RNA–Protein interactions for RNA: ENST00000530565.5

CTSF-208, Transcript of cathepsin F, humanhuman

TSL 5

Gene CTSF, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-208ENST00000530565 RNF216Q9NWF9 866 aaPredicted RBP9.4□□□□□ -0.9
CTSF-208ENST00000530565 TMEM63CQ9P1W3 806 aa9.4□□□□□ -0.9
CTSF-208ENST00000530565 PRKAG3Q9UGI9 489 aa9.4□□□□□ -0.9
CTSF-208ENST00000530565 PCDHB7Q9Y5E2 793 aa9.4□□□□□ -0.9
CTSF-208ENST00000530565 CFAP54Q96N23 3096 aa9.4□□□□□ -0.9
CTSF-208ENST00000530565 KMT2EQ8IZD2 1858 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 ZNF623O75123 536 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 UPP2O95045 317 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 NPTXRO95502 500 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 EOMESO95936 686 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 PIGRP01833 764 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 STAG3L1P0CL83 205 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 ATF7P17544 494 aaPredicted RBP9.39□□□□□ -0.91
CTSF-208ENST00000530565 DLX2Q07687 328 aaPredicted RBP9.39□□□□□ -0.91
CTSF-208ENST00000530565 PSMD2Q13200 908 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 GPM6BQ13491 265 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 GSE1Q14687 1217 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 KCNB1Q14721 858 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 PTPROQ16827 1216 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 CTC1Q2NKJ3 1217 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 ZSCAN23Q3MJ62 389 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 L1TD1Q5T7N2 865 aaKnown RBP9.39□□□□□ -0.91
CTSF-208ENST00000530565 EEF1DP3Q658K8 133 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 ZPBP2Q6X784 338 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 STXBP4Q6ZWJ1 553 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 EPM2AIP1Q7L775 607 aaPredicted RBP9.39□□□□□ -0.91
CTSF-208ENST00000530565 ZNF598Q86UK7 904 aaKnown RBP9.39□□□□□ -0.91
CTSF-208ENST00000530565 ADHFE1Q8IWW8 467 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 TMEM192Q8IY95 271 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 CRIPAKQ8N1N5 446 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 GLIS3Q8NEA6 775 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 CCDC47Q96A33 483 aaKnown RBP9.39□□□□□ -0.91
CTSF-208ENST00000530565 BICD1Q96G01 975 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 SNX27Q96L92 541 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 ADPGKQ9BRR6 497 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 TARS2Q9BW92 718 aaKnown RBP9.39□□□□□ -0.91
CTSF-208ENST00000530565 EIF2AQ9BY44 585 aaKnown RBP9.39□□□□□ -0.91
CTSF-208ENST00000530565 TRIM6Q9C030 488 aaPredicted RBP9.39□□□□□ -0.91
CTSF-208ENST00000530565 NSUN3Q9H649 340 aaKnown RBP9.39□□□□□ -0.91
CTSF-208ENST00000530565 PTPRHQ9HD43 1115 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 SLC39A2Q9NP94 309 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 EXOC1Q9NV70 894 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 TMEM161AQ9NX61 479 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 LRFN2Q9ULH4 789 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 TNFSF13BQ9Y275 285 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 PCDHB2Q9Y5E7 798 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 PCDHB13Q9Y5F0 798 aa9.39□□□□□ -0.91
CTSF-208ENST00000530565 KIAA1671Q9BY89 1806 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 ABLIM1O14639 778 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 HNRNPDLO14979 420 aaKnown RBP9.38□□□□□ -0.91
CTSF-208ENST00000530565 EIF3DO15371 548 aaKnown RBP eCLIP9.38□□□□□ -0.91
CTSF-208ENST00000530565 TOM1L1O75674 476 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 DGKIO75912 1065 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 PRPF6O94906 941 aaKnown RBP9.38□□□□□ -0.91
CTSF-208ENST00000530565 RHOBTB3O94955 611 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 SMC2O95347 1197 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 PROZP22891 400 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 LIG4P49917 911 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 KCNA1Q09470 495 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 SMAD2Q15796 467 aaKnown RBP9.38□□□□□ -0.91
CTSF-208ENST00000530565 DCAF4L1Q3SXM0 396 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 ZNF568Q3ZCX4 644 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 MPZL3Q6UWV2 235 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 RBM43Q6ZSC3 357 aaKnown RBP9.38□□□□□ -0.91
CTSF-208ENST00000530565 APBB1IPQ7Z5R6 666 aaPredicted RBP9.38□□□□□ -0.91
CTSF-208ENST00000530565 MRPL10Q7Z7H8 261 aaKnown RBP9.38□□□□□ -0.91
CTSF-208ENST00000530565 RNF169Q8NCN4 708 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 SMG8Q8ND04 991 aaKnown RBP9.38□□□□□ -0.91
CTSF-208ENST00000530565 PRSS33Q8NF86 280 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 SPATA20Q8TB22 786 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 ZNF507Q8TCN5 953 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 SCFD1Q8WVM8 642 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 ERCC4Q92889 916 aaPredicted RBP9.38□□□□□ -0.91
CTSF-208ENST00000530565 SMARCE1Q969G3 411 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 PGBD4Q96DM1 585 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 GSDMAQ96QA5 445 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 ACCSQ96QU6 501 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 NUP62CLQ9H1M0 184 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 CDT1Q9H211 546 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 CLSTN2Q9H4D0 955 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 TMEM206Q9H813 350 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 RMND1Q9NWS8 449 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 ANKFY1Q9P2R3 1169 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 EXOC7Q9UPT5 735 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 IPPQ9Y573 584 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 PCDHA5Q9Y5H7 936 aa9.38□□□□□ -0.91
CTSF-208ENST00000530565 TECTAO75443 2155 aa9.37□□□□□ -0.91
CTSF-208ENST00000530565 UBE4BO95155 1302 aa9.37□□□□□ -0.91
CTSF-208ENST00000530565 ANKRD63C9JTQ0 380 aa9.37□□□□□ -0.91
CTSF-208ENST00000530565 C5orf67F2Z3F1 127 aa9.37□□□□□ -0.91
CTSF-208ENST00000530565 CLDN3O15551 220 aa9.37□□□□□ -0.91
CTSF-208ENST00000530565 HOXA2O43364 376 aa9.37□□□□□ -0.91
CTSF-208ENST00000530565 MBTPS2O43462 519 aa9.37□□□□□ -0.91
CTSF-208ENST00000530565 MCF2P10911 925 aa9.37□□□□□ -0.91
CTSF-208ENST00000530565 FGFR1P11362 822 aa9.37□□□□□ -0.91
CTSF-208ENST00000530565 ITGA4P13612 1032 aa9.37□□□□□ -0.91
CTSF-208ENST00000530565 HOXD13P35453 343 aa9.37□□□□□ -0.91
CTSF-208ENST00000530565 HYAL1Q12794 435 aa9.37□□□□□ -0.91
CTSF-208ENST00000530565 STK4Q13043 487 aa9.37□□□□□ -0.91
CTSF-208ENST00000530565 NOLC1Q14978 699 aaKnown RBP eCLIP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms