RNA–Protein interactions for RNA: ENST00000526825.5

LTBP3-206, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 1,002 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-206ENST00000526825 GRIK3Q13003 919 aa16.64■□□□□ 0.25
LTBP3-206ENST00000526825 FAM187BQ17R55 369 aa16.64■□□□□ 0.25
LTBP3-206ENST00000526825 MAEAQ7L5Y9 396 aa16.64■□□□□ 0.25
LTBP3-206ENST00000526825 FLCNQ8NFG4 579 aa16.64■□□□□ 0.25
LTBP3-206ENST00000526825 RSAD2Q8WXG1 361 aa16.64■□□□□ 0.25
LTBP3-206ENST00000526825 SMG7Q92540 1137 aaKnown RBP16.64■□□□□ 0.25
LTBP3-206ENST00000526825 RABGGTAQ92696 567 aa16.64■□□□□ 0.25
LTBP3-206ENST00000526825 PRIMPOLQ96LW4 560 aa16.64■□□□□ 0.25
LTBP3-206ENST00000526825 CCDC43Q96MW1 224 aaKnown RBP16.64■□□□□ 0.25
LTBP3-206ENST00000526825 MYADMQ96S97 322 aa16.64■□□□□ 0.25
LTBP3-206ENST00000526825 PAAF1Q9BRP4 392 aa16.64■□□□□ 0.25
LTBP3-206ENST00000526825 POLR3CQ9BUI4 534 aaPredicted RBP16.64■□□□□ 0.25
LTBP3-206ENST00000526825 TUFT1Q9NNX1 390 aa16.64■□□□□ 0.25
LTBP3-206ENST00000526825 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.64■□□□□ 0.25
LTBP3-206ENST00000526825 PRMT7Q9NVM4 692 aaPredicted RBP16.64■□□□□ 0.25
LTBP3-206ENST00000526825 PLXNA3P51805 1871 aa16.64■□□□□ 0.25
LTBP3-206ENST00000526825 DOCK8Q8NF50 2099 aa16.64■□□□□ 0.25
LTBP3-206ENST00000526825 ZMYM2Q9UBW7 1377 aa16.64■□□□□ 0.25
LTBP3-206ENST00000526825 NARSO43776 548 aaKnown RBP16.63■□□□□ 0.25
LTBP3-206ENST00000526825 TADA2AO75478 443 aa16.63■□□□□ 0.25
LTBP3-206ENST00000526825 GBP2P32456 591 aaPredicted RBP16.63■□□□□ 0.25
LTBP3-206ENST00000526825 CDCA2Q69YH5 1023 aaPredicted RBP16.63■□□□□ 0.25
LTBP3-206ENST00000526825 ELMSAN1Q6PJG2 1045 aa16.63■□□□□ 0.25
LTBP3-206ENST00000526825 ASCL5Q7RTU5 278 aa16.63■□□□□ 0.25
LTBP3-206ENST00000526825 SLC44A3Q8N4M1 653 aa16.63■□□□□ 0.25
LTBP3-206ENST00000526825 MCPH1Q8NEM0 835 aa16.63■□□□□ 0.25
LTBP3-206ENST00000526825 FBXO18Q8NFZ0 1043 aa16.63■□□□□ 0.25
LTBP3-206ENST00000526825 RIN2Q8WYP3 895 aaPredicted RBP16.63■□□□□ 0.25
LTBP3-206ENST00000526825 STAMQ92783 540 aa16.63■□□□□ 0.25
LTBP3-206ENST00000526825 NACC1Q96RE7 527 aa16.63■□□□□ 0.25
LTBP3-206ENST00000526825 PRKD2Q9BZL6 878 aa16.63■□□□□ 0.25
LTBP3-206ENST00000526825 CACNG4Q9UBN1 327 aa16.63■□□□□ 0.25
LTBP3-206ENST00000526825 WNT16Q9UBV4 365 aa16.63■□□□□ 0.25
LTBP3-206ENST00000526825 CLUHO75153 1309 aa16.63■□□□□ 0.25
LTBP3-206ENST00000526825 DOCK6Q96HP0 2047 aa16.62■□□□□ 0.25
LTBP3-206ENST00000526825 LRRIQ4A6NIV6 560 aa16.62■□□□□ 0.25
LTBP3-206ENST00000526825 RPL17P18621 184 aaKnown RBP16.62■□□□□ 0.25
LTBP3-206ENST00000526825 HMGN5P82970 282 aaKnown RBP16.62■□□□□ 0.25
LTBP3-206ENST00000526825 TUSC3Q13454 348 aa16.62■□□□□ 0.25
LTBP3-206ENST00000526825 HSP90AA2PQ14568 343 aaPredicted RBP16.62■□□□□ 0.25
LTBP3-206ENST00000526825 SAFBQ15424 915 aaKnown RBP eCLIP16.62■□□□□ 0.25
LTBP3-206ENST00000526825 NAB2Q15742 525 aa16.62■□□□□ 0.25
LTBP3-206ENST00000526825 FAM184AQ8NB25 1140 aa16.62■□□□□ 0.25
LTBP3-206ENST00000526825 BSNDQ8WZ55 320 aa16.62■□□□□ 0.25
LTBP3-206ENST00000526825 NXPE3Q969Y0 559 aa16.62■□□□□ 0.25
LTBP3-206ENST00000526825 TMX3Q96JJ7 454 aa16.62■□□□□ 0.25
LTBP3-206ENST00000526825 TBC1D32Q96NH3 1257 aa16.62■□□□□ 0.25
LTBP3-206ENST00000526825 CXCL16Q9H2A7 254 aa16.62■□□□□ 0.25
LTBP3-206ENST00000526825 ZDHHC7Q9NXF8 308 aa16.62■□□□□ 0.25
LTBP3-206ENST00000526825 SNTG2Q9NY99 539 aa16.62■□□□□ 0.25
LTBP3-206ENST00000526825 VPS13AQ96RL7 3174 aa16.62■□□□□ 0.25
LTBP3-206ENST00000526825 SPTBN4Q9H254 2564 aa16.62■□□□□ 0.25
LTBP3-206ENST00000526825 PTGESO14684 152 aa16.61■□□□□ 0.25
LTBP3-206ENST00000526825 LAMP2P13473 410 aa16.61■□□□□ 0.25
LTBP3-206ENST00000526825 CYP11B2P19099 503 aa16.61■□□□□ 0.25
LTBP3-206ENST00000526825 RPA1P27694 616 aa16.61■□□□□ 0.25
LTBP3-206ENST00000526825 RTP2Q5QGT7 225 aa16.61■□□□□ 0.25
LTBP3-206ENST00000526825 PRSS55Q6UWB4 352 aaPredicted RBP16.61■□□□□ 0.25
LTBP3-206ENST00000526825 GLYCTKQ8IVS8 523 aa16.61■□□□□ 0.25
LTBP3-206ENST00000526825 SIX5Q8N196 739 aa16.61■□□□□ 0.25
LTBP3-206ENST00000526825 LNX1Q8TBB1 728 aaPredicted RBP16.61■□□□□ 0.25
LTBP3-206ENST00000526825 RTP3Q9BQQ7 232 aa16.61■□□□□ 0.25
LTBP3-206ENST00000526825 CLSTN3Q9BQT9 956 aa16.61■□□□□ 0.25
LTBP3-206ENST00000526825 FOXP1Q9H334 677 aaPredicted RBP16.61■□□□□ 0.25
LTBP3-206ENST00000526825 PDZD7Q9H5P4 517 aa16.61■□□□□ 0.25
LTBP3-206ENST00000526825 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.61■□□□□ 0.25
LTBP3-206ENST00000526825 FBXL21Q9UKT6 434 aa16.61■□□□□ 0.25
LTBP3-206ENST00000526825 USP20Q9Y2K6 914 aa16.61■□□□□ 0.25
LTBP3-206ENST00000526825 KRBA1A5PL33 1030 aa16.6■□□□□ 0.25
LTBP3-206ENST00000526825 ACKR2O00590 384 aa16.6■□□□□ 0.25
LTBP3-206ENST00000526825 ZMYND10O75800 440 aa16.6■□□□□ 0.25
LTBP3-206ENST00000526825 EDN1P05305 212 aa16.6■□□□□ 0.25
LTBP3-206ENST00000526825 TOB1P50616 345 aaPredicted RBP16.6■□□□□ 0.25
LTBP3-206ENST00000526825 TTC38Q5R3I4 469 aa16.6■□□□□ 0.25
LTBP3-206ENST00000526825 PADI6Q6TGC4 694 aa16.6■□□□□ 0.25
LTBP3-206ENST00000526825 NOSTRINQ8IVI9 506 aa16.6■□□□□ 0.25
LTBP3-206ENST00000526825 ZBTB8OSQ8IWT0 167 aa16.6■□□□□ 0.25
LTBP3-206ENST00000526825 CCDC105Q8IYK2 499 aa16.6■□□□□ 0.25
LTBP3-206ENST00000526825 CCDC113Q9H0I3 377 aa16.6■□□□□ 0.25
LTBP3-206ENST00000526825 C2orf40Q9H1Z8 148 aa16.6■□□□□ 0.25
LTBP3-206ENST00000526825 PIDD1Q9HB75 910 aa16.6■□□□□ 0.25
LTBP3-206ENST00000526825 PRR23AA6NEV1 266 aa16.59■□□□□ 0.25
LTBP3-206ENST00000526825 CASTOR2A6NHX0 329 aa16.59■□□□□ 0.25
LTBP3-206ENST00000526825 ANHXE9PGG2 379 aa16.59■□□□□ 0.25
LTBP3-206ENST00000526825 N4BP3O15049 544 aa16.59■□□□□ 0.25
LTBP3-206ENST00000526825 THP07101 528 aa16.59■□□□□ 0.25
LTBP3-206ENST00000526825 CFHP08603 1231 aa16.59■□□□□ 0.25
LTBP3-206ENST00000526825 CREMQ03060 361 aa16.59■□□□□ 0.25
LTBP3-206ENST00000526825 PRPF4BQ13523 1007 aaKnown RBP16.59■□□□□ 0.25
LTBP3-206ENST00000526825 MAPK6Q16659 721 aa16.59■□□□□ 0.25
LTBP3-206ENST00000526825 EEF1DP3Q658K8 133 aa16.59■□□□□ 0.25
LTBP3-206ENST00000526825 C4orf32Q8N8J7 132 aa16.59■□□□□ 0.25
LTBP3-206ENST00000526825 DTWD2Q8NBA8 298 aa16.59■□□□□ 0.25
LTBP3-206ENST00000526825 PIK3R5Q8WYR1 880 aa16.59■□□□□ 0.25
LTBP3-206ENST00000526825 TTPALQ9BTX7 342 aa16.59■□□□□ 0.25
LTBP3-206ENST00000526825 SF3B1O75533 1304 aaKnown RBP eCLIP16.59■□□□□ 0.25
LTBP3-206ENST00000526825 RECQL4O94761 1208 aa16.58■□□□□ 0.24
LTBP3-206ENST00000526825 KIF4AO95239 1232 aa16.58■□□□□ 0.24
LTBP3-206ENST00000526825 PRKCBP05771 671 aa16.58■□□□□ 0.24
LTBP3-206ENST00000526825 OR52Z1P0C646 297 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms