RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 LRRC15Q8TF66 581 aa12.28□□□□□ -0.44
TRAPPC4-204ENST00000524797 CALML4Q96GE6 196 aa12.28□□□□□ -0.44
TRAPPC4-204ENST00000524797 ACO2Q99798 780 aaKnown RBP12.28□□□□□ -0.44
TRAPPC4-204ENST00000524797 PHF7Q9BWX1 381 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC4-204ENST00000524797 EMILIN2Q9BXX0 1053 aa12.28□□□□□ -0.44
TRAPPC4-204ENST00000524797 DZANK1Q9NVP4 752 aa12.28□□□□□ -0.44
TRAPPC4-204ENST00000524797 GDAQ9Y2T3 454 aa12.28□□□□□ -0.44
TRAPPC4-204ENST00000524797 URODP06132 367 aa12.27□□□□□ -0.44
TRAPPC4-204ENST00000524797 PLS3P13797 630 aa12.27□□□□□ -0.44
TRAPPC4-204ENST00000524797 TUSC3Q13454 348 aa12.27□□□□□ -0.44
TRAPPC4-204ENST00000524797 ARSHQ5FYA8 562 aa12.27□□□□□ -0.44
TRAPPC4-204ENST00000524797 PPFIBP1Q86W92 1011 aa12.27□□□□□ -0.44
TRAPPC4-204ENST00000524797 SPIRE2Q8WWL2 714 aa12.27□□□□□ -0.44
TRAPPC4-204ENST00000524797 MRPL4Q9BYD3 311 aaKnown RBP12.27□□□□□ -0.44
TRAPPC4-204ENST00000524797 CDT1Q9H211 546 aa12.27□□□□□ -0.44
TRAPPC4-204ENST00000524797 MRPL17Q9NRX2 175 aaKnown RBP12.27□□□□□ -0.44
TRAPPC4-204ENST00000524797 BLOC1S4Q9NUP1 217 aa12.27□□□□□ -0.44
TRAPPC4-204ENST00000524797 KCND2Q9NZV8 630 aa12.27□□□□□ -0.44
TRAPPC4-204ENST00000524797 CACNG4Q9UBN1 327 aa12.27□□□□□ -0.44
TRAPPC4-204ENST00000524797 MTMR6Q9Y217 621 aa12.27□□□□□ -0.44
TRAPPC4-204ENST00000524797 DCXO43602 365 aa12.27□□□□□ -0.45
TRAPPC4-204ENST00000524797 CNPP09543 421 aaKnown RBP12.27□□□□□ -0.45
TRAPPC4-204ENST00000524797 ALADP13716 330 aa12.27□□□□□ -0.45
TRAPPC4-204ENST00000524797 GLUD2P49448 558 aa12.27□□□□□ -0.45
TRAPPC4-204ENST00000524797 HSP90AA2PQ14568 343 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC4-204ENST00000524797 CBX2Q14781 532 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC4-204ENST00000524797 NAB2Q15742 525 aa12.27□□□□□ -0.45
TRAPPC4-204ENST00000524797 RARS2Q5T160 578 aaKnown RBP12.27□□□□□ -0.45
TRAPPC4-204ENST00000524797 KIAA0319Q5VV43 1072 aa12.27□□□□□ -0.45
TRAPPC4-204ENST00000524797 FUT10Q6P4F1 479 aa12.27□□□□□ -0.45
TRAPPC4-204ENST00000524797 FAM173BQ6P4H8 233 aa12.27□□□□□ -0.45
TRAPPC4-204ENST00000524797 RABGGTAQ92696 567 aa12.27□□□□□ -0.45
TRAPPC4-204ENST00000524797 SNX21Q969T3 373 aa12.27□□□□□ -0.45
TRAPPC4-204ENST00000524797 NTPCRQ9BSD7 190 aaKnown RBP12.27□□□□□ -0.45
TRAPPC4-204ENST00000524797 TARS2Q9BW92 718 aaKnown RBP12.27□□□□□ -0.45
TRAPPC4-204ENST00000524797 PTPRHQ9HD43 1115 aa12.27□□□□□ -0.45
TRAPPC4-204ENST00000524797 C11orf16Q9NQ32 467 aa12.27□□□□□ -0.45
TRAPPC4-204ENST00000524797 SSX2IPQ9Y2D8 614 aa12.27□□□□□ -0.45
TRAPPC4-204ENST00000524797 FAM86C2PA6NEL3 165 aa12.26□□□□□ -0.45
TRAPPC4-204ENST00000524797 CASTOR2A6NHX0 329 aa12.26□□□□□ -0.45
TRAPPC4-204ENST00000524797 C2CD2LO14523 706 aa12.26□□□□□ -0.45
TRAPPC4-204ENST00000524797 THP07101 528 aa12.26□□□□□ -0.45
TRAPPC4-204ENST00000524797 MAPTP10636 758 aaKnown RBP12.26□□□□□ -0.45
TRAPPC4-204ENST00000524797 PLCG1P19174 1290 aa12.26□□□□□ -0.45
TRAPPC4-204ENST00000524797 KLRC2P26717 231 aa12.26□□□□□ -0.45
TRAPPC4-204ENST00000524797 GRM5P41594 1212 aa12.26□□□□□ -0.45
TRAPPC4-204ENST00000524797 DSG1Q02413 1049 aa12.26□□□□□ -0.45
TRAPPC4-204ENST00000524797 CACNB1Q02641 598 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC4-204ENST00000524797 KARSQ15046 597 aaKnown RBP12.26□□□□□ -0.45
TRAPPC4-204ENST00000524797 ZNF568Q3ZCX4 644 aa12.26□□□□□ -0.45
TRAPPC4-204ENST00000524797 GPBP1Q86WP2 473 aa12.26□□□□□ -0.45
TRAPPC4-204ENST00000524797 RNF135Q8IUD6 432 aa12.26□□□□□ -0.45
TRAPPC4-204ENST00000524797 C12orf76Q8N812 135 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC4-204ENST00000524797 TMEM161BQ8NDZ6 487 aa12.26□□□□□ -0.45
TRAPPC4-204ENST00000524797 RAD54LQ92698 747 aa12.26□□□□□ -0.45
TRAPPC4-204ENST00000524797 PAAF1Q9BRP4 392 aa12.26□□□□□ -0.45
TRAPPC4-204ENST00000524797 GPR62Q9BZJ7 368 aa12.26□□□□□ -0.45
TRAPPC4-204ENST00000524797 CCSER1Q9C0I3 900 aa12.26□□□□□ -0.45
TRAPPC4-204ENST00000524797 ADAM7Q9H2U9 754 aa12.26□□□□□ -0.45
TRAPPC4-204ENST00000524797 RXFP1Q9HBX9 757 aa12.26□□□□□ -0.45
TRAPPC4-204ENST00000524797 KCNG1Q9UIX4 513 aa12.26□□□□□ -0.45
TRAPPC4-204ENST00000524797 CDH22Q9UJ99 828 aa12.26□□□□□ -0.45
TRAPPC4-204ENST00000524797 FBXO2Q9UK22 296 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC4-204ENST00000524797 ADAM28Q9UKQ2 775 aa12.26□□□□□ -0.45
TRAPPC4-204ENST00000524797 ABLIM1O14639 778 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 GPR37L1O60883 481 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 MCF2P10911 925 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 PROZP22891 400 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 MTHFRP42898 656 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 CLCN4P51793 760 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 ITIH3Q06033 890 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 DHX8Q14562 1220 aaKnown RBP12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 MCM6Q14566 821 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 TMEM31Q5JXX7 168 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 CES5AQ6NT32 575 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 ZBTB33Q86T24 672 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 CEP120Q8N960 986 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 RPGRIP1Q96KN7 1286 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 FBXL18Q96ME1 805 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 LRFN3Q9BTN0 628 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 CCDC94Q9BW85 323 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 CHST7Q9NS84 486 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 VCANP13611 3396 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 XIRP2A4UGR9 3374 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 TADA2AO75478 443 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 BRD1O95696 1058 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 MARCKSP29966 332 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 SMTNP53814 917 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 NCKAP1LP55160 1127 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 STRN3Q13033 797 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 USP41Q3LFD5 358 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 KANK3Q6NY19 840 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 MPZL3Q6UWV2 235 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 GPR65Q8IYL9 337 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 RASSF8Q8NHQ8 419 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 ZBTB45Q96K62 511 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 B3GALT6Q96L58 329 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 NECTIN4Q96NY8 510 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 PPP1R10Q96QC0 940 aaKnown RBP12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 REEP2Q9BRK0 252 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms