RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 TARS2Q9BW92 718 aaKnown RBP13.3□□□□□ -0.28
TRAPPC4-209ENST00000528230 MARCH5Q9NX47 278 aa13.3□□□□□ -0.28
TRAPPC4-209ENST00000528230 KLK14Q9P0G3 267 aa13.3□□□□□ -0.28
TRAPPC4-209ENST00000528230 SSX2IPQ9Y2D8 614 aa13.3□□□□□ -0.28
TRAPPC4-209ENST00000528230 NPHP3-ACAD11A0A0J9YXS1 232 aa13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 LILRB3O75022 631 aa13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 CLASP2O75122 1294 aaKnown RBP13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 PPP6R2O75170 966 aa13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 SOD2P04179 222 aa13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 ZSCAN22P10073 491 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 MCF2P10911 925 aa13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 HOXB8P17481 243 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 ABCD1P33897 745 aa13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 GRM5P41594 1212 aa13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 NCKAP1LP55160 1127 aa13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 DHX8Q14562 1220 aaKnown RBP13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 STK38Q15208 465 aa13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 SPECC1Q5M775 1068 aa13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 RRAGBQ5VZM2 374 aa13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 ATL3Q6DD88 541 aa13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 ZPBP2Q6X784 338 aa13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 HAUS6Q7Z4H7 955 aa13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 PPFIBP1Q86W92 1011 aa13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 GPR65Q8IYL9 337 aa13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 RNF168Q8IYW5 571 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 SMRP1Q8NCR6 262 aa13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 VN1R2Q8NFZ6 395 aa13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 CASP10Q92851 521 aa13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 CLIC6Q96NY7 704 aa13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 TCHPQ9BT92 498 aa13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 CCDC94Q9BW85 323 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 VN1R3Q9BXE9 311 aa13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 CDT1Q9H211 546 aa13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 PARVGQ9HBI0 331 aa13.29□□□□□ -0.28
TRAPPC4-209ENST00000528230 ABLIM1O14639 778 aa13.28□□□□□ -0.28
TRAPPC4-209ENST00000528230 PTGESO14684 152 aa13.28□□□□□ -0.28
TRAPPC4-209ENST00000528230 SPTLC2O15270 562 aa13.28□□□□□ -0.28
TRAPPC4-209ENST00000528230 TOM1L1O75674 476 aa13.28□□□□□ -0.28
TRAPPC4-209ENST00000528230 FAM13AO94988 1023 aa13.28□□□□□ -0.28
TRAPPC4-209ENST00000528230 YEATS4O95619 227 aa13.28□□□□□ -0.28
TRAPPC4-209ENST00000528230 F13A1P00488 732 aa13.28□□□□□ -0.28
TRAPPC4-209ENST00000528230 KRT18P05783 430 aaKnown RBP13.28□□□□□ -0.28
TRAPPC4-209ENST00000528230 YARSP54577 528 aaKnown RBP13.28□□□□□ -0.28
TRAPPC4-209ENST00000528230 PTPN14Q15678 1187 aa13.28□□□□□ -0.28
TRAPPC4-209ENST00000528230 ZNF568Q3ZCX4 644 aa13.28□□□□□ -0.28
TRAPPC4-209ENST00000528230 XKR4Q5GH76 650 aa13.28□□□□□ -0.28
TRAPPC4-209ENST00000528230 ANKRD54Q6NXT1 300 aa13.28□□□□□ -0.28
TRAPPC4-209ENST00000528230 MPZL3Q6UWV2 235 aa13.28□□□□□ -0.28
TRAPPC4-209ENST00000528230 CCDC73Q6ZRK6 1079 aa13.28□□□□□ -0.28
TRAPPC4-209ENST00000528230 MYCT1Q8N699 235 aa13.28□□□□□ -0.28
TRAPPC4-209ENST00000528230 TMEM87AQ8NBN3 555 aa13.28□□□□□ -0.28
TRAPPC4-209ENST00000528230 HERC2P3Q9BVR0 1158 aa13.28□□□□□ -0.28
TRAPPC4-209ENST00000528230 EMILIN2Q9BXX0 1053 aa13.28□□□□□ -0.28
TRAPPC4-209ENST00000528230 MRPL17Q9NRX2 175 aaKnown RBP13.28□□□□□ -0.28
TRAPPC4-209ENST00000528230 TOPORSQ9NS56 1045 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC4-209ENST00000528230 BARX2Q9UMQ3 279 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC4-209ENST00000528230 GDAQ9Y2T3 454 aa13.28□□□□□ -0.28
TRAPPC4-209ENST00000528230 PRG3Q9Y2Y8 225 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC4-209ENST00000528230 HCFC2Q9Y5Z7 792 aa13.28□□□□□ -0.28
TRAPPC4-209ENST00000528230 CUL9Q8IWT3 2517 aa13.27□□□□□ -0.29
TRAPPC4-209ENST00000528230 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC4-209ENST00000528230 TRAK2O60296 914 aa13.27□□□□□ -0.29
TRAPPC4-209ENST00000528230 C1RP00736 705 aa13.27□□□□□ -0.29
TRAPPC4-209ENST00000528230 CA8P35219 290 aa13.27□□□□□ -0.29
TRAPPC4-209ENST00000528230 HSP90AA2PQ14568 343 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC4-209ENST00000528230 NAB2Q15742 525 aa13.27□□□□□ -0.29
TRAPPC4-209ENST00000528230 CLUL1Q15846 466 aa13.27□□□□□ -0.29
TRAPPC4-209ENST00000528230 KIAA0319Q5VV43 1072 aa13.27□□□□□ -0.29
TRAPPC4-209ENST00000528230 ALKAL1Q6UXT8 129 aa13.27□□□□□ -0.29
TRAPPC4-209ENST00000528230 SV2BQ7L1I2 683 aa13.27□□□□□ -0.29
TRAPPC4-209ENST00000528230 ADHFE1Q8IWW8 467 aa13.27□□□□□ -0.29
TRAPPC4-209ENST00000528230 SLC22A17Q8WUG5 538 aa13.27□□□□□ -0.29
TRAPPC4-209ENST00000528230 ACAP3Q96P50 834 aa13.27□□□□□ -0.29
TRAPPC4-209ENST00000528230 S1PR5Q9H228 398 aa13.27□□□□□ -0.29
TRAPPC4-209ENST00000528230 ST6GALNAC4Q9H4F1 302 aa13.27□□□□□ -0.29
TRAPPC4-209ENST00000528230 CHST7Q9NS84 486 aa13.27□□□□□ -0.29
TRAPPC4-209ENST00000528230 TFIP11Q9UBB9 837 aaKnown RBP13.27□□□□□ -0.29
TRAPPC4-209ENST00000528230 ADAM28Q9UKQ2 775 aa13.27□□□□□ -0.29
TRAPPC4-209ENST00000528230 MTCL1Q9Y4B5 1905 aaKnown RBP13.27□□□□□ -0.29
TRAPPC4-209ENST00000528230 TTC28Q96AY4 2481 aa13.27□□□□□ -0.29
TRAPPC4-209ENST00000528230 C19orf67A6NJJ6 358 aa13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 CLDN3O15551 220 aa13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 TBCAO75347 108 aaKnown RBP13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 TADA2AO75478 443 aa13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 PIGRP01833 764 aa13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 URODP06132 367 aa13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 GLUD2P49448 558 aa13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 RBM10P98175 930 aaKnown RBP13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 GTF2BQ00403 316 aa13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 DSG1Q02413 1049 aa13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 MCL1Q07820 350 aa13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 PDCD11Q14690 1871 aaKnown RBP13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 USP41Q3LFD5 358 aa13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 TPRNQ4KMQ1 711 aa13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 FUT10Q6P4F1 479 aa13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 SYCE2Q6PIF2 218 aa13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 ZBTB33Q86T24 672 aa13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 GJD3Q8N144 294 aa13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 AUTS2Q8WXX7 1259 aa13.26□□□□□ -0.29
TRAPPC4-209ENST00000528230 SUSD6Q92537 303 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms