q9UHX1 559 aaKnown RBP20.52■□□□□ 0.87
GMDS-208ENST00000530927 COG5Q9UP83 839 aa20.52■□□□□ 0.87
GMDS-208ENST00000530927 MUC3AQ02505 3323 aa20.51■□□□□ 0.87
GMDS-208ENST00000530927 TRIP11Q15643 1979 aa20.51■□□□□ 0.87
GMDS-208ENST00000530927 GLP2RO95838 553 aa20.51■□□□□ 0.87
GMDS-208ENST00000530927 IDEP14735 1019 aa20.51■□□□□ 0.87
GMDS-208ENST00000530927 GRM5P41594 1212 aa20.51■□□□□ 0.87
GMDS-208ENST00000530927 KRT85P78386 507 aa20.51■□□□□ 0.87
GMDS-208ENST00000530927 KCNA1Q09470 495 aa20.51■□□□□ 0.87
GMDS-208ENST00000530927 GRIK3Q13003 919 aa20.51■□□□□ 0.87
GMDS-208ENST00000530927 CTC1Q2NKJ3 1217 aa20.51■□□□□ 0.87
GMDS-208ENST00000530927 GRAMD1CQ8IYS0 662 aa20.51■□□□□ 0.87
GMDS-208ENST00000530927 HASPINQ8TF76 798 aa20.51■□□□□ 0.87
GMDS-208ENST00000530927 SPATA32Q96LK8 384 aa20.51■□□□□ 0.87
GMDS-208ENST00000530927 NECAB3Q96P71 396 aaPredicted RBP20.51■□□□□ 0.87
GMDS-208ENST00000530927 COL25A1Q9BXS0 654 aaPredicted RBP20.51■□□□□ 0.87
GMDS-208ENST00000530927 ZBP1Q9H171 429 aa20.51■□□□□ 0.87
GMDS-208ENST00000530927 TLE6Q9H808 572 aa20.51■□□□□ 0.87
GMDS-208ENST00000530927 TCF20Q9UGU0 1960 aaKnown RBP20.51■□□□□ 0.87
GMDS-208ENST00000530927 ANKRD63C9JTQ0 380 aa20.5■□□□□ 0.87
GMDS-208ENST00000530927 TOM1L1O75674 476 aa20.5■□□□□ 0.87
GMDS-208ENST00000530927 MCF2P10911 925 aa20.5■□□□□ 0.87
GMDS-208ENST00000530927 MATR3P43243 847 aaKnown RBP eCLIP20.5■□□□□ 0.871e-6■■■□□ 17.3
GMDS-208ENST00000530927 NOLC1Q14978 699 aaKnown RBP eCLIP20.5■□□□□ 0.87
GMDS-208ENST00000530927 DDX53Q86TM3 631 aaKnown RBP20.5■□□□□ 0.87
GMDS-208ENST00000530927 GLIS3Q8NEA6 775 aa20.5■□□□□ 0.87
GMDS-208ENST00000530927 B3GALT6Q96L58 329 aa20.5■□□□□ 0.87
GMDS-208ENST00000530927 GOLGA2P5Q9HBQ8 144 aa20.5■□□□□ 0.87
GMDS-208ENST00000530927 KBTBD4Q9NVX7 518 aa20.5■□□□□ 0.87
GMDS-208ENST00000530927 A0A1B0GVL5 298 aa20.49■□□□□ 0.87
GMDS-208ENST00000530927 C2orf71A6NGG8 1288 aa20.49■□□□□ 0.87
GMDS-208ENST00000530927 MYBP10242 640 aa20.49■□□□□ 0.87
GMDS-208ENST00000530927 TNFSF9P41273 254 aa20.49■□□□□ 0.87
GMDS-208ENST00000530927 LIG4P49917 911 aa20.49■□□□□ 0.87
GMDS-208ENST00000530927 GTF2BQ00403 316 aa20.49■□□□□ 0.87
GMDS-208ENST00000530927 DUSP6Q16828 381 aa20.49■□□□□ 0.87
GMDS-208ENST00000530927 TJAP1Q5JTD0 557 aa20.49■□□□□ 0.87
GMDS-208ENST00000530927 LLGL2Q6P1M3 1020 aa20.49■□□□□ 0.87
GMDS-208ENST00000530927 ZPBP2Q6X784 338 aa20.49■□□□□ 0.87
GMDS-208ENST00000530927 ZNF720Q7Z2F6 126 aa20.49■□□□□ 0.87
GMDS-208ENST00000530927 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.49■□□□□ 0.87
GMDS-208ENST00000530927 ZMAT2Q96NC0 199 aaKnown RBP20.49■□□□□ 0.87
GMDS-208ENST00000530927 MRPL44Q9H9J2 332 aaKnown RBP20.49■□□□□ 0.87
GMDS-208ENST00000530927 PANK4Q9NVE7 773 aa20.49■□□□□ 0.87
GMDS-208ENST00000530927 BARX2Q9UMQ3 279 aaPredicted RBP20.49■□□□□ 0.87
GMDS-208ENST00000530927 FRMD3A2A2Y4 597 aa20.48■□□□□ 0.87
GMDS-208ENST00000530927 H0YCG3 227 aa20.48■□□□□ 0.87
GMDS-208ENST00000530927 HNRNPDLO14979 420 aaKnown RBP20.48■□□□□ 0.87
GMDS-208ENST00000530927 PPP1R37O75864 691 aa20.48■□□□□ 0.87
GMDS-208ENST00000530927 CXCL14O95715 111 aa20.48■□□□□ 0.87
GMDS-208ENST00000530927 THP07101 528 aa20.48■□□□□ 0.87
GMDS-208ENST00000530927 BMP1P13497 986 aa20.48■□□□□ 0.87
GMDS-208ENST00000530927 SOX4Q06945 474 aaPredicted RBP20.48■□□□□ 0.87
GMDS-208ENST00000530927 MCL1Q07820 350 aa20.48■□□□□ 0.87
GMDS-208ENST00000530927 ADAM15Q13444 863 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms