RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.78■□□□□ 0.92
CAPN1-206ENST00000526966 TRIP11Q15643 1979 aa20.77■□□□□ 0.92
CAPN1-206ENST00000526966 ANHXE9PGG2 379 aa20.77■□□□□ 0.92
CAPN1-206ENST00000526966 USO1O60763 962 aaKnown RBP20.77■□□□□ 0.92
CAPN1-206ENST00000526966 ZMYND10O75800 440 aa20.77■□□□□ 0.92
CAPN1-206ENST00000526966 LAMP2P13473 410 aa20.77■□□□□ 0.92
CAPN1-206ENST00000526966 ANKRD1Q15327 319 aa20.77■□□□□ 0.92
CAPN1-206ENST00000526966 CDCA2Q69YH5 1023 aaPredicted RBP20.77■□□□□ 0.92
CAPN1-206ENST00000526966 PIDD1Q9HB75 910 aa20.77■□□□□ 0.92
CAPN1-206ENST00000526966 KLK14Q9P0G3 267 aa20.77■□□□□ 0.92
CAPN1-206ENST00000526966 SF3B1O75533 1304 aaKnown RBP eCLIP20.77■□□□□ 0.91
CAPN1-206ENST00000526966 CACNA1IQ9P0X4 2223 aa20.76■□□□□ 0.91
CAPN1-206ENST00000526966 RPL17P18621 184 aaKnown RBP20.76■□□□□ 0.91
CAPN1-206ENST00000526966 TXKP42681 527 aa20.76■□□□□ 0.91
CAPN1-206ENST00000526966 ANAPC15P60006 121 aa20.76■□□□□ 0.91
CAPN1-206ENST00000526966 FOXK2Q01167 660 aa20.76■□□□□ 0.91
CAPN1-206ENST00000526966 TUSC3Q13454 348 aa20.76■□□□□ 0.91
CAPN1-206ENST00000526966 HTR4Q13639 388 aa20.76■□□□□ 0.91
CAPN1-206ENST00000526966 HSP90AA2PQ14568 343 aaPredicted RBP20.76■□□□□ 0.91
CAPN1-206ENST00000526966 FAM187BQ17R55 369 aa20.76■□□□□ 0.91
CAPN1-206ENST00000526966 RTP2Q5QGT7 225 aa20.76■□□□□ 0.91
CAPN1-206ENST00000526966 GET4Q7L5D6 327 aaPredicted RBP20.76■□□□□ 0.91
CAPN1-206ENST00000526966 GLYCTKQ8IVS8 523 aa20.76■□□□□ 0.91
CAPN1-206ENST00000526966 RABGGTAQ92696 567 aa20.76■□□□□ 0.91
CAPN1-206ENST00000526966 GTF3C6Q969F1 213 aa20.76■□□□□ 0.91
CAPN1-206ENST00000526966 PAAF1Q9BRP4 392 aa20.76■□□□□ 0.91
CAPN1-206ENST00000526966 FZD8Q9H461 694 aa20.76■□□□□ 0.91
CAPN1-206ENST00000526966 GPRC5CQ9NQ84 441 aa20.76■□□□□ 0.91
CAPN1-206ENST00000526966 PRMT7Q9NVM4 692 aaPredicted RBP20.76■□□□□ 0.91
CAPN1-206ENST00000526966 CACNG4Q9UBN1 327 aa20.76■□□□□ 0.91
CAPN1-206ENST00000526966 PARP2Q9UGN5 583 aa20.76■□□□□ 0.91
CAPN1-206ENST00000526966 FBXW11Q9UKB1 542 aa20.76■□□□□ 0.91
CAPN1-206ENST00000526966 DMXL1Q9Y485 3027 aa20.76■□□□□ 0.91
CAPN1-206ENST00000526966 MIA3Q5JRA6 1907 aa20.76■□□□□ 0.91
CAPN1-206ENST00000526966 OTOGLQ3ZCN5 2332 aa20.75■□□□□ 0.91
CAPN1-206ENST00000526966 POTEMA6NI47 508 aa20.75■□□□□ 0.91
CAPN1-206ENST00000526966 LRRIQ4A6NIV6 560 aa20.75■□□□□ 0.91
CAPN1-206ENST00000526966 BTBD18B2RXH4 712 aa20.75■□□□□ 0.91
CAPN1-206ENST00000526966 LARGE1O95461 756 aa20.75■□□□□ 0.91
CAPN1-206ENST00000526966 SPATA31C1P0DKV0 1188 aa20.75■□□□□ 0.91
CAPN1-206ENST00000526966 ME3Q16798 604 aa20.75■□□□□ 0.91
CAPN1-206ENST00000526966 PRSS55Q6UWB4 352 aaPredicted RBP20.75■□□□□ 0.91
CAPN1-206ENST00000526966 DIS3L2Q8IYB7 885 aaKnown RBP20.75■□□□□ 0.91
CAPN1-206ENST00000526966 ADSSL1Q8N142 457 aa20.75■□□□□ 0.91
CAPN1-206ENST00000526966 GPR152Q8TDT2 470 aa20.75■□□□□ 0.91
CAPN1-206ENST00000526966 TBC1D17Q9HA65 648 aa20.75■□□□□ 0.91
CAPN1-206ENST00000526966 CA14Q9ULX7 337 aa20.75■□□□□ 0.91
CAPN1-206ENST00000526966 NOTCH4Q99466 2003 aa20.75■□□□□ 0.91
CAPN1-206ENST00000526966 FRYLO94915 3013 aa20.74■□□□□ 0.91
CAPN1-206ENST00000526966 A0A087WWV3 80 aa20.74■□□□□ 0.91
CAPN1-206ENST00000526966 PTGESO14684 152 aa20.74■□□□□ 0.91
CAPN1-206ENST00000526966 TADA2AO75478 443 aa20.74■□□□□ 0.91
CAPN1-206ENST00000526966 PHLDB3Q6NSJ2 640 aa20.74■□□□□ 0.91
CAPN1-206ENST00000526966 NECAB1Q8N987 351 aa20.74■□□□□ 0.91
CAPN1-206ENST00000526966 NSUN7Q8NE18 718 aaKnown RBP20.74■□□□□ 0.91
CAPN1-206ENST00000526966 MCPH1Q8NEM0 835 aa20.74■□□□□ 0.91
CAPN1-206ENST00000526966 PIK3R5Q8WYR1 880 aa20.74■□□□□ 0.91
CAPN1-206ENST00000526966 SLC2A4RGQ9NR83 387 aa20.74■□□□□ 0.91
CAPN1-206ENST00000526966 ZFP37Q9Y6Q3 630 aaPredicted RBP20.74■□□□□ 0.91
CAPN1-206ENST00000526966 TTLL13PA6NNM8 815 aa20.73■□□□□ 0.91
CAPN1-206ENST00000526966 KIF4AO95239 1232 aa20.73■□□□□ 0.91
CAPN1-206ENST00000526966 NAB2Q15742 525 aa20.73■□□□□ 0.91
CAPN1-206ENST00000526966 CATSPER3Q86XQ3 398 aa20.73■□□□□ 0.91
CAPN1-206ENST00000526966 ZBTB8OSQ8IWT0 167 aa20.73■□□□□ 0.91
CAPN1-206ENST00000526966 CLSTN3Q9BQT9 956 aa20.73■□□□□ 0.91
CAPN1-206ENST00000526966 TTPALQ9BTX7 342 aa20.73■□□□□ 0.91
CAPN1-206ENST00000526966 TMEM60Q9H2L4 133 aa20.73■□□□□ 0.91
CAPN1-206ENST00000526966 PDZD7Q9H5P4 517 aa20.73■□□□□ 0.91
CAPN1-206ENST00000526966 TUFT1Q9NNX1 390 aa20.73■□□□□ 0.91
CAPN1-206ENST00000526966 ARHGEF3Q9NR81 526 aa20.73■□□□□ 0.91
CAPN1-206ENST00000526966 DLGAP2Q9P1A6 1054 aa20.73■□□□□ 0.91
CAPN1-206ENST00000526966 NUMBLQ9Y6R0 609 aa20.73■□□□□ 0.91
CAPN1-206ENST00000526966 CASTOR2A6NHX0 329 aa20.72■□□□□ 0.91
CAPN1-206ENST00000526966 STK25O00506 426 aa20.72■□□□□ 0.91
CAPN1-206ENST00000526966 N4BP3O15049 544 aa20.72■□□□□ 0.91
CAPN1-206ENST00000526966 HNRNPA1P09651 372 aaKnown RBP eCLIP20.72■□□□□ 0.91
CAPN1-206ENST00000526966 MAEAQ7L5Y9 396 aa20.72■□□□□ 0.91
CAPN1-206ENST00000526966 LNX1Q8TBB1 728 aaPredicted RBP20.72■□□□□ 0.91
CAPN1-206ENST00000526966 HASPINQ8TF76 798 aa20.72■□□□□ 0.91
CAPN1-206ENST00000526966 SEMA4AQ9H3S1 761 aa20.72■□□□□ 0.91
CAPN1-206ENST00000526966 MED24O75448 989 aa20.71■□□□□ 0.91
CAPN1-206ENST00000526966 RECQL4O94761 1208 aa20.71■□□□□ 0.91
CAPN1-206ENST00000526966 ATP2B1P20020 1258 aa20.71■□□□□ 0.91
CAPN1-206ENST00000526966 RFX1P22670 979 aa20.71■□□□□ 0.91
CAPN1-206ENST00000526966 FSHRP23945 695 aa20.71■□□□□ 0.91
CAPN1-206ENST00000526966 HOXA9P31269 272 aa20.71■□□□□ 0.91
CAPN1-206ENST00000526966 PSMD5Q16401 504 aa20.71■□□□□ 0.91
CAPN1-206ENST00000526966 FAM171A1Q5VUB5 890 aa20.71■□□□□ 0.91
CAPN1-206ENST00000526966 BSNDQ8WZ55 320 aa20.71■□□□□ 0.91
CAPN1-206ENST00000526966 POLR3CQ9BUI4 534 aaPredicted RBP20.71■□□□□ 0.91
CAPN1-206ENST00000526966 CCDC113Q9H0I3 377 aa20.71■□□□□ 0.91
CAPN1-206ENST00000526966 C2orf40Q9H1Z8 148 aa20.71■□□□□ 0.91
CAPN1-206ENST00000526966 CXCL16Q9H2A7 254 aa20.71■□□□□ 0.91
CAPN1-206ENST00000526966 SNTG2Q9NY99 539 aa20.71■□□□□ 0.91
CAPN1-206ENST00000526966 PATJQ8NI35 1801 aa20.71■□□□□ 0.91
CAPN1-206ENST00000526966 JAK2O60674 1132 aa20.7■□□□□ 0.9
CAPN1-206ENST00000526966 EDN1P05305 212 aa20.7■□□□□ 0.9
CAPN1-206ENST00000526966 THP07101 528 aa20.7■□□□□ 0.9
CAPN1-206ENST00000526966 ELAVL2Q12926 359 aaKnown RBP20.7■□□□□ 0.9
CAPN1-206ENST00000526966 PRPF4BQ13523 1007 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms