RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 COA7Q96BR5 231 aa3.37□□□□□ -1.87
CKS1BP7-201ENST00000522230 COG3Q96JB2 828 aa3.37□□□□□ -1.87
CKS1BP7-201ENST00000522230 HIST1H2AHQ96KK5 128 aa3.37□□□□□ -1.87
CKS1BP7-201ENST00000522230 SIGLEC10Q96LC7 697 aa3.37□□□□□ -1.87
CKS1BP7-201ENST00000522230 PWWP2AQ96N64 755 aa3.37□□□□□ -1.87
CKS1BP7-201ENST00000522230 CAMKK2Q96RR4 588 aa3.37□□□□□ -1.87
CKS1BP7-201ENST00000522230 HIST1H2AJQ99878 128 aa3.37□□□□□ -1.87
CKS1BP7-201ENST00000522230 POLR3BQ9NW08 1133 aaPredicted RBP3.37□□□□□ -1.87
CKS1BP7-201ENST00000522230 OBP2AQ9NY56 170 aa3.37□□□□□ -1.87
CKS1BP7-201ENST00000522230 FAM53CQ9NYF3 392 aa3.37□□□□□ -1.87
CKS1BP7-201ENST00000522230 RCAN3Q9UKA8 241 aa3.37□□□□□ -1.87
CKS1BP7-201ENST00000522230 PNMA8BQ9ULN7 279 aaPredicted RBP3.37□□□□□ -1.87
CKS1BP7-201ENST00000522230 DLC1Q96QB1 1528 aa3.37□□□□□ -1.87
CKS1BP7-201ENST00000522230 DIP2AQ14689 1571 aa3.37□□□□□ -1.87
CKS1BP7-201ENST00000522230 ATP7BP35670 1465 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 RGPD8O14715 1765 aaPredicted RBP3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 SLIT1O75093 1534 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 KIF20BQ96Q89 1820 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 A0A0G2JNJ9 132 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 A6NNZ2 444 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 HTRA2O43464 458 aaPredicted RBP3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 SEC24DO94855 1032 aaPredicted RBP3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 KLHL18O94889 574 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 LY86O95711 162 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 C1QTNF9P0C862 333 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 ZNF888P0CJ79 500 aaPredicted RBP3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 MTHFD2P13995 350 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 GSPT1P15170 499 aaKnown RBP3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 ZNF28P17035 718 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 ADSLP30566 484 aaPredicted RBP3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 PRKAR2BP31323 418 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 CYP2C19P33261 490 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 SLC5A3P53794 718 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 ADKP55263 362 aaKnown RBP3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 ADAM15Q13444 863 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 TOP3AQ13472 1001 aaPredicted RBP3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 DCTN1Q14203 1278 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 GALEQ14376 348 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 SEPT2Q15019 361 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 NOMO1Q15155 1222 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 MAP9Q49MG5 647 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 C20orf194Q5TEA3 1177 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 MCTP2Q6DN12 878 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 MCTP1Q6DN14 999 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 CXorf57Q6NSI4 855 aaKnown RBP3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 B3GNT9Q6UX72 402 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 DPP8Q6V1X1 898 aaPredicted RBP3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 BMP8AQ7Z5Y6 402 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 COL23A1Q86Y22 540 aaPredicted RBP3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 MIER2Q8N344 545 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 TCP11L2Q8N4U5 519 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 MSL3Q8N5Y2 521 aaKnown RBP3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 TTLL6Q8N841 843 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 GLB1L3Q8NCI6 653 aaPredicted RBP3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 EXOC6Q8TAG9 804 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 HAPLN2Q9GZV7 340 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 WNT8AQ9H1J5 351 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 SAE1Q9UBE0 346 aaPredicted RBP3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 POLKQ9UBT6 870 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 Q9UFV3 132 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 SAP30BPQ9UHR5 308 aaKnown RBP3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 INTUQ9ULD6 942 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 SYNPO2Q9UMS6 1093 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 SMG5Q9UPR3 1016 aaKnown RBP3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 TNNQ9UQP3 1299 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 KCTD3Q9Y597 815 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 PCDHA13Q9Y5I0 950 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 CDC42BPGQ6DT37 1551 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 TTC21BQ7Z4L5 1316 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 MAPK8IP3Q9UPT6 1336 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 KNDC1Q76NI1 1749 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 FAM135BQ49AJ0 1406 aa3.36□□□□□ -1.87
CKS1BP7-201ENST00000522230 MED14O60244 1454 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 USP32Q8NFA0 1604 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 CCDC194A0A1B0GVG4 234 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 LRRC14BA6NHZ5 514 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 FFAR3O14843 346 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 ADCY6O43306 1168 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 PRAMEF4O60810 478 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 CUTAO60888 179 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 BCAR3O75815 825 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 HMGCRP04035 888 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 POU2F2P09086 479 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 PDCP20941 246 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 MCAMP43121 646 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 AMPHP49418 695 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 RRP1P56182 461 aaKnown RBP3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 MALLQ13021 153 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 PCOLCEQ15113 449 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 TBR1Q16650 682 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 GFOD2Q3B7J2 385 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 ARHGAP29Q52LW3 1261 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 LMBR1LQ6UX01 489 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 BTNL9Q6UXG8 535 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 KSR2Q6VAB6 950 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 ZBTB34Q8NCN2 500 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 FRAT1Q92837 279 aaPredicted RBP3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 NKD2Q969F2 451 aaPredicted RBP3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 HPS3Q969F9 1004 aa3.35□□□□□ -1.87
CKS1BP7-201ENST00000522230 RUNDC1Q96C34 613 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms