RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 ZNF200P98182 395 aaPredicted RBP7.46□□□□□ -1.22
VPS13B-211ENST00000522802 CLCQ05315 142 aa7.46□□□□□ -1.22
VPS13B-211ENST00000522802 BAATQ14032 418 aaPredicted RBP7.46□□□□□ -1.22
VPS13B-211ENST00000522802 KCTD1Q719H9 257 aa7.46□□□□□ -1.22
VPS13B-211ENST00000522802 ARMCX6Q7L4S7 300 aa7.46□□□□□ -1.22
VPS13B-211ENST00000522802 SESTD1Q86VW0 696 aa7.46□□□□□ -1.22
VPS13B-211ENST00000522802 ZDHHC13Q8IUH4 622 aa7.46□□□□□ -1.22
VPS13B-211ENST00000522802 SHKBP1Q8TBC3 707 aa7.46□□□□□ -1.22
VPS13B-211ENST00000522802 AFG1LQ8WV93 481 aa7.46□□□□□ -1.22
VPS13B-211ENST00000522802 MKL1Q969V6 931 aa7.46□□□□□ -1.22
VPS13B-211ENST00000522802 GPRASP2Q96D09 838 aa7.46□□□□□ -1.22
VPS13B-211ENST00000522802 YME1L1Q96TA2 773 aa7.46□□□□□ -1.22
VPS13B-211ENST00000522802 PUS7LQ9H0K6 701 aaKnown RBP7.46□□□□□ -1.22
VPS13B-211ENST00000522802 MKNK2Q9HBH9 465 aa7.46□□□□□ -1.22
VPS13B-211ENST00000522802 PAG1Q9NWQ8 432 aa7.46□□□□□ -1.22
VPS13B-211ENST00000522802 GTF2IRD1Q9UHL9 959 aa7.46□□□□□ -1.22
VPS13B-211ENST00000522802 CD207Q9UJ71 328 aa7.46□□□□□ -1.22
VPS13B-211ENST00000522802 SYNPO2Q9UMS6 1093 aa7.46□□□□□ -1.22
VPS13B-211ENST00000522802 PCDHB14Q9Y5E9 798 aa7.46□□□□□ -1.22
VPS13B-211ENST00000522802 PLXNA4Q9HCM2 1894 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 GSG1L2A8MUP6 293 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 WDR64B1ANS9 1081 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 KPNA6O60684 536 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 PARNO95453 639 aaKnown RBP7.45□□□□□ -1.22
VPS13B-211ENST00000522802 TXNP10599 105 aaKnown RBP7.45□□□□□ -1.22
VPS13B-211ENST00000522802 MCCP23508 829 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 EDNRBP24530 442 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 AVPR2P30518 371 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 MCM4P33991 863 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 SLC1A4P43007 532 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 ID4P47928 161 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 SIGLEC14Q08ET2 396 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 COL9A2Q14055 689 aaPredicted RBP7.45□□□□□ -1.22
VPS13B-211ENST00000522802 PKN1Q16512 942 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 BRDTQ58F21 947 aaPredicted RBP7.45□□□□□ -1.22
VPS13B-211ENST00000522802 CEP85Q6P2H3 762 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 FAM160B2Q86V87 743 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 MFSD2AQ8NA29 543 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 SMRP1Q8NCR6 262 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 DBF4BQ8NFT6 615 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 GIMAP7Q8NHV1 300 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 SCFD2Q8WU76 684 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 STAG1Q8WVM7 1258 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 MSLNLQ96KJ4 702 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 SAMD11Q96NU1 681 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 DUSP23Q9BVJ7 150 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 KRTAP9-9Q9BYP9 154 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 KRTAP9-4Q9BYQ2 154 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 INCENPQ9NQS7 918 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 HDAC6Q9UBN7 1215 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 ADD3Q9UEY8 706 aaKnown RBP7.45□□□□□ -1.22
VPS13B-211ENST00000522802 INPP5FQ9Y2H2 1132 aa7.45□□□□□ -1.22
VPS13B-211ENST00000522802 CHD6Q8TD26 2715 aa7.44□□□□□ -1.22
VPS13B-211ENST00000522802 CACNA1GO43497 2377 aa7.44□□□□□ -1.22
VPS13B-211ENST00000522802 TPRP12270 2363 aaKnown RBP7.44□□□□□ -1.22
VPS13B-211ENST00000522802 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.44□□□□□ -1.22
VPS13B-211ENST00000522802 PTPDC1A2A3K4 754 aa7.44□□□□□ -1.22
VPS13B-211ENST00000522802 PRR19A6NJB7 356 aa7.44□□□□□ -1.22
VPS13B-211ENST00000522802 FAM170BA6NMN3 283 aa7.44□□□□□ -1.22
VPS13B-211ENST00000522802 UPK3BL1B0FP48 263 aa7.44□□□□□ -1.22
VPS13B-211ENST00000522802 UPK3BL2E5RIL1 263 aa7.44□□□□□ -1.22
VPS13B-211ENST00000522802 NKRFO15226 690 aaKnown RBP eCLIP7.44□□□□□ -1.22
VPS13B-211ENST00000522802 DNAJA2O60884 412 aa7.44□□□□□ -1.22
VPS13B-211ENST00000522802 ICAM1P05362 532 aa7.44□□□□□ -1.22
VPS13B-211ENST00000522802 CALML3P27482 149 aa7.44□□□□□ -1.22
VPS13B-211ENST00000522802 SOX9P48436 509 aa7.44□□□□□ -1.22
VPS13B-211ENST00000522802 NDUFV1P49821 464 aa7.44□□□□□ -1.22
VPS13B-211ENST00000522802 CYP27A1Q02318 531 aa7.44□□□□□ -1.22
VPS13B-211ENST00000522802 ARHGAP1Q07960 439 aa7.44□□□□□ -1.22
VPS13B-211ENST00000522802 CBX2Q14781 532 aaPredicted RBP7.44□□□□□ -1.22
VPS13B-211ENST00000522802 UBE3CQ15386 1083 aa7.44□□□□□ -1.22
VPS13B-211ENST00000522802 SBK1Q52WX2 424 aa7.44□□□□□ -1.22
VPS13B-211ENST00000522802 PRAMEF13Q5VWM6 474 aa7.44□□□□□ -1.22
VPS13B-211ENST00000522802 GK5Q6ZS86 529 aa7.44□□□□□ -1.22
VPS13B-211ENST00000522802 FRMD5Q7Z6J6 570 aa7.44□□□□□ -1.22
VPS13B-211ENST00000522802 ADGRD2Q7Z7M1 963 aa7.44□□□□□ -1.22
VPS13B-211ENST00000522802 ERC1Q8IUD2 1116 aa7.44□□□□□ -1.22
VPS13B-211ENST00000522802 CLEC4DQ8WXI8 215 aa7.44□□□□□ -1.22
VPS13B-211ENST00000522802 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.44□□□□□ -1.221e-6■■□□□ 12.2
VPS13B-211ENST00000522802 BOLA2Q9H3K6 86 aa7.44□□□□□ -1.22
VPS13B-211ENST00000522802 CLEC1BQ9P126 229 aa7.44□□□□□ -1.22
VPS13B-211ENST00000522802 BARX2Q9UMQ3 279 aaPredicted RBP7.44□□□□□ -1.22
VPS13B-211ENST00000522802 USP15Q9Y4E8 981 aaPredicted RBP7.44□□□□□ -1.22
VPS13B-211ENST00000522802 CEP250Q9BV73 2442 aa7.44□□□□□ -1.22
VPS13B-211ENST00000522802 ACACBO00763 2458 aa7.44□□□□□ -1.22
VPS13B-211ENST00000522802 EP300Q09472 2414 aaPredicted RBP7.43□□□□□ -1.22
VPS13B-211ENST00000522802 MYH7BA7E2Y1 1941 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 SLC22A31A6NKX4 558 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 CHURC1-FNTBB4DL54 471 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 C5orf67F2Z3F1 127 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 IPO8O15397 1037 aaKnown RBP7.43□□□□□ -1.22
VPS13B-211ENST00000522802 NCK2O43639 380 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 NMT2O60551 498 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 LEFTY1O75610 366 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 EYA4O95677 639 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 GLP2RO95838 553 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 F2P00734 622 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 FAM87AP0C7U9 286 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 DNAJB1P25685 340 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 SLC16A2P36021 539 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms