RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 FOXQ1Q9C009 403 aa28.76■■■□□ 2.19
PVT1-219ENST00000523427 FNIP2Q9P278 1114 aa28.76■■■□□ 2.19
PVT1-219ENST00000523427 ORC3Q9UBD5 711 aaPredicted RBP28.76■■■□□ 2.19
PVT1-219ENST00000523427 POLIQ9UNA4 740 aa28.76■■■□□ 2.19
PVT1-219ENST00000523427 DOCK8Q8NF50 2099 aa28.76■■■□□ 2.19
PVT1-219ENST00000523427 CASTOR2A6NHX0 329 aa28.75■■■□□ 2.19
PVT1-219ENST00000523427 LRRIQ4A6NIV6 560 aa28.75■■■□□ 2.19
PVT1-219ENST00000523427 USO1O60763 962 aaKnown RBP28.75■■■□□ 2.19
PVT1-219ENST00000523427 ZMYND10O75800 440 aa28.75■■■□□ 2.19
PVT1-219ENST00000523427 KIAA2013Q8IYS2 634 aa28.75■■■□□ 2.19
PVT1-219ENST00000523427 GPRC5CQ9NQ84 441 aa28.75■■■□□ 2.19
PVT1-219ENST00000523427 ANKEF1Q9NU02 776 aa28.75■■■□□ 2.19
PVT1-219ENST00000523427 ARID2Q68CP9 1835 aa28.74■■■□□ 2.19
PVT1-219ENST00000523427 TXKP42681 527 aa28.74■■■□□ 2.19
PVT1-219ENST00000523427 FOSBP53539 338 aa28.74■■■□□ 2.19
PVT1-219ENST00000523427 POU5F1BQ06416 359 aa28.74■■■□□ 2.19
PVT1-219ENST00000523427 HSP90AA2PQ14568 343 aaPredicted RBP28.74■■■□□ 2.19
PVT1-219ENST00000523427 CALCRLQ16602 461 aa28.74■■■□□ 2.19
PVT1-219ENST00000523427 TMEM132AQ24JP5 1023 aa28.74■■■□□ 2.19
PVT1-219ENST00000523427 FAM171A1Q5VUB5 890 aa28.74■■■□□ 2.19
PVT1-219ENST00000523427 HSD17B14Q9BPX1 270 aa28.74■■■□□ 2.19
PVT1-219ENST00000523427 TPCN1Q9ULQ1 816 aa28.74■■■□□ 2.19
PVT1-219ENST00000523427 STK36Q9NRP7 1315 aa28.73■■■□□ 2.19
PVT1-219ENST00000523427 ANHXE9PGG2 379 aa28.73■■■□□ 2.19
PVT1-219ENST00000523427 LRRN2O75325 713 aa28.73■■■□□ 2.19
PVT1-219ENST00000523427 KRT2P35908 639 aa28.73■■■□□ 2.19
PVT1-219ENST00000523427 CREMQ03060 361 aa28.73■■■□□ 2.19
PVT1-219ENST00000523427 TTC12Q9H892 705 aaPredicted RBP28.73■■■□□ 2.19
PVT1-219ENST00000523427 ZNF292O60281 2723 aa28.72■■■□□ 2.19
PVT1-219ENST00000523427 SF3B1O75533 1304 aaKnown RBP eCLIP28.72■■■□□ 2.197e-6■■■■■ 104.3
PVT1-219ENST00000523427 A0A1B0GUA9 196 aa28.72■■■□□ 2.19
PVT1-219ENST00000523427 RARRES1P49788 294 aa28.72■■■□□ 2.19
PVT1-219ENST00000523427 GPC5P78333 572 aa28.72■■■□□ 2.19
PVT1-219ENST00000523427 LIN9Q5TKA1 542 aa28.72■■■□□ 2.19
PVT1-219ENST00000523427 PHLDB3Q6NSJ2 640 aa28.72■■■□□ 2.19
PVT1-219ENST00000523427 PARM1Q6UWI2 310 aa28.72■■■□□ 2.19
PVT1-219ENST00000523427 FGF14Q92915 247 aa28.72■■■□□ 2.19
PVT1-219ENST00000523427 SEMA4AQ9H3S1 761 aa28.72■■■□□ 2.19
PVT1-219ENST00000523427 CCL16O15467 120 aa28.71■■■□□ 2.19
PVT1-219ENST00000523427 PFKFB2O60825 505 aa28.71■■■□□ 2.19
PVT1-219ENST00000523427 LYPLA2O95372 231 aa28.71■■■□□ 2.19
PVT1-219ENST00000523427 CTDNEP1O95476 244 aa28.71■■■□□ 2.19
PVT1-219ENST00000523427 SP9P0CG40 484 aa28.71■■■□□ 2.19
PVT1-219ENST00000523427 LIG1P18858 919 aa28.71■■■□□ 2.19
PVT1-219ENST00000523427 SNW1Q13573 536 aaKnown RBP28.71■■■□□ 2.19
PVT1-219ENST00000523427 PPM1LQ5SGD2 360 aa28.71■■■□□ 2.19
PVT1-219ENST00000523427 C1orf210Q8IVY1 113 aa28.71■■■□□ 2.19
PVT1-219ENST00000523427 TTPALQ9BTX7 342 aa28.71■■■□□ 2.19
PVT1-219ENST00000523427 BRMS1Q9HCU9 246 aa28.71■■■□□ 2.19
PVT1-219ENST00000523427 DOCK6Q96HP0 2047 aa28.7■■■□□ 2.19
PVT1-219ENST00000523427 POTEMA6NI47 508 aa28.7■■■□□ 2.18
PVT1-219ENST00000523427 KIF4AO95239 1232 aa28.7■■■□□ 2.18
PVT1-219ENST00000523427 TUSC3Q13454 348 aa28.7■■■□□ 2.18
PVT1-219ENST00000523427 PSMD5Q16401 504 aa28.7■■■□□ 2.18
PVT1-219ENST00000523427 GPR65Q8IYL9 337 aa28.7■■■□□ 2.18
PVT1-219ENST00000523427 RMDN1Q96DB5 314 aa28.7■■■□□ 2.18
PVT1-219ENST00000523427 CLSTN3Q9BQT9 956 aa28.7■■■□□ 2.18
PVT1-219ENST00000523427 NFKBIZQ9BYH8 718 aa28.7■■■□□ 2.18
PVT1-219ENST00000523427 CXCL16Q9H2A7 254 aa28.7■■■□□ 2.18
PVT1-219ENST00000523427 SLC2A4RGQ9NR83 387 aa28.7■■■□□ 2.18
PVT1-219ENST00000523427 SNTG2Q9NY99 539 aa28.7■■■□□ 2.18
PVT1-219ENST00000523427 FBXW11Q9UKB1 542 aa28.7■■■□□ 2.18
PVT1-219ENST00000523427 USP20Q9Y2K6 914 aa28.7■■■□□ 2.18
PVT1-219ENST00000523427 MTCL1Q9Y4B5 1905 aaKnown RBP28.7■■■□□ 2.18
PVT1-219ENST00000523427 C1RP00736 705 aa28.69■■■□□ 2.18
PVT1-219ENST00000523427 C8AP07357 584 aa28.69■■■□□ 2.18
PVT1-219ENST00000523427 GLULP15104 373 aa28.69■■■□□ 2.18
PVT1-219ENST00000523427 WASF1Q92558 559 aa28.69■■■□□ 2.18
PVT1-219ENST00000523427 DLGAP2Q9P1A6 1054 aa28.69■■■□□ 2.18
PVT1-219ENST00000523427 CDH7Q9ULB5 785 aa28.69■■■□□ 2.18
PVT1-219ENST00000523427 TTLL13PA6NNM8 815 aa28.68■■■□□ 2.18
PVT1-219ENST00000523427 WNT7AO00755 349 aa28.68■■■□□ 2.18
PVT1-219ENST00000523427 ADAM12O43184 909 aa28.68■■■□□ 2.18
PVT1-219ENST00000523427 EPB41L2O43491 1005 aaKnown RBP28.68■■■□□ 2.18
PVT1-219ENST00000523427 PAPLNO95428 1278 aa28.68■■■□□ 2.18
PVT1-219ENST00000523427 ZC3H14Q6PJT7 736 aaKnown RBP28.68■■■□□ 2.18
PVT1-219ENST00000523427 ZBTB8OSQ8IWT0 167 aa28.68■■■□□ 2.18
PVT1-219ENST00000523427 DCLK2Q8N568 766 aa28.68■■■□□ 2.18
PVT1-219ENST00000523427 NECAB1Q8N987 351 aa28.68■■■□□ 2.18
PVT1-219ENST00000523427 PJA1Q8NG27 643 aa28.68■■■□□ 2.18
PVT1-219ENST00000523427 LNX1Q8TBB1 728 aaPredicted RBP28.68■■■□□ 2.18
PVT1-219ENST00000523427 PRMT7Q9NVM4 692 aaPredicted RBP28.68■■■□□ 2.18
PVT1-219ENST00000523427 DCHS1Q96JQ0 3298 aa28.67■■■□□ 2.18
PVT1-219ENST00000523427 NEMFO60524 1076 aa28.67■■■□□ 2.18
PVT1-219ENST00000523427 ATP2B1P20020 1258 aa28.67■■■□□ 2.18
PVT1-219ENST00000523427 NOSTRINQ8IVI9 506 aa28.67■■■□□ 2.18
PVT1-219ENST00000523427 ITFG1Q8TB96 612 aa28.67■■■□□ 2.18
PVT1-219ENST00000523427 PIK3R5Q8WYR1 880 aa28.67■■■□□ 2.18
PVT1-219ENST00000523427 FGF13Q92913 245 aa28.67■■■□□ 2.18
PVT1-219ENST00000523427 TNFRSF25Q93038 417 aa28.67■■■□□ 2.18
PVT1-219ENST00000523427 SHDQ96IW2 340 aa28.67■■■□□ 2.18
PVT1-219ENST00000523427 ZFP37Q9Y6Q3 630 aaPredicted RBP28.67■■■□□ 2.18
PVT1-219ENST00000523427 PTGESO14684 152 aa28.66■■■□□ 2.18
PVT1-219ENST00000523427 RECQL4O94761 1208 aa28.66■■■□□ 2.18
PVT1-219ENST00000523427 THP07101 528 aa28.66■■■□□ 2.18
PVT1-219ENST00000523427 FDPSP14324 419 aaKnown RBP28.66■■■□□ 2.18
PVT1-219ENST00000523427 SLC7A14Q8TBB6 771 aa28.66■■■□□ 2.18
PVT1-219ENST00000523427 KXD1Q9BQD3 176 aa28.66■■■□□ 2.18
PVT1-219ENST00000523427 CACNA1IQ9P0X4 2223 aa28.65■■■□□ 2.18
PVT1-219ENST00000523427 BTBD18B2RXH4 712 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms