RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 KCTD12Q96CX2 325 aaKnown RBP10.03□□□□□ -0.8
VPS11-203ENST00000529545 CCDC51Q96ER9 411 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 CNTNAP3BQ96NU0 1288 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 SLC26A6Q9BXS9 759 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 RNF26Q9BY78 433 aaPredicted RBP10.03□□□□□ -0.8
VPS11-203ENST00000529545 CNTNAP3Q9BZ76 1288 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 TRIM6Q9C030 488 aaPredicted RBP10.03□□□□□ -0.8
VPS11-203ENST00000529545 CHST7Q9NS84 486 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 VPS54Q9P1Q0 977 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 CDV3Q9UKY7 258 aaKnown RBP10.03□□□□□ -0.8
VPS11-203ENST00000529545 CDH7Q9ULB5 785 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 IPPQ9Y573 584 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 PCDHGA2Q9Y5H1 932 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 DMXL1Q9Y485 3027 aa10.03□□□□□ -0.8
VPS11-203ENST00000529545 OTOGLQ3ZCN5 2332 aa10.02□□□□□ -0.8
VPS11-203ENST00000529545 CYP3A7-CYP3A51PA0A087WV96 503 aa10.02□□□□□ -0.81
VPS11-203ENST00000529545 GOLGA8CPA6NN73 597 aa10.02□□□□□ -0.81
VPS11-203ENST00000529545 MAP3K7O43318 606 aa10.02□□□□□ -0.81
VPS11-203ENST00000529545 TADA2AO75478 443 aa10.02□□□□□ -0.81
VPS11-203ENST00000529545 PAPLNO95428 1278 aa10.02□□□□□ -0.81
VPS11-203ENST00000529545 P4HBP07237 508 aaKnown RBP10.02□□□□□ -0.81
VPS11-203ENST00000529545 HNRNPA1P09651 372 aaKnown RBP eCLIP10.02□□□□□ -0.81
VPS11-203ENST00000529545 CYP3A7P24462 503 aa10.02□□□□□ -0.81
VPS11-203ENST00000529545 SCNN1GP51170 649 aa10.02□□□□□ -0.81
VPS11-203ENST00000529545 NPEPPSP55786 919 aa10.02□□□□□ -0.81
VPS11-203ENST00000529545 DSC1Q08554 894 aa10.02□□□□□ -0.81
VPS11-203ENST00000529545 LAMTOR4Q0VGL1 99 aa10.02□□□□□ -0.81
VPS11-203ENST00000529545 MLF2Q15773 248 aaPredicted RBP10.02□□□□□ -0.81
VPS11-203ENST00000529545 SLC44A4Q53GD3 710 aa10.02□□□□□ -0.81
VPS11-203ENST00000529545 FUT10Q6P4F1 479 aa10.02□□□□□ -0.81
VPS11-203ENST00000529545 LILRA6Q6PI73 481 aa10.02□□□□□ -0.81
VPS11-203ENST00000529545 RSPO2Q6UXX9 243 aaPredicted RBP10.02□□□□□ -0.81
VPS11-203ENST00000529545 Q6ZUG5 572 aa10.02□□□□□ -0.81
VPS11-203ENST00000529545 TRIM22Q8IYM9 498 aa10.02□□□□□ -0.81
VPS11-203ENST00000529545 SMG8Q8ND04 991 aaKnown RBP10.02□□□□□ -0.81
VPS11-203ENST00000529545 BRF1Q92994 677 aa10.02□□□□□ -0.81
VPS11-203ENST00000529545 B3GALT6Q96L58 329 aa10.02□□□□□ -0.81
VPS11-203ENST00000529545 NELL2Q99435 816 aa10.02□□□□□ -0.81
VPS11-203ENST00000529545 APOL6Q9BWW8 343 aa10.02□□□□□ -0.81
VPS11-203ENST00000529545 OSBPL6Q9BZF3 934 aa10.02□□□□□ -0.81
VPS11-203ENST00000529545 MINDY3Q9H8M7 445 aa10.02□□□□□ -0.81
VPS11-203ENST00000529545 ADAM28Q9UKQ2 775 aa10.02□□□□□ -0.81
VPS11-203ENST00000529545 PCDHA4Q9UN74 947 aa10.02□□□□□ -0.81
VPS11-203ENST00000529545 POLIQ9UNA4 740 aa10.02□□□□□ -0.81
VPS11-203ENST00000529545 GIT1Q9Y2X7 761 aa10.02□□□□□ -0.81
VPS11-203ENST00000529545 CACNA1BQ00975 2339 aa10.02□□□□□ -0.81
VPS11-203ENST00000529545 MYH15Q9Y2K3 1946 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 CACNA1IQ9P0X4 2223 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 CEP250Q9BV73 2442 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 FAM170BA6NMN3 283 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 INO80B-WBP1J3KQ70 363 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 EDIL3O43854 480 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 MARCH6O60337 910 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 XYLBO75191 536 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 LRRN2O75325 713 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 KRT37O76014 449 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 TDP2O95551 362 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 EFEMP2O95967 443 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 GLULP15104 373 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 TFDP1Q14186 410 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 MXD4Q14582 209 aaPredicted RBP10.01□□□□□ -0.81
VPS11-203ENST00000529545 PPM1LQ5SGD2 360 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 ZBTB41Q5SVQ8 909 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 MOXD1Q6UVY6 613 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 PARM1Q6UWI2 310 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 B3GNT9Q6UX72 402 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 GRASPQ7Z6J2 395 aaPredicted RBP10.01□□□□□ -0.81
VPS11-203ENST00000529545 FERMT3Q86UX7 667 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 MAML2Q8IZL2 1156 aaPredicted RBP10.01□□□□□ -0.81
VPS11-203ENST00000529545 ST13P5Q8NFI4 369 aaPredicted RBP10.01□□□□□ -0.81
VPS11-203ENST00000529545 FGF14Q92915 247 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 ZFP42Q96MM3 310 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 RPP25Q9BUL9 199 aaKnown RBP10.01□□□□□ -0.81
VPS11-203ENST00000529545 DDX23Q9BUQ8 820 aaKnown RBP10.01□□□□□ -0.81
VPS11-203ENST00000529545 GPR62Q9BZJ7 368 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 CSRNP2Q9H175 543 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 DHX33Q9H6R0 707 aaKnown RBP10.01□□□□□ -0.81
VPS11-203ENST00000529545 ZSCAN32Q9NX65 697 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 DDX25Q9UHL0 483 aaKnown RBP10.01□□□□□ -0.81
VPS11-203ENST00000529545 GMEB2Q9UKD1 530 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 USP18Q9UMW8 372 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 MRPS17Q9Y2R5 130 aaKnown RBP10.01□□□□□ -0.81
VPS11-203ENST00000529545 SF3B1O75533 1304 aaKnown RBP eCLIP10.01□□□□□ -0.81
VPS11-203ENST00000529545 DMDP11532 3685 aa10.01□□□□□ -0.81
VPS11-203ENST00000529545 NCOR2Q9Y618 2525 aa10□□□□□ -0.81
VPS11-203ENST00000529545 TBC1D4O60343 1298 aa10□□□□□ -0.81
VPS11-203ENST00000529545 TSPAN1O60635 241 aa10□□□□□ -0.81
VPS11-203ENST00000529545 IFNAR1P17181 557 aa10□□□□□ -0.81
VPS11-203ENST00000529545 RPL17P18621 184 aaKnown RBP10□□□□□ -0.81
VPS11-203ENST00000529545 ATXN1P54253 815 aaKnown RBP10□□□□□ -0.81
VPS11-203ENST00000529545 GRIK3Q13003 919 aa10□□□□□ -0.81
VPS11-203ENST00000529545 PPP2R5CQ13362 524 aa10□□□□□ -0.81
VPS11-203ENST00000529545 EMC2Q15006 297 aa10□□□□□ -0.81
VPS11-203ENST00000529545 NTRK3Q16288 839 aa10□□□□□ -0.81
VPS11-203ENST00000529545 XKR9Q5GH70 373 aa10□□□□□ -0.81
VPS11-203ENST00000529545 GALNT17Q6IS24 598 aa10□□□□□ -0.81
VPS11-203ENST00000529545 PDXDC1Q6P996 788 aa10□□□□□ -0.81
VPS11-203ENST00000529545 BLOC1S2Q6QNY1 142 aa10□□□□□ -0.81
VPS11-203ENST00000529545 BLIDQ8IZY5 108 aa10□□□□□ -0.81
VPS11-203ENST00000529545 ETNPPLQ8TBG4 499 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms