RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 LXNQ9BS40 222 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 RUSC1Q9BVN2 902 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 STRA6Q9BX79 667 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 GANQ9H2C0 597 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 UNC45AQ9H3U1 944 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 ZHX3Q9H4I2 956 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 IGFLR1Q9H665 355 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 AGO4Q9HCK5 861 aaKnown RBP6.07□□□□□ -1.44
PCF11-205ENST00000530906 KCNH7Q9NS40 1196 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 DMAC2Q9NW81 257 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 FAM53CQ9NYF3 392 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 ARHGAP20Q9P2F6 1191 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 CNOT7Q9UIV1 285 aaKnown RBP6.07□□□□□ -1.44
PCF11-205ENST00000530906 GUCA1BQ9UMX6 200 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 ADAMTS5Q9UNA0 930 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 EXOC7Q9UPT5 735 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 PCDHA13Q9Y5I0 950 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 MYH11P35749 1972 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 NFASCO94856 1347 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 DHX15O43143 795 aaKnown RBP6.06□□□□□ -1.44
PCF11-205ENST00000530906 NOL4O94818 638 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 ZRANB2O95218 330 aaKnown RBP eCLIP6.06□□□□□ -1.44
PCF11-205ENST00000530906 ALAS1P13196 640 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 KRT13P13646 458 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 PLS3P13797 630 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 UCHL3P15374 230 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 FERP16591 822 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 PTPRAP18433 802 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 COPB2P35606 906 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 MAGEA1P43355 309 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 SEC13P55735 322 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 RTP1P59025 263 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 RPS6P62753 249 aaKnown RBP6.06□□□□□ -1.44
PCF11-205ENST00000530906 RAC1P63000 192 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 NRG1Q02297 640 aaPredicted RBP6.06□□□□□ -1.44
PCF11-205ENST00000530906 CYP4A11Q02928 519 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 KLHL30Q0D2K2 578 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 GPS2Q13227 327 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 CCINQ13939 588 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 COG2Q14746 738 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 PGM5Q15124 567 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 CLUL1Q15846 466 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 ZYXQ15942 572 aaKnown RBP6.06□□□□□ -1.44
PCF11-205ENST00000530906 ASIC2Q16515 512 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 SLC18A3Q16572 532 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 GNPTABQ3T906 1256 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 TDRD12Q587J7 1177 aaKnown RBP6.06□□□□□ -1.44
PCF11-205ENST00000530906 ODR4Q5SWX8 454 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 TEX35Q5T0J7 233 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 HGSNATQ68CP4 663 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 RNF207Q6ZRF8 634 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 INTS8Q75QN2 995 aaKnown RBP6.06□□□□□ -1.44
PCF11-205ENST00000530906 OTUD6AQ7L8S5 288 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 DMRTC2Q8IXT2 367 aaPredicted RBP6.06□□□□□ -1.44
PCF11-205ENST00000530906 FAM186BQ8IYM0 893 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 GPC2Q8N158 579 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 GLIS3Q8NEA6 775 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 CYP2W1Q8TAV3 490 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 NSUN6Q8TEA1 469 aaKnown RBP6.06□□□□□ -1.44
PCF11-205ENST00000530906 LMBR1Q8WVP7 490 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 KIFAP3Q92845 792 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 ATP6V0A1Q93050 837 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 GJA10Q969M2 543 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 SLC35C1Q96A29 364 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 BORCS6Q96GS4 357 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 FAM81BQ96LP2 452 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 CCDC43Q96MW1 224 aaKnown RBP6.06□□□□□ -1.44
PCF11-205ENST00000530906 INPP4AQ96PE3 977 aaPredicted RBP6.06□□□□□ -1.44
PCF11-205ENST00000530906 ACCSQ96QU6 501 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 SPAG5Q96R06 1193 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 PDCD2LQ9BRP1 358 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 SSBP4Q9BWG4 385 aaPredicted RBP6.06□□□□□ -1.44
PCF11-205ENST00000530906 LSM14BQ9BX40 385 aaKnown RBP6.06□□□□□ -1.44
PCF11-205ENST00000530906 TEX13BQ9BXU2 312 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 PDGFDQ9GZP0 370 aaPredicted RBP6.06□□□□□ -1.44
PCF11-205ENST00000530906 ACBD3Q9H3P7 528 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 RPAP3Q9H6T3 665 aaPredicted RBP6.06□□□□□ -1.44
PCF11-205ENST00000530906 ZFP64Q9NPA5 681 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 PXMP2Q9NR77 195 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 FBXO28Q9NVF7 368 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 HOXC10Q9NYD6 342 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 RGL1Q9NZL6 768 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 TMOD4Q9NZQ9 345 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 TBC1D7Q9P0N9 293 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 FBXO40Q9UH90 709 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 HACL1Q9UJ83 578 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 SNX12Q9UMY4 172 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 USP20Q9Y2K6 914 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 PPME1Q9Y570 386 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.06□□□□□ -1.44
PCF11-205ENST00000530906 ZMYM2Q9UBW7 1377 aa6.06□□□□□ -1.44
PCF11-205ENST00000530906 RLFQ13129 1914 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 PFASO15067 1338 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 SMCHD1A6NHR9 2005 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 A0A0A6YYK5 440 aaPredicted RBP6.05□□□□□ -1.44
PCF11-205ENST00000530906 LOC102724159A0A0B4J2E5 919 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 NPHP3-ACAD11A0A0J9YXS1 232 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 GRID2IPA4D2P6 1211 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 TGFBR3LH3BV60 316 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 NFIBO00712 420 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms