RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 EVPLQ92817 2033 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 TATDN2Q93075 761 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 TOP1MTQ969P6 601 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 CHAMP1Q96JM3 812 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 DMRTB1Q96MA1 342 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 NLRP4Q96MN2 994 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 CITED4Q96RK1 184 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 NFKBIZQ9BYH8 718 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 PANK2Q9BZ23 570 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 TMX1Q9H3N1 280 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 POLD4Q9HCU8 107 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 GPRC5CQ9NQ84 441 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 BLOC1S4Q9NUP1 217 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 PUF60Q9UHX1 559 aaKnown RBP6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 PRKAB1Q9Y478 270 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 PCDHGB7Q9Y5F8 929 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 TET1Q8NFU7 2136 aa6.9□□□□□ -1.3
ATPAF1-209ENST00000529214 A0A087X0B3 334 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 GRXCR1A8MXD5 290 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 SOX1O00570 391 aaPredicted RBP6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 PPP1R12AO14974 1030 aaPredicted RBP6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 MGEA5O60502 916 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 AMHP03971 560 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 NEFHP12036 1026 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 ATP2A2P16615 1042 aaKnown RBP6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 GUCY2CP25092 1073 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 TXLNAP40222 546 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 PEX19P40855 299 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 KCNJ6P48051 423 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 ME1P48163 572 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 FAM189BP81408 668 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 DEFB103AP81534 67 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 CAPSQ13938 189 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 TFDP1Q14186 410 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 RRAGBQ5VZM2 374 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 ADALQ6DHV7 355 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 DESI1Q6ICB0 168 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 FAM109BQ6ICB4 259 aaPredicted RBP6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 SHC4Q6S5L8 630 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 CCDC73Q6ZRK6 1079 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 CAPN12Q6ZSI9 719 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 C11orf96Q7Z7L8 435 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 DAW1Q8N136 415 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 CRIPAKQ8N1N5 446 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 TPCN2Q8NHX9 752 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 LEO1Q8WVC0 666 aaPredicted RBP6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 LARP4BQ92615 738 aaKnown RBP6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 RAD54LQ92698 747 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 KIFAP3Q92845 792 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 SCLT1Q96NL6 688 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 SLC9A7Q96T83 725 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 ARPC5LQ9BPX5 153 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 HINFPQ9BQA5 517 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 NTPCRQ9BSD7 190 aaKnown RBP6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 RUSC1Q9BVN2 902 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 TIPINQ9BVW5 301 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 SCAND2PQ9GZW5 306 aaPredicted RBP6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 POLR3FQ9H1D9 316 aaPredicted RBP6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 MINDY3Q9H8M7 445 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 CHST12Q9NRB3 414 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 RGS18Q9NS28 235 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 KCND2Q9NZV8 630 aa6.9□□□□□ -1.31
ATPAF1-209ENST00000529214 LAMA3Q16787 3333 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 CFAP69A5D8W1 941 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 HIP1RO75146 1068 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 GJB5O95377 273 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 SSBP05455 408 aaKnown RBP eCLIP6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 ZSCAN20P17040 1043 aaPredicted RBP6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 NAT1P18440 290 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 FGFR4P22455 802 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 SFPQP23246 707 aaKnown RBP eCLIP6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 PAX7P23759 505 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 CMA1P23946 247 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 HOXA11P31270 313 aaPredicted RBP6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 NAMPTP43490 491 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 FXR1P51114 621 aaKnown RBP eCLIP6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 MAPK7Q13164 816 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 PPP2R5AQ15172 486 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 PCBP1Q15365 356 aaKnown RBP eCLIP6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 RESP18Q5W5W9 173 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 ICE2Q659A1 982 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 SLC24A5Q71RS6 500 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 SV2BQ7L1I2 683 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 TMCO2Q7Z6W1 182 aaPredicted RBP6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 FMNL3Q8IVF7 1028 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 HERC6Q8IVU3 1022 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 MYOCDQ8IZQ8 938 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 RASSF8Q8NHQ8 419 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 LINC01599Q8WXQ3 324 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 BSNDQ8WZ55 320 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 CRELD1Q96HD1 420 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 IFT74Q96LB3 600 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 RAD9AQ99638 391 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 ADAM2Q99965 735 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 PBX4Q9BYU1 374 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 C17orf75Q9HAS0 396 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 CHMP5Q9NZZ3 219 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 STK17AQ9UEE5 414 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 PCDHB9Q9Y5E1 797 aa6.89□□□□□ -1.31
ATPAF1-209ENST00000529214 TANC1Q9C0D5 1861 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms