RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 ADH1AP07327 375 aa11.29□□□□□ -0.6
CTNNA1-235ENST00000522730 U2AF2P26368 475 aaKnown RBP eCLIP11.29□□□□□ -0.6
CTNNA1-235ENST00000522730 NAMPTP43490 491 aa11.29□□□□□ -0.6
CTNNA1-235ENST00000522730 PEX3P56589 373 aa11.29□□□□□ -0.6
CTNNA1-235ENST00000522730 DSC1Q08554 894 aa11.29□□□□□ -0.6
CTNNA1-235ENST00000522730 SIGLEC14Q08ET2 396 aa11.29□□□□□ -0.6
CTNNA1-235ENST00000522730 PPP2R5AQ15172 486 aa11.29□□□□□ -0.6
CTNNA1-235ENST00000522730 RABEP1Q15276 862 aa11.29□□□□□ -0.6
CTNNA1-235ENST00000522730 IL17AQ16552 155 aa11.29□□□□□ -0.6
CTNNA1-235ENST00000522730 USP41Q3LFD5 358 aa11.29□□□□□ -0.6
CTNNA1-235ENST00000522730 KIAA0319Q5VV43 1072 aa11.29□□□□□ -0.6
CTNNA1-235ENST00000522730 EEF1DP3Q658K8 133 aa11.29□□□□□ -0.6
CTNNA1-235ENST00000522730 CDCA2Q69YH5 1023 aaPredicted RBP11.29□□□□□ -0.6
CTNNA1-235ENST00000522730 GPR149Q86SP6 731 aa11.29□□□□□ -0.6
CTNNA1-235ENST00000522730 ALYREFQ86V81 257 aaKnown RBP11.29□□□□□ -0.6
CTNNA1-235ENST00000522730 GSTCDQ8NEC7 633 aa11.29□□□□□ -0.6
CTNNA1-235ENST00000522730 ACSF2Q96CM8 615 aaPredicted RBP11.29□□□□□ -0.6
CTNNA1-235ENST00000522730 PRIMPOLQ96LW4 560 aa11.29□□□□□ -0.6
CTNNA1-235ENST00000522730 ADPGKQ9BRR6 497 aa11.29□□□□□ -0.6
CTNNA1-235ENST00000522730 CXCL16Q9H2A7 254 aa11.29□□□□□ -0.6
CTNNA1-235ENST00000522730 SFXN1Q9H9B4 322 aa11.29□□□□□ -0.6
CTNNA1-235ENST00000522730 PIDD1Q9HB75 910 aa11.29□□□□□ -0.6
CTNNA1-235ENST00000522730 KIF3AQ9Y496 699 aa11.29□□□□□ -0.6
CTNNA1-235ENST00000522730 SFI1A8K8P3 1242 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 INPPL1O15357 1258 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 RFPL2O75678 378 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 RECQL4O94761 1208 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 BRD1O95696 1058 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 GLUD1P00367 558 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 PDGFBP01127 241 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 EDN1P05305 212 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 THP07101 528 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 GJB2P29033 226 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 EFNA5P52803 228 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 OSTNP61366 133 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 DSG1Q02413 1049 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 RAD51AP2Q09MP3 1159 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 GRIK3Q13003 919 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 MTMR3Q13615 1198 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 HSP90AA2PQ14568 343 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 FAM187BQ17R55 369 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 NT5DC1Q5TFE4 455 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 FAM171A1Q5VUB5 890 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 FUT10Q6P4F1 479 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 ELMSAN1Q6PJG2 1045 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 PRSS55Q6UWB4 352 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 CCDC149Q6ZUS6 474 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 BMP8AQ7Z5Y6 402 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 FBXL6Q8N531 539 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 KIFAP3Q92845 792 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 TMX3Q96JJ7 454 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 TCHPQ9BT92 498 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 ADAM28Q9UKQ2 775 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 SORCS3Q9UPU3 1222 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 ZDBF2Q9HCK1 2354 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 ARID2Q68CP9 1835 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 PIEZO1Q92508 2521 aa11.28□□□□□ -0.6
CTNNA1-235ENST00000522730 HIP1RO75146 1068 aa11.27□□□□□ -0.61
CTNNA1-235ENST00000522730 MUTP22033 750 aa11.27□□□□□ -0.61
CTNNA1-235ENST00000522730 GBP2P32456 591 aaPredicted RBP11.27□□□□□ -0.61
CTNNA1-235ENST00000522730 TUSC3Q13454 348 aa11.27□□□□□ -0.61
CTNNA1-235ENST00000522730 GLRA4Q5JXX5 417 aa11.27□□□□□ -0.61
CTNNA1-235ENST00000522730 ATF7IP2Q5U623 682 aa11.27□□□□□ -0.61
CTNNA1-235ENST00000522730 OTOP3Q7RTS5 596 aa11.27□□□□□ -0.61
CTNNA1-235ENST00000522730 ZDHHC14Q8IZN3 488 aa11.27□□□□□ -0.61
CTNNA1-235ENST00000522730 ST13P5Q8NFI4 369 aaPredicted RBP11.27□□□□□ -0.61
CTNNA1-235ENST00000522730 RNF25Q96BH1 459 aaPredicted RBP11.27□□□□□ -0.61
CTNNA1-235ENST00000522730 RUSC1Q9BVN2 902 aa11.27□□□□□ -0.61
CTNNA1-235ENST00000522730 CCDC113Q9H0I3 377 aa11.27□□□□□ -0.61
CTNNA1-235ENST00000522730 RXFP1Q9HBX9 757 aa11.27□□□□□ -0.61
CTNNA1-235ENST00000522730 KMT5AQ9NQR1 393 aa11.27□□□□□ -0.61
CTNNA1-235ENST00000522730 CHST7Q9NS84 486 aa11.27□□□□□ -0.61
CTNNA1-235ENST00000522730 DPP7Q9UHL4 492 aa11.27□□□□□ -0.61
CTNNA1-235ENST00000522730 SMC3Q9UQE7 1217 aa11.27□□□□□ -0.61
CTNNA1-235ENST00000522730 STK24Q9Y6E0 443 aa11.27□□□□□ -0.61
CTNNA1-235ENST00000522730 MYO10Q9HD67 2058 aa11.27□□□□□ -0.61
CTNNA1-235ENST00000522730 WDR87Q6ZQQ6 2873 aa11.26□□□□□ -0.61
CTNNA1-235ENST00000522730 VWA3AA6NCI4 1184 aa11.26□□□□□ -0.61
CTNNA1-235ENST00000522730 PTGESO14684 152 aa11.26□□□□□ -0.61
CTNNA1-235ENST00000522730 SLC16A4O15374 487 aa11.26□□□□□ -0.61
CTNNA1-235ENST00000522730 TGM5O43548 720 aa11.26□□□□□ -0.61
CTNNA1-235ENST00000522730 KIF4AO95239 1232 aa11.26□□□□□ -0.61
CTNNA1-235ENST00000522730 CD2BP2O95400 341 aaKnown RBP11.26□□□□□ -0.61
CTNNA1-235ENST00000522730 CHRM1P11229 460 aaPredicted RBP11.26□□□□□ -0.61
CTNNA1-235ENST00000522730 HARSP12081 509 aaKnown RBP11.26□□□□□ -0.61
CTNNA1-235ENST00000522730 IGFBP6P24592 240 aaPredicted RBP11.26□□□□□ -0.61
CTNNA1-235ENST00000522730 NPTX2P47972 431 aa11.26□□□□□ -0.61
CTNNA1-235ENST00000522730 VCPP55072 806 aaKnown RBP11.26□□□□□ -0.61
CTNNA1-235ENST00000522730 NHLH1Q02575 133 aa11.26□□□□□ -0.61
CTNNA1-235ENST00000522730 DHX8Q14562 1220 aaKnown RBP11.26□□□□□ -0.61
CTNNA1-235ENST00000522730 DCAF4L1Q3SXM0 396 aa11.26□□□□□ -0.61
CTNNA1-235ENST00000522730 RTP2Q5QGT7 225 aa11.26□□□□□ -0.61
CTNNA1-235ENST00000522730 KCNK18Q7Z418 384 aa11.26□□□□□ -0.61
CTNNA1-235ENST00000522730 UBALD2Q8IYN6 164 aa11.26□□□□□ -0.61
CTNNA1-235ENST00000522730 IGSF22Q8N9C0 903 aa11.26□□□□□ -0.61
CTNNA1-235ENST00000522730 SMG7Q92540 1137 aaKnown RBP11.26□□□□□ -0.61
CTNNA1-235ENST00000522730 ASIC4Q96FT7 647 aa11.26□□□□□ -0.61
CTNNA1-235ENST00000522730 CDK5RAP3Q96JB5 506 aa11.26□□□□□ -0.61
CTNNA1-235ENST00000522730 TBC1D32Q96NH3 1257 aa11.26□□□□□ -0.61
CTNNA1-235ENST00000522730 MFSD1Q9H3U5 465 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms