RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 LXNQ9BS40 222 aa7.9□□□□□ -1.14
ITGB1-218ENST00000528877 C2orf49Q9BVC5 232 aaPredicted RBP7.9□□□□□ -1.14
ITGB1-218ENST00000528877 PHACTR1Q9C0D0 580 aa7.9□□□□□ -1.14
ITGB1-218ENST00000528877 FOXP1Q9H334 677 aaPredicted RBP7.9□□□□□ -1.14
ITGB1-218ENST00000528877 DHX33Q9H6R0 707 aaKnown RBP7.9□□□□□ -1.14
ITGB1-218ENST00000528877 CYP26B1Q9NR63 512 aa7.9□□□□□ -1.14
ITGB1-218ENST00000528877 WRAP73Q9P2S5 460 aaPredicted RBP7.9□□□□□ -1.14
ITGB1-218ENST00000528877 AKT3Q9Y243 479 aa7.9□□□□□ -1.14
ITGB1-218ENST00000528877 MRPL42Q9Y6G3 142 aaKnown RBP7.9□□□□□ -1.14
ITGB1-218ENST00000528877 FNDC1Q4ZHG4 1894 aaPredicted RBP7.89□□□□□ -1.15
ITGB1-218ENST00000528877 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.89□□□□□ -1.15
ITGB1-218ENST00000528877 DENND3A2RUS2 1198 aa7.89□□□□□ -1.15
ITGB1-218ENST00000528877 DCDC2BA2VCK2 349 aa7.89□□□□□ -1.15
ITGB1-218ENST00000528877 BTBD18B2RXH4 712 aa7.89□□□□□ -1.15
ITGB1-218ENST00000528877 YWHABP31946 246 aaKnown RBP7.89□□□□□ -1.15
ITGB1-218ENST00000528877 TRAPPC10P48553 1259 aa7.89□□□□□ -1.15
ITGB1-218ENST00000528877 DNM2P50570 870 aa7.89□□□□□ -1.15
ITGB1-218ENST00000528877 DRP2Q13474 957 aa7.89□□□□□ -1.15
ITGB1-218ENST00000528877 GPM6BQ13491 265 aa7.89□□□□□ -1.15
ITGB1-218ENST00000528877 ELOAQ14241 798 aaKnown RBP7.89□□□□□ -1.15
ITGB1-218ENST00000528877 RABEP1Q15276 862 aa7.89□□□□□ -1.15
ITGB1-218ENST00000528877 MTERF2Q49AM1 385 aa7.89□□□□□ -1.15
ITGB1-218ENST00000528877 KANK3Q6NY19 840 aa7.89□□□□□ -1.15
ITGB1-218ENST00000528877 FBXO18Q8NFZ0 1043 aa7.89□□□□□ -1.15
ITGB1-218ENST00000528877 SLC7A3Q8WY07 619 aa7.89□□□□□ -1.15
ITGB1-218ENST00000528877 PPM1EQ8WY54 764 aa7.89□□□□□ -1.15
ITGB1-218ENST00000528877 HSD17B14Q9BPX1 270 aa7.89□□□□□ -1.15
ITGB1-218ENST00000528877 NSUN3Q9H649 340 aaKnown RBP7.89□□□□□ -1.15
ITGB1-218ENST00000528877 ZSWIM4Q9H7M6 989 aa7.89□□□□□ -1.15
ITGB1-218ENST00000528877 UBE2ZQ9H832 354 aaPredicted RBP7.89□□□□□ -1.15
ITGB1-218ENST00000528877 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.89□□□□□ -1.152e-7■■■■■ 139.7
ITGB1-218ENST00000528877 CHST12Q9NRB3 414 aa7.89□□□□□ -1.15
ITGB1-218ENST00000528877 MARK1Q9P0L2 795 aa7.89□□□□□ -1.15
ITGB1-218ENST00000528877 GINS2Q9Y248 185 aa7.89□□□□□ -1.15
ITGB1-218ENST00000528877 EVPLQ92817 2033 aa7.89□□□□□ -1.15
ITGB1-218ENST00000528877 A0A0U1RQF3 1178 aa7.88□□□□□ -1.15
ITGB1-218ENST00000528877 TMEM150BA6NC51 233 aa7.88□□□□□ -1.15
ITGB1-218ENST00000528877 EFSO43281 561 aa7.88□□□□□ -1.15
ITGB1-218ENST00000528877 NCK2O43639 380 aa7.88□□□□□ -1.15
ITGB1-218ENST00000528877 BAG4O95429 457 aaKnown RBP7.88□□□□□ -1.15
ITGB1-218ENST00000528877 ATF7P17544 494 aaPredicted RBP7.88□□□□□ -1.15
ITGB1-218ENST00000528877 SFPQP23246 707 aaKnown RBP eCLIP7.88□□□□□ -1.15
ITGB1-218ENST00000528877 ADH6P28332 368 aa7.88□□□□□ -1.15
ITGB1-218ENST00000528877 TFF2Q03403 129 aa7.88□□□□□ -1.15
ITGB1-218ENST00000528877 UBE3AQ05086 875 aa7.88□□□□□ -1.15
ITGB1-218ENST00000528877 PCBP1Q15365 356 aaKnown RBP eCLIP7.88□□□□□ -1.15
ITGB1-218ENST00000528877 SAFBQ15424 915 aaKnown RBP eCLIP7.88□□□□□ -1.15
ITGB1-218ENST00000528877 CALCRLQ16602 461 aa7.88□□□□□ -1.15
ITGB1-218ENST00000528877 SWI5Q1ZZU3 235 aa7.88□□□□□ -1.15
ITGB1-218ENST00000528877 LEXMQ3ZCV2 418 aa7.88□□□□□ -1.15
ITGB1-218ENST00000528877 PLA2G4FQ68DD2 849 aa7.88□□□□□ -1.15
ITGB1-218ENST00000528877 LRRC69Q6ZNQ3 347 aa7.88□□□□□ -1.15
ITGB1-218ENST00000528877 NOSTRINQ8IVI9 506 aa7.88□□□□□ -1.15
ITGB1-218ENST00000528877 CCDC83Q8IWF9 413 aa7.88□□□□□ -1.15
ITGB1-218ENST00000528877 LRRC43Q8N309 656 aa7.88□□□□□ -1.15
ITGB1-218ENST00000528877 PABPC5Q96DU9 382 aaKnown RBP7.88□□□□□ -1.15
ITGB1-218ENST00000528877 C8orf76Q96K31 380 aa7.88□□□□□ -1.15
ITGB1-218ENST00000528877 PPP1R16BQ96T49 567 aa7.88□□□□□ -1.15
ITGB1-218ENST00000528877 GCOM2Q9BZD3 368 aaPredicted RBP7.88□□□□□ -1.15
ITGB1-218ENST00000528877 TMEM117Q9H0C3 514 aa7.88□□□□□ -1.15
ITGB1-218ENST00000528877 RNF19AQ9NV58 838 aa7.88□□□□□ -1.15
ITGB1-218ENST00000528877 LRFN2Q9ULH4 789 aa7.88□□□□□ -1.15
ITGB1-218ENST00000528877 PCDHB7Q9Y5E2 793 aa7.88□□□□□ -1.15
ITGB1-218ENST00000528877 ZMYM2Q9UBW7 1377 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 C5orf42Q9H799 3197 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 FSD2A1L4K1 749 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 CARNS1A5YM72 827 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 PIK3R2O00459 728 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 GRM6O15303 877 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 DTNBO60941 627 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 SLITRK3O94933 977 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 EOMESO95936 686 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 ITGB1P05556 798 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 LAG3P18627 525 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 MUTP22033 750 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 U2AF2P26368 475 aaKnown RBP eCLIP7.87□□□□□ -1.15
ITGB1-218ENST00000528877 RAB27AP51159 221 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 KCNQ1P51787 676 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 POLGP54098 1239 aaPredicted RBP7.87□□□□□ -1.15
ITGB1-218ENST00000528877 CTBSQ01459 385 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 POU5F1BQ06416 359 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 CAMK1Q14012 370 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 EMC2Q15006 297 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 TCEAL5Q5H9L2 206 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 NCAPH2Q6IBW4 605 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 OTUD6AQ7L8S5 288 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 TRMT1LQ7Z2T5 733 aaKnown RBP7.87□□□□□ -1.15
ITGB1-218ENST00000528877 ECHDC2Q86YB7 292 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 ALDH16A1Q8IZ83 802 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 BEND7Q8N7W2 519 aaPredicted RBP7.87□□□□□ -1.15
ITGB1-218ENST00000528877 TCP11Q8WWU5 503 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 PSPC1Q8WXF1 523 aaKnown RBP7.87□□□□□ -1.15
ITGB1-218ENST00000528877 DYDC2Q96IM9 177 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 CEP170P1Q96L14 293 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 TBC1D32Q96NH3 1257 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 CASD1Q96PB1 797 aa7.87□□□□□ -1.15
ITGB1-218ENST00000528877 UHRF1Q96T88 793 aaPredicted RBP7.87□□□□□ -1.15
ITGB1-218ENST00000528877 EIF2AK1Q9BQI3 630 aaKnown RBP7.87□□□□□ -1.15
ITGB1-218ENST00000528877 MRPL9Q9BYD2 267 aaKnown RBP7.87□□□□□ -1.15
ITGB1-218ENST00000528877 NFKBIZQ9BYH8 718 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms