RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 ATG2AQ2TAZ0 1938 aa17.76■□□□□ 0.43
SSSCA1-202ENST00000526433 FRMD3A2A2Y4 597 aa17.76■□□□□ 0.43
SSSCA1-202ENST00000526433 NRP1O14786 923 aa17.76■□□□□ 0.43
SSSCA1-202ENST00000526433 CLDN3O15551 220 aa17.76■□□□□ 0.43
SSSCA1-202ENST00000526433 HARSP12081 509 aaKnown RBP17.76■□□□□ 0.43
SSSCA1-202ENST00000526433 PFKFB1P16118 471 aa17.76■□□□□ 0.43
SSSCA1-202ENST00000526433 ANP32AP39687 249 aaKnown RBP17.76■□□□□ 0.43
SSSCA1-202ENST00000526433 MATR3P43243 847 aaKnown RBP eCLIP17.76■□□□□ 0.43
SSSCA1-202ENST00000526433 LIG4P49917 911 aa17.76■□□□□ 0.43
SSSCA1-202ENST00000526433 OSTNP61366 133 aa17.76■□□□□ 0.43
SSSCA1-202ENST00000526433 DSC1Q08554 894 aa17.76■□□□□ 0.43
SSSCA1-202ENST00000526433 TMEM173Q86WV6 379 aaPredicted RBP17.76■□□□□ 0.43
SSSCA1-202ENST00000526433 CCDC65Q8IXS2 484 aa17.76■□□□□ 0.43
SSSCA1-202ENST00000526433 TMEM169Q96HH4 297 aa17.76■□□□□ 0.43
SSSCA1-202ENST00000526433 C7orf25Q9BPX7 421 aa17.76■□□□□ 0.43
SSSCA1-202ENST00000526433 CCDC94Q9BW85 323 aaPredicted RBP17.76■□□□□ 0.43
SSSCA1-202ENST00000526433 TRIM9Q9C026 710 aa17.76■□□□□ 0.43
SSSCA1-202ENST00000526433 MAGEF1Q9HAY2 307 aa17.76■□□□□ 0.43
SSSCA1-202ENST00000526433 TLR9Q9NR96 1032 aa17.76■□□□□ 0.43
SSSCA1-202ENST00000526433 ANKFY1Q9P2R3 1169 aa17.76■□□□□ 0.43
SSSCA1-202ENST00000526433 PTGESO14684 152 aa17.75■□□□□ 0.43
SSSCA1-202ENST00000526433 PIGRP01833 764 aa17.75■□□□□ 0.43
SSSCA1-202ENST00000526433 SLFN14P0C7P3 912 aa17.75■□□□□ 0.43
SSSCA1-202ENST00000526433 AFMP43652 599 aa17.75■□□□□ 0.43
SSSCA1-202ENST00000526433 OR1G1P47890 313 aa17.75■□□□□ 0.43
SSSCA1-202ENST00000526433 MCL1Q07820 350 aa17.75■□□□□ 0.43
SSSCA1-202ENST00000526433 GRIK3Q13003 919 aa17.75■□□□□ 0.43
SSSCA1-202ENST00000526433 CNNM4Q6P4Q7 775 aa17.75■□□□□ 0.43
SSSCA1-202ENST00000526433 CEP57L1Q8IYX8 460 aa17.75■□□□□ 0.43
SSSCA1-202ENST00000526433 BCL7CQ8WUZ0 217 aaPredicted RBP17.75■□□□□ 0.43
SSSCA1-202ENST00000526433 ACAP3Q96P50 834 aa17.75■□□□□ 0.43
SSSCA1-202ENST00000526433 STRA6Q9BX79 667 aa17.75■□□□□ 0.43
SSSCA1-202ENST00000526433 HAPLN2Q9GZV7 340 aa17.75■□□□□ 0.43
SSSCA1-202ENST00000526433 OLFML3Q9NRN5 406 aa17.75■□□□□ 0.43
SSSCA1-202ENST00000526433 CIZ1Q9ULV3 898 aaPredicted RBP17.75■□□□□ 0.43
SSSCA1-202ENST00000526433 HPSEQ9Y251 543 aa17.75■□□□□ 0.43
SSSCA1-202ENST00000526433 PCDHGC5Q9Y5F6 944 aa17.75■□□□□ 0.43
SSSCA1-202ENST00000526433 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 FAM237AA0A1B0GTK4 181 aa17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 A0A1W2PQ27 194 aa17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 A0A1W2PQ64 194 aa17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 A0A1W2PQD8 194 aa17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 ANKRD63C9JTQ0 380 aa17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 FSCN2O14926 492 aa17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 HNRNPDLO14979 420 aaKnown RBP17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 NR1I2O75469 434 aa17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 PPP1R37O75864 691 aa17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 THP07101 528 aa17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 CASP1P29466 404 aa17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 YARSP54577 528 aaKnown RBP17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 ASIC1P78348 528 aa17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 NOLC1Q14978 699 aaKnown RBP eCLIP17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 SEZ6Q53EL9 994 aa17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 PDE12Q6L8Q7 609 aaKnown RBP17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 ALKAL1Q6UXT8 129 aa17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 TMC7Q7Z402 723 aa17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 DDX53Q86TM3 631 aaKnown RBP17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 MAP4K3Q8IVH8 894 aa17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 FSIP1Q8NA03 581 aa17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 HVCN1Q96D96 273 aa17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 COLEC11Q9BWP8 271 aa17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 BLZF1Q9H2G9 400 aa17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 USP25Q9UHP3 1055 aa17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 PRG3Q9Y2Y8 225 aaPredicted RBP17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 PCDHB13Q9Y5F0 798 aa17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 CITO14578 2027 aa17.74■□□□□ 0.43
SSSCA1-202ENST00000526433 ACTN4O43707 911 aaKnown RBP17.73■□□□□ 0.43
SSSCA1-202ENST00000526433 GCNT3O95395 438 aa17.73■□□□□ 0.43
SSSCA1-202ENST00000526433 SYKP43405 635 aa17.73■□□□□ 0.43
SSSCA1-202ENST00000526433 NDUFA8P51970 172 aa17.73■□□□□ 0.43
SSSCA1-202ENST00000526433 HYAL1Q12794 435 aa17.73■□□□□ 0.43
SSSCA1-202ENST00000526433 COASYQ13057 564 aa17.73■□□□□ 0.43
SSSCA1-202ENST00000526433 XKR4Q5GH76 650 aa17.73■□□□□ 0.43
SSSCA1-202ENST00000526433 SLC39A4Q6P5W5 647 aa17.73■□□□□ 0.43
SSSCA1-202ENST00000526433 ADGRD2Q7Z7M1 963 aa17.73■□□□□ 0.43
SSSCA1-202ENST00000526433 GRAMD1CQ8IYS0 662 aa17.73■□□□□ 0.43
SSSCA1-202ENST00000526433 VPS52Q8N1B4 723 aa17.73■□□□□ 0.43
SSSCA1-202ENST00000526433 HLA-CQ95604 372 aa17.73■□□□□ 0.43
SSSCA1-202ENST00000526433 PAGE5Q96GU1 130 aa17.73■□□□□ 0.43
SSSCA1-202ENST00000526433 TCF25Q9BQ70 676 aa17.73■□□□□ 0.43
SSSCA1-202ENST00000526433 IGFLR1Q9H665 355 aa17.73■□□□□ 0.43
SSSCA1-202ENST00000526433 NGRNQ9NPE2 291 aaKnown RBP17.73■□□□□ 0.43
SSSCA1-202ENST00000526433 TOPORSQ9NS56 1045 aaPredicted RBP17.73■□□□□ 0.43
SSSCA1-202ENST00000526433 COG5Q9UP83 839 aa17.73■□□□□ 0.43
SSSCA1-202ENST00000526433 A0A0B4J269 797 aa17.72■□□□□ 0.43
SSSCA1-202ENST00000526433 SMIM28A0A1B0GU29 152 aa17.72■□□□□ 0.43
SSSCA1-202ENST00000526433 NCK2O43639 380 aa17.72■□□□□ 0.43
SSSCA1-202ENST00000526433 CXCL14O95715 111 aa17.72■□□□□ 0.43
SSSCA1-202ENST00000526433 MYBP10242 640 aa17.72■□□□□ 0.43
SSSCA1-202ENST00000526433 GTF2F1P35269 517 aaKnown RBP eCLIP17.72■□□□□ 0.43
SSSCA1-202ENST00000526433 CASP5P51878 434 aa17.72■□□□□ 0.43
SSSCA1-202ENST00000526433 KCNA1Q09470 495 aa17.72■□□□□ 0.43
SSSCA1-202ENST00000526433 TUSC3Q13454 348 aa17.72■□□□□ 0.43
SSSCA1-202ENST00000526433 CUL4BQ13620 913 aa17.72■□□□□ 0.43
SSSCA1-202ENST00000526433 NAB2Q15742 525 aa17.72■□□□□ 0.43
SSSCA1-202ENST00000526433 L1TD1Q5T7N2 865 aaKnown RBP17.72■□□□□ 0.43
SSSCA1-202ENST00000526433 PLPP4Q5VZY2 271 aa17.72■□□□□ 0.43
SSSCA1-202ENST00000526433 RBM23Q86U06 439 aaKnown RBP17.72■□□□□ 0.43
SSSCA1-202ENST00000526433 RABGGTAQ92696 567 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms